| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243575
Identifier: 21243575
GI number: 21243575
Start: 3340291
End: 3341382
Strand: Reverse
Name: 21243575
Synonym: XAC2848
Alternate gene names: NA
Gene position: 3341382-3340291 (Counterclockwise)
Preceding gene: 21243576
Following gene: 21243574
Centisome position: 64.56
GC content: 66.67
Gene sequence:
>1092_bases ATGGCCAAGAAAACCCTGATTCCGCATAGCGTCCGGCTTGAATTCGCGCCCGGTGCGCTGGTGCACAGCAATCTGTCCGG CGCCGCCTTCACCGACGATTGGCTGTGGGTGGCCGGCGACGAAGCCTGCGCGGTAGACCGGCTGCGCAAGCTCGACCCCG TACAGCGGGAGGCGCTGCGCTTCGGCCAGGGGCAGAGCTTTGCGTTGGCGAACCTGCTCGATCTGCCGGGAGAAGACGGC GAGGAGGCGGACCTGGAAGGTATGGGCCTGTCGGACGGATTTTTGTGGGTCATCGGTTCGCACGGCAGCAAACGCAAGAA CGCCAAGCGCGGCCGCGACGACGCCGAAAACGCCAAACGCCTGACCAAGTTGAAGCTCGATGCCAATCGCCGCCTGTTGG CCTGCCTGCCCATCGACTATGCGCAAGACGGCACCCCGCAGCTGGTACGCGAAGCGGCCGACGGCCGCCGTGCGCTGCGG CTCAAGGGCGACGCCAAGCACAACCAGCTCACCGACCTGCTGGCCGACGACCCGCATTTCGGTCCGTTCCTGAAGATCCC CGGCAAGGACAACGGCTTCGATATCGAAGGCATCGTGGTCGATGGCCAGCGCTTGCTATTGGGGCTGCGCGGGCCGGTGC TGCGTGGCTGGACGGCACTGCTGGAGATCCAGGTGCAAGCCCACGGCGACCACCTGCGCCTGGTCCCGCTGGACGAGGAC GGCACCCTGCTGCGCAAGCACTTCCTGCAACTGGGCGGGCTGGGCGTACGCGACCTGCATTATTCCGGCGACGATCTGTA CCTGCTGGCCGGGCCGACGATGGTCCTGAACGGCGAAATCCGCCTGTTCAAATGGCCGGATGCGCGCACCGTGCTGGCCG CCAACCGCGCACCGGTGCGCTTTCAGCACGACCTGCTGGAATCGGCAGTGCTGCCGCATGGCAAGGACTGCGACCGCGCC GAGGCCATCTGCAACCTGCCCAGACACCTGGCCGGCAAGATTCCCACCTGGCTGGTGCTGTACGACGCTCCGGGCACGGC ACGCAGCGGCGGCGATTGCGTGGTGTACGGCGACCTGCTGCGCAACCGCTGA
Upstream 100 bases:
>100_bases GCGCAGGTGGCCAACGACCGCGATTGGCCGGGGCAGTTGGCGCCCGATGTGACGCATGCCAAGCTGGTCGCGTTCGGTTG ATCCCTCGTCCCAGGTACCC
Downstream 100 bases:
>100_bases GCCACGGGCCGGGCAGGGCCACGCTGCGCAAGGTAAAATCGGGCGACTCCCGTTTTGCCGAGCGCTCCATGACCTGCCGC ACCCGTTTCGCTCCCAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MAKKTLIPHSVRLEFAPGALVHSNLSGAAFTDDWLWVAGDEACAVDRLRKLDPVQREALRFGQGQSFALANLLDLPGEDG EEADLEGMGLSDGFLWVIGSHGSKRKNAKRGRDDAENAKRLTKLKLDANRRLLACLPIDYAQDGTPQLVREAADGRRALR LKGDAKHNQLTDLLADDPHFGPFLKIPGKDNGFDIEGIVVDGQRLLLGLRGPVLRGWTALLEIQVQAHGDHLRLVPLDED GTLLRKHFLQLGGLGVRDLHYSGDDLYLLAGPTMVLNGEIRLFKWPDARTVLAANRAPVRFQHDLLESAVLPHGKDCDRA EAICNLPRHLAGKIPTWLVLYDAPGTARSGGDCVVYGDLLRNR
Sequences:
>Translated_363_residues MAKKTLIPHSVRLEFAPGALVHSNLSGAAFTDDWLWVAGDEACAVDRLRKLDPVQREALRFGQGQSFALANLLDLPGEDG EEADLEGMGLSDGFLWVIGSHGSKRKNAKRGRDDAENAKRLTKLKLDANRRLLACLPIDYAQDGTPQLVREAADGRRALR LKGDAKHNQLTDLLADDPHFGPFLKIPGKDNGFDIEGIVVDGQRLLLGLRGPVLRGWTALLEIQVQAHGDHLRLVPLDED GTLLRKHFLQLGGLGVRDLHYSGDDLYLLAGPTMVLNGEIRLFKWPDARTVLAANRAPVRFQHDLLESAVLPHGKDCDRA EAICNLPRHLAGKIPTWLVLYDAPGTARSGGDCVVYGDLLRNR >Mature_362_residues AKKTLIPHSVRLEFAPGALVHSNLSGAAFTDDWLWVAGDEACAVDRLRKLDPVQREALRFGQGQSFALANLLDLPGEDGE EADLEGMGLSDGFLWVIGSHGSKRKNAKRGRDDAENAKRLTKLKLDANRRLLACLPIDYAQDGTPQLVREAADGRRALRL KGDAKHNQLTDLLADDPHFGPFLKIPGKDNGFDIEGIVVDGQRLLLGLRGPVLRGWTALLEIQVQAHGDHLRLVPLDEDG TLLRKHFLQLGGLGVRDLHYSGDDLYLLAGPTMVLNGEIRLFKWPDARTVLAANRAPVRFQHDLLESAVLPHGKDCDRAE AICNLPRHLAGKIPTWLVLYDAPGTARSGGDCVVYGDLLRNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39868; Mature: 39737
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKTLIPHSVRLEFAPGALVHSNLSGAAFTDDWLWVAGDEACAVDRLRKLDPVQREALR CCCCCCCCCEEEEEECCCEEEECCCCCCEECCCEEEEECCCHHHHHHHHHCCHHHHHHHH FGQGQSFALANLLDLPGEDGEEADLEGMGLSDGFLWVIGSHGSKRKNAKRGRDDAENAKR CCCCCCEEHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHCCCCHHHHHHH LTKLKLDANRRLLACLPIDYAQDGTPQLVREAADGRRALRLKGDAKHNQLTDLLADDPHF HEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCC GPFLKIPGKDNGFDIEGIVVDGQRLLLGLRGPVLRGWTALLEIQVQAHGDHLRLVPLDED CCEEECCCCCCCEEEEEEEECCCEEEEECCCCHHHCEEEEEEEEEEECCCEEEEEEECCC GTLLRKHFLQLGGLGVRDLHYSGDDLYLLAGPTMVLNGEIRLFKWPDARTVLAANRAPVR CHHHHHHHHHHCCCCEEEEEECCCEEEEEECCEEEEECEEEEEECCCCCEEEECCCCCCC FQHDLLESAVLPHGKDCDRAEAICNLPRHLAGKIPTWLVLYDAPGTARSGGDCVVYGDLL HHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHCCCCEEEEEECCCCCCCCCCCEEEEHHHH RNR CCC >Mature Secondary Structure AKKTLIPHSVRLEFAPGALVHSNLSGAAFTDDWLWVAGDEACAVDRLRKLDPVQREALR CCCCCCCCEEEEEECCCEEEECCCCCCEECCCEEEEECCCHHHHHHHHHCCHHHHHHHH FGQGQSFALANLLDLPGEDGEEADLEGMGLSDGFLWVIGSHGSKRKNAKRGRDDAENAKR CCCCCCEEHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHCCCCHHHHHHH LTKLKLDANRRLLACLPIDYAQDGTPQLVREAADGRRALRLKGDAKHNQLTDLLADDPHF HEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCC GPFLKIPGKDNGFDIEGIVVDGQRLLLGLRGPVLRGWTALLEIQVQAHGDHLRLVPLDED CCEEECCCCCCCEEEEEEEECCCEEEEECCCCHHHCEEEEEEEEEEECCCEEEEEEECCC GTLLRKHFLQLGGLGVRDLHYSGDDLYLLAGPTMVLNGEIRLFKWPDARTVLAANRAPVR CHHHHHHHHHHCCCCEEEEEECCCEEEEEECCEEEEECEEEEEECCCCCEEEECCCCCCC FQHDLLESAVLPHGKDCDRAEAICNLPRHLAGKIPTWLVLYDAPGTARSGGDCVVYGDLL HHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHCCCCEEEEEECCCCCCCCCCCEEEEHHHH RNR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA