| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is I
Identifier: 21243385
GI number: 21243385
Start: 3115861
End: 3116403
Strand: Direct
Name: I
Synonym: XAC2656
Alternate gene names: NA
Gene position: 3115861-3116403 (Clockwise)
Preceding gene: 21243384
Following gene: 21243386
Centisome position: 60.2
GC content: 65.75
Gene sequence:
>543_bases ATGAGTAACCCTCTGCCGCCCAACGCCACGCCGATAGAGCGCGCCCTGGCGGCCGTCACCGCTCGCCTGGAAGCGATCCC GCTGCCATACCCGGATCTGTGGAATCCAGACACGTGCCCGGCCGGCCATCTGCCGTGGCTGGCCTGGACGCTGTCGGTGG ACGACTGGAAGGCCGACTGGAGCGATGCAGTCAAGCGCTCGCGCCTGCGTAGCGCCATGGCCATCCAGCGCCGCAAGGGC ACGGCCAACAGCGTGCGCATGGTGGTCGAGTCGTTCGGCGGCGCGGTGGCTATCCGCGAATGGTGGCAGACCGAGCCGCG CGGTCAGCCGCATACCTTCGAGCTCACGCTCACGCTGACCGGCACCGATGGTCAAACCGCCACATCTCGCTTCGTCAATG AAGTCATTGCCGAAGTCGAGCGCACCAAGCCTGTCCGTTCCCACTTCACTTTCACCCAGGGATTCCAGGCAGAAGCCCGC ATCGGCGTACTCGCCGTTGCGCGGCCAGCCGTCTATCGACGGTTGCTGATGGAAGCCCAGTAA
Upstream 100 bases:
>100_bases GTGCAGCGCGTCGAGCTGGACTCGCCTGCAGCCGACATCCGGATCAGCCGCACGCAGGCCGCCTACTGCACCGCGATCGA CATCGTGCACGCCGGCATCG
Downstream 100 bases:
>100_bases CTGGACACCGAAATGCCCGGTCTCAAGCTCCAAGTCACCACCGCTGGCCGTGCCGCGCTGGTCAATGCACCCAACACCGG GACCAATCCGGTGCTGATCA
Product: phage-related tail protein
Products: NA
Alternate protein names: Tail Protein I; Phage Tail Protein; Phage-Related Tail Protein; Bacteriophage P2-Related Tail Formation Protein; Bacteriophage Protein; Tail Protein I Prophage; Phage P2 Baseplate Assembly GpI-Like Protein; Prophage Tail Protein; Phage-Related Tail Protein I; Bacteriophage Tail Protein I; Tail Formation-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPI; Bacteriophage P2-Related Tail Formation Protein GpI; Bacteriophage Tail Formation Protein I; Pyocin R2_PP Tail Formation Protein GpI
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSNPLPPNATPIERALAAVTARLEAIPLPYPDLWNPDTCPAGHLPWLAWTLSVDDWKADWSDAVKRSRLRSAMAIQRRKG TANSVRMVVESFGGAVAIREWWQTEPRGQPHTFELTLTLTGTDGQTATSRFVNEVIAEVERTKPVRSHFTFTQGFQAEAR IGVLAVARPAVYRRLLMEAQ
Sequences:
>Translated_180_residues MSNPLPPNATPIERALAAVTARLEAIPLPYPDLWNPDTCPAGHLPWLAWTLSVDDWKADWSDAVKRSRLRSAMAIQRRKG TANSVRMVVESFGGAVAIREWWQTEPRGQPHTFELTLTLTGTDGQTATSRFVNEVIAEVERTKPVRSHFTFTQGFQAEAR IGVLAVARPAVYRRLLMEAQ >Mature_179_residues SNPLPPNATPIERALAAVTARLEAIPLPYPDLWNPDTCPAGHLPWLAWTLSVDDWKADWSDAVKRSRLRSAMAIQRRKGT ANSVRMVVESFGGAVAIREWWQTEPRGQPHTFELTLTLTGTDGQTATSRFVNEVIAEVERTKPVRSHFTFTQGFQAEARI GVLAVARPAVYRRLLMEAQ
Specific function: Unknown
COG id: COG4385
COG function: function code R; Bacteriophage P2-related tail formation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20105; Mature: 19974
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPLPPNATPIERALAAVTARLEAIPLPYPDLWNPDTCPAGHLPWLAWTLSVDDWKADW CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCH SDAVKRSRLRSAMAIQRRKGTANSVRMVVESFGGAVAIREWWQTEPRGQPHTFELTLTLT HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEHHHHHCCCCCCCCEEEEEEEEEE GTDGQTATSRFVNEVIAEVERTKPVRSHFTFTQGFQAEARIGVLAVARPAVYRRLLMEAQ CCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SNPLPPNATPIERALAAVTARLEAIPLPYPDLWNPDTCPAGHLPWLAWTLSVDDWKADW CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCH SDAVKRSRLRSAMAIQRRKGTANSVRMVVESFGGAVAIREWWQTEPRGQPHTFELTLTLT HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEHHHHHCCCCCCCCEEEEEEEEEE GTDGQTATSRFVNEVIAEVERTKPVRSHFTFTQGFQAEARIGVLAVARPAVYRRLLMEAQ CCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA