| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243386
Identifier: 21243386
GI number: 21243386
Start: 3116848
End: 3118215
Strand: Direct
Name: 21243386
Synonym: XAC2657
Alternate gene names: NA
Gene position: 3116848-3118215 (Clockwise)
Preceding gene: 21243385
Following gene: 21243387
Centisome position: 60.22
GC content: 61.7
Gene sequence:
>1368_bases GTGGCCGGGATCGTCGAGCTGGCGACTGAAGACGAAGCCGCTGCAGGTACCGACAAAATCCGCGTCATCACCGCATGGCT GTTGAAGAAGATCTTGGATGCTCGCCTGGGAGCCGGTGCGCCATCAGCGTTCATTCGAGGACTACTGGGCCTGACCAGCG CCGCGCTGCTGCGTACTGCCCTGGAACTGAAGGGAGCCGCCCTCAAGGACGAAGGTGCCGGCAACAATCTGGATGCCGAC AAACTCGATGGTCAGCACGGCACTTACTACCGGGCCTGGGAAAATCTGACTGGCATACCTGCCACCGCAAGTGCGTGGCC GTCCTGGGATCAAGTCGGCAACAAGCCGCAAACCTTCACACCTAGCGACCACTCGCACGCCAACTACTTGGTCAAGGCCG GCGATGTCATGACTGGGCAACTCACGGCGCCGCGCCTGGGGATCAATATCAGCGGCGGCGCACAGGGTGCGTTTGACGCC CTCGTCTCAAGCGCCGGGCGCGTGCTCATGCGCGACTACGGCAACGGCACGCCAGTGTTGGATTTCGTCAACGCAGCGAA CAACGCTTGGGTCGCCGGTCGCATCCGAACCGGTGGCAACCCGCTCCACCTCGAAACCACACAGGTCGCAGTCTCGGGTG CAGGCTCGTTTGCTGGATCCCTGCATGCAGATAGCCTCGGCTCCGCATCGGGCTATTTCATCAGCAAGAGCAACGTGACC GTCCTCGGTGCCGAGGGCGGCGCGAGCATCTACCTCCGCCCCAATGGCGCTTTTAATTCCACCGCAGAAGCAGTACTGAA CACAGCAGGCAGCCTGCTACTGCGCCCAACAGTGAGCCAGCCCGGCAATGGCATCAACAGCTTTGCGCACCTGAGCTCCG GCAGTTTCGGCGGAGGCTTCGGGCTGATCGATGGCGCCTACAACATCGGCTTCTGGAGCGAGAACGGCTATCTTCGCATC GGCATGGCAACCAACAACGGGGCGTTGCAGCAGCGCATGGGGCTGACCCCGTCTGGCGCGCTGTCGGCGGTTGGCGGCTT TGACTTCGGGTCTTCCCGCAAACTCAAAAACATCATTGGCGCGTTGCCGTATGGCTTGGCCGAGGTGGAACAGGTCACTA CGTTGCTGGGACGCTACAAAAAACAGTACAACCCGGACGGCCGCGTGCGCCTGTTCTTCGATGCAGAGCAGCTATTGGAA ATCATGCCCGAGACGGTAGATGCACGCGGCGTGAGCTTCGAAGGCGAGCTGGTCCCAGCGGTGCACATCGACCAGCTCTT ACCCGTCGCGTTCAACGCCATCAAGCAGCTATCCGCCGCCGTTCGGCGTCTGCAGGCAGACCTCGCTGATCTACGTCCCA CTCACTGA
Upstream 100 bases:
>100_bases CATGCTGCTGCTCGCCCTGGACGCGGTCTTTGCCGACATCGATGTAAAGCAGATCGCCTTCGGTGCAACCAACTTCACTG ACCCGGCCGCCACGACTGAA
Downstream 100 bases:
>100_bases CCAAATAGGCCGACCCATGACTAATTCTCGAATCCGCACACTCGCGCCAGGCGTTGACGTTGAGCGCATCGCGGTGGAAT CGCATTTCTTCTACGACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MAGIVELATEDEAAAGTDKIRVITAWLLKKILDARLGAGAPSAFIRGLLGLTSAALLRTALELKGAALKDEGAGNNLDAD KLDGQHGTYYRAWENLTGIPATASAWPSWDQVGNKPQTFTPSDHSHANYLVKAGDVMTGQLTAPRLGINISGGAQGAFDA LVSSAGRVLMRDYGNGTPVLDFVNAANNAWVAGRIRTGGNPLHLETTQVAVSGAGSFAGSLHADSLGSASGYFISKSNVT VLGAEGGASIYLRPNGAFNSTAEAVLNTAGSLLLRPTVSQPGNGINSFAHLSSGSFGGGFGLIDGAYNIGFWSENGYLRI GMATNNGALQQRMGLTPSGALSAVGGFDFGSSRKLKNIIGALPYGLAEVEQVTTLLGRYKKQYNPDGRVRLFFDAEQLLE IMPETVDARGVSFEGELVPAVHIDQLLPVAFNAIKQLSAAVRRLQADLADLRPTH
Sequences:
>Translated_455_residues MAGIVELATEDEAAAGTDKIRVITAWLLKKILDARLGAGAPSAFIRGLLGLTSAALLRTALELKGAALKDEGAGNNLDAD KLDGQHGTYYRAWENLTGIPATASAWPSWDQVGNKPQTFTPSDHSHANYLVKAGDVMTGQLTAPRLGINISGGAQGAFDA LVSSAGRVLMRDYGNGTPVLDFVNAANNAWVAGRIRTGGNPLHLETTQVAVSGAGSFAGSLHADSLGSASGYFISKSNVT VLGAEGGASIYLRPNGAFNSTAEAVLNTAGSLLLRPTVSQPGNGINSFAHLSSGSFGGGFGLIDGAYNIGFWSENGYLRI GMATNNGALQQRMGLTPSGALSAVGGFDFGSSRKLKNIIGALPYGLAEVEQVTTLLGRYKKQYNPDGRVRLFFDAEQLLE IMPETVDARGVSFEGELVPAVHIDQLLPVAFNAIKQLSAAVRRLQADLADLRPTH >Mature_454_residues AGIVELATEDEAAAGTDKIRVITAWLLKKILDARLGAGAPSAFIRGLLGLTSAALLRTALELKGAALKDEGAGNNLDADK LDGQHGTYYRAWENLTGIPATASAWPSWDQVGNKPQTFTPSDHSHANYLVKAGDVMTGQLTAPRLGINISGGAQGAFDAL VSSAGRVLMRDYGNGTPVLDFVNAANNAWVAGRIRTGGNPLHLETTQVAVSGAGSFAGSLHADSLGSASGYFISKSNVTV LGAEGGASIYLRPNGAFNSTAEAVLNTAGSLLLRPTVSQPGNGINSFAHLSSGSFGGGFGLIDGAYNIGFWSENGYLRIG MATNNGALQQRMGLTPSGALSAVGGFDFGSSRKLKNIIGALPYGLAEVEQVTTLLGRYKKQYNPDGRVRLFFDAEQLLEI MPETVDARGVSFEGELVPAVHIDQLLPVAFNAIKQLSAAVRRLQADLADLRPTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47510; Mature: 47379
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIVELATEDEAAAGTDKIRVITAWLLKKILDARLGAGAPSAFIRGLLGLTSAALLRTA CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LELKGAALKDEGAGNNLDADKLDGQHGTYYRAWENLTGIPATASAWPSWDQVGNKPQTFT HHHCCCCCCCCCCCCCCCHHHCCCCCCCEEEHHHCCCCCCCCCCCCCCHHHHCCCCCCCC PSDHSHANYLVKAGDVMTGQLTAPRLGINISGGAQGAFDALVSSAGRVLMRDYGNGTPVL CCCCCCCCEEEEECCEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCHH DFVNAANNAWVAGRIRTGGNPLHLETTQVAVSGAGSFAGSLHADSLGSASGYFISKSNVT HHHHCCCCCEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCEE VLGAEGGASIYLRPNGAFNSTAEAVLNTAGSLLLRPTVSQPGNGINSFAHLSSGSFGGGF EEECCCCCEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCC GLIDGAYNIGFWSENGYLRIGMATNNGALQQRMGLTPSGALSAVGGFDFGSSRKLKNIIG EEECCCEEEEEECCCCEEEEEEECCCCHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHH ALPYGLAEVEQVTTLLGRYKKQYNPDGRVRLFFDAEQLLEIMPETVDARGVSFEGELVPA HCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHCCHHHCCCCCCCCCCEECH VHIDQLLPVAFNAIKQLSAAVRRLQADLADLRPTH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AGIVELATEDEAAAGTDKIRVITAWLLKKILDARLGAGAPSAFIRGLLGLTSAALLRTA CCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LELKGAALKDEGAGNNLDADKLDGQHGTYYRAWENLTGIPATASAWPSWDQVGNKPQTFT HHHCCCCCCCCCCCCCCCHHHCCCCCCCEEEHHHCCCCCCCCCCCCCCHHHHCCCCCCCC PSDHSHANYLVKAGDVMTGQLTAPRLGINISGGAQGAFDALVSSAGRVLMRDYGNGTPVL CCCCCCCCEEEEECCEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCHH DFVNAANNAWVAGRIRTGGNPLHLETTQVAVSGAGSFAGSLHADSLGSASGYFISKSNVT HHHHCCCCCEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCEE VLGAEGGASIYLRPNGAFNSTAEAVLNTAGSLLLRPTVSQPGNGINSFAHLSSGSFGGGF EEECCCCCEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCC GLIDGAYNIGFWSENGYLRIGMATNNGALQQRMGLTPSGALSAVGGFDFGSSRKLKNIIG EEECCCEEEEEECCCCEEEEEEECCCCHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHH ALPYGLAEVEQVTTLLGRYKKQYNPDGRVRLFFDAEQLLEIMPETVDARGVSFEGELVPA HCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHCCHHHCCCCCCCCCCEECH VHIDQLLPVAFNAIKQLSAAVRRLQADLADLRPTH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA