| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243503
Identifier: 21243503
GI number: 21243503
Start: 3254646
End: 3256181
Strand: Direct
Name: 21243503
Synonym: XAC2776
Alternate gene names: NA
Gene position: 3254646-3256181 (Clockwise)
Preceding gene: 21243501
Following gene: 21243510
Centisome position: 62.88
GC content: 68.55
Gene sequence:
>1536_bases ATGCCGATTTTCGATCCCGCCCGCCGCCAGGTTCTCAAGGGCAGTGCTGCCGTCATGGCCGCCGGCGCCCTTGGCAGCTT GAGCGCGCTGCAGTCGCGCCAGGCCCAGGCCGCCACCTCGCCCTCCACGCAACTTGCACCGGTCCCGAGCCGGTACGGCC CACTCGCCCCGGTCGCCGACCAGAGCACCGGTTTGCCACTGCTGCAGCTGCCACAGGGTTTCAGCTATCGCTCGTTCGGC TGGAGCGGCGACCGCATGGACGACGGCCAGCCCTGCCCCGACCGACATGACGGCATGGCCGTGGTCGGCCTGCGCCGACC CGACTGGCGTCCCGGCAGCGACCCGTTGCGCGGCCTGGAATACGTGCTGATCCGCAACCACGAACGCGGCGCGGGCAGCC CGTTCCGCGCCCCGGCGATGTACGACACCGGCACCGTCAGCGGTACTCAACAGGCCGGCGGCGGCACCACCACGCTCAGT TATGGCCGGCGCGGCTGGGGCAGCCTGGAGCCGAGCCTGGGCGGCACGCTGGTCAACTGCGCCGGCGGCCCTACGCCATG GGGCACCTGGCTGAGCTGCGAAGAGATCAAGACCAATGCGGTCTCCAGCACCGGCCGCAAGCATGGCTATGTGTTCGAGG TGGACCCGGACAGCCACCGCACCACCGGCCGCCCGCTGGTGGGACTTGGCCGTTTCAGCCACGAAGCGGTGGCGGTCGAT CCGCGCACCGGTATCGTCTATCTCACCGAAGACGACCGCAACAAGGCCGGCCTGTACCGCTTCGTTCCCAACGACCGCCG CGGCCGCAACGGCTCGCTGGAAAACGGCGGGCGATTACAAGCCGCGCGCGTGCGCGGGCGCCGCAATGCCGACCTCACCG TGGCCAGCATCGGCCAGCAATTCCAGCTCGAATGGGTGGATATCTCCGAGCCCGACCTGGACAGCATCGCCGCGCCGGCC GGCTTTGCCGATATCGGCGCCAACGACACCCTGAGCGGCCCGTTCGCACAGGCCTGGGCCGATGGCGCGCTGCGCATGAG CCGCGGCGAAGGCATCTGGTACAGCTACGGCAAGATGTTCATCGTCGACACCAGCACCGGCGTGGATGCGCAGGGTCGTC GCGGTTACGGCAACGGTGCGGTGTGGGTGCTGGACCTGTTTACCCAACGCCTGAGCGCGCTGTTCGTCAGCGGCAATCAG CTGGCCGCGCACAATCCGGACAATGTGACGGTGAGTGCGCGCGGCGGCGTGGTGTTGTGCGAAGACGGCGGCGAAAGCCC GGACGAATACGGCCCTGGCGCGCGTCTGCTCGGCCTGACGCGCAACGGCCAGTCGTTCTATCTGGCCAAGAACAACGTAC AGCTGACCTCGCAGCAGATTGCCGATGCCGGCAAGACCATTGCCGAAGGCGACTACCGCGACACCGAGTTCTGCGGCGCG TGCTGGGACCCGTTGGCGCGCACATTGTTCGTCAACATCCAGACGCCGGGCATCACCCTGGCCATCACCGGGCCGTGGGA ACGCGGACCGCTGTAA
Upstream 100 bases:
>100_bases CAGCCCGGGCAGCCCGCGGCGATTTGTCACTGCGTGTCATGGTGTGGTTACAGCTGGCAATTAGTGTCGCCCGACCACCC AGCCACGCAGGAGTCGTTCG
Downstream 100 bases:
>100_bases CCGCATGGCGCCACGCGCCGGCGGTGTGCATGCCCCGAACGGCGCGTGGCTCAGGAATGCACGACGCCGGCCGATTGCGC AGCGAACGTCCCAAACGATA
Product: hypothetical protein
Products: NA
Alternate protein names: WD40 Domain-Containing Protein Beta Propeller; Twin-Arginine Translocation Pathway Signal; Twin-Arginine Translocation Pathway Signal Protein; Phosphatase; Tat Pathway Signal Sequence Domain Protein; WD40 Domain-Containing Protein; LB Protein; WD40 Domain Protein Beta Propeller; DTDP-Glucose 4 6-Dehydratase; Signal Peptide
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MPIFDPARRQVLKGSAAVMAAGALGSLSALQSRQAQAATSPSTQLAPVPSRYGPLAPVADQSTGLPLLQLPQGFSYRSFG WSGDRMDDGQPCPDRHDGMAVVGLRRPDWRPGSDPLRGLEYVLIRNHERGAGSPFRAPAMYDTGTVSGTQQAGGGTTTLS YGRRGWGSLEPSLGGTLVNCAGGPTPWGTWLSCEEIKTNAVSSTGRKHGYVFEVDPDSHRTTGRPLVGLGRFSHEAVAVD PRTGIVYLTEDDRNKAGLYRFVPNDRRGRNGSLENGGRLQAARVRGRRNADLTVASIGQQFQLEWVDISEPDLDSIAAPA GFADIGANDTLSGPFAQAWADGALRMSRGEGIWYSYGKMFIVDTSTGVDAQGRRGYGNGAVWVLDLFTQRLSALFVSGNQ LAAHNPDNVTVSARGGVVLCEDGGESPDEYGPGARLLGLTRNGQSFYLAKNNVQLTSQQIADAGKTIAEGDYRDTEFCGA CWDPLARTLFVNIQTPGITLAITGPWERGPL
Sequences:
>Translated_511_residues MPIFDPARRQVLKGSAAVMAAGALGSLSALQSRQAQAATSPSTQLAPVPSRYGPLAPVADQSTGLPLLQLPQGFSYRSFG WSGDRMDDGQPCPDRHDGMAVVGLRRPDWRPGSDPLRGLEYVLIRNHERGAGSPFRAPAMYDTGTVSGTQQAGGGTTTLS YGRRGWGSLEPSLGGTLVNCAGGPTPWGTWLSCEEIKTNAVSSTGRKHGYVFEVDPDSHRTTGRPLVGLGRFSHEAVAVD PRTGIVYLTEDDRNKAGLYRFVPNDRRGRNGSLENGGRLQAARVRGRRNADLTVASIGQQFQLEWVDISEPDLDSIAAPA GFADIGANDTLSGPFAQAWADGALRMSRGEGIWYSYGKMFIVDTSTGVDAQGRRGYGNGAVWVLDLFTQRLSALFVSGNQ LAAHNPDNVTVSARGGVVLCEDGGESPDEYGPGARLLGLTRNGQSFYLAKNNVQLTSQQIADAGKTIAEGDYRDTEFCGA CWDPLARTLFVNIQTPGITLAITGPWERGPL >Mature_510_residues PIFDPARRQVLKGSAAVMAAGALGSLSALQSRQAQAATSPSTQLAPVPSRYGPLAPVADQSTGLPLLQLPQGFSYRSFGW SGDRMDDGQPCPDRHDGMAVVGLRRPDWRPGSDPLRGLEYVLIRNHERGAGSPFRAPAMYDTGTVSGTQQAGGGTTTLSY GRRGWGSLEPSLGGTLVNCAGGPTPWGTWLSCEEIKTNAVSSTGRKHGYVFEVDPDSHRTTGRPLVGLGRFSHEAVAVDP RTGIVYLTEDDRNKAGLYRFVPNDRRGRNGSLENGGRLQAARVRGRRNADLTVASIGQQFQLEWVDISEPDLDSIAAPAG FADIGANDTLSGPFAQAWADGALRMSRGEGIWYSYGKMFIVDTSTGVDAQGRRGYGNGAVWVLDLFTQRLSALFVSGNQL AAHNPDNVTVSARGGVVLCEDGGESPDEYGPGARLLGLTRNGQSFYLAKNNVQLTSQQIADAGKTIAEGDYRDTEFCGAC WDPLARTLFVNIQTPGITLAITGPWERGPL
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54531; Mature: 54400
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIFDPARRQVLKGSAAVMAAGALGSLSALQSRQAQAATSPSTQLAPVPSRYGPLAPVAD CCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCC QSTGLPLLQLPQGFSYRSFGWSGDRMDDGQPCPDRHDGMAVVGLRRPDWRPGSDPLRGLE CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHCCEE YVLIRNHERGAGSPFRAPAMYDTGTVSGTQQAGGGTTTLSYGRRGWGSLEPSLGGTLVNC EEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEC AGGPTPWGTWLSCEEIKTNAVSSTGRKHGYVFEVDPDSHRTTGRPLVGLGRFSHEAVAVD CCCCCCCCCCEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCEEEEC PRTGIVYLTEDDRNKAGLYRFVPNDRRGRNGSLENGGRLQAARVRGRRNADLTVASIGQQ CCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEHHCCCCCCCEEEEECCCE FQLEWVDISEPDLDSIAAPAGFADIGANDTLSGPFAQAWADGALRMSRGEGIWYSYGKMF EEEEEEECCCCCHHHHCCCCCCHHCCCCCCCCCCHHHHHCCCCEEEECCCEEEEECCEEE IVDTSTGVDAQGRRGYGNGAVWVLDLFTQRLSALFVSGNQLAAHNPDNVTVSARGGVVLC EEECCCCCCCCCCCCCCCCCEEHHHHHHHHHHEEEECCCEEEECCCCCEEEEECCCEEEE EDGGESPDEYGPGARLLGLTRNGQSFYLAKNNVQLTSQQIADAGKTIAEGDYRDTEFCGA CCCCCCCHHHCCCCEEEEEEECCCEEEEEECCEEEHHHHHHHCCCCCCCCCCCCCHHHHH CWDPLARTLFVNIQTPGITLAITGPWERGPL HHHHCCEEEEEEEECCCEEEEEECCCCCCCC >Mature Secondary Structure PIFDPARRQVLKGSAAVMAAGALGSLSALQSRQAQAATSPSTQLAPVPSRYGPLAPVAD CCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCC QSTGLPLLQLPQGFSYRSFGWSGDRMDDGQPCPDRHDGMAVVGLRRPDWRPGSDPLRGLE CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHCCEE YVLIRNHERGAGSPFRAPAMYDTGTVSGTQQAGGGTTTLSYGRRGWGSLEPSLGGTLVNC EEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEC AGGPTPWGTWLSCEEIKTNAVSSTGRKHGYVFEVDPDSHRTTGRPLVGLGRFSHEAVAVD CCCCCCCCCCEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCEEEEC PRTGIVYLTEDDRNKAGLYRFVPNDRRGRNGSLENGGRLQAARVRGRRNADLTVASIGQQ CCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEHHCCCCCCCEEEEECCCE FQLEWVDISEPDLDSIAAPAGFADIGANDTLSGPFAQAWADGALRMSRGEGIWYSYGKMF EEEEEEECCCCCHHHHCCCCCCHHCCCCCCCCCCHHHHHCCCCEEEECCCEEEEECCEEE IVDTSTGVDAQGRRGYGNGAVWVLDLFTQRLSALFVSGNQLAAHNPDNVTVSARGGVVLC EEECCCCCCCCCCCCCCCCCEEHHHHHHHHHHEEEECCCEEEECCCCCEEEEECCCEEEE EDGGESPDEYGPGARLLGLTRNGQSFYLAKNNVQLTSQQIADAGKTIAEGDYRDTEFCGA CCCCCCCHHHCCCCEEEEEEECCCEEEEEECCEEEHHHHHHHCCCCCCCCCCCCCHHHHH CWDPLARTLFVNIQTPGITLAITGPWERGPL HHHHCCEEEEEEEECCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA