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The map label for this gene is virB9 [H]

Identifier: 21243351

GI number: 21243351

Start: 3085566

End: 3086333

Strand: Reverse

Name: virB9 [H]

Synonym: XAC2620

Alternate gene names: 21243351

Gene position: 3086333-3085566 (Counterclockwise)

Preceding gene: 21243352

Following gene: 21243350

Centisome position: 59.63

GC content: 48.96

Gene sequence:

>768_bases
ATGAAACTTTTTAACCGATATAGGGTTGCGTTGTTGTCAGCGCTACCACTTGCGCTGTGTGCCTTGTCAGCAGCTGCTCA
GGTGGTACAGGAATATGAGTATGCACCCGATCGTATCTATCAGGTGCGCACAGGCCTTGGCATTACCACTCAGGTGGAGC
TGAGCCCGAACGAAAAAATTCTGGATTACAGCACCGGTTTCACTGGTGGATGGGAGCTCACGCGGCGAGAGAATGTTTTT
TATCTCAAGCCTAAAAACGTCGACGTCGATACGAACATGATGATTCGTACCGCGACGCATTCTTATATTCTTGAGCTCAA
GGTGGTGGCAACAGATTGGCAACGTCTCGAGCAGGCGAAGCAAGCGGGTGTCCAATATAAGGTTGTGTTTACCTACCCGA
AGGACACAAGCTTCAATAATGTCGCGGATGCGGATACTTCGAAGAACGGCCCGCTACTGAATGCCAAGATCTTGAAGGAT
CGTCGTTACTATTACGATTACGATTATGCGACACGGACCAAGAAGTCCTGGTTGATTCCAAGCCGTGTCTATGATGACGG
TAAATTCACTTATATCAATATGGATCTGACGCGTTTTCCGACTGGAAATTTTCCTGCGGTCTTCGCTCGCGAGAAAGAGC
ACGCCGAAGATTTTCTCGTTAATACGACGGTGGAGGGAAATACTCTGATCGTGCACGGAACCTACCCTTTCCTGGTGGTT
CGTCATGGCGATAACGTCGTCGGTCTGCGAAGGAACAAGCAAAAGTGA

Upstream 100 bases:

>100_bases
CAGCATTTCCTGATCAAATGCAGCCGGCCGGTCAGCTGCAAGCGCAGCCTGCAATGCAACCCCAAGGGATGCCCAAGAAT
GTCAATGGAGCAAGTGGTCG

Downstream 100 bases:

>100_bases
ATTCGAATATTCCAAACAGCCCTGATGAGCGCATCCAGAACCATGGCGGCGATGAGCAGCACAACGGCGACCACAACGAG
CGCAACAATCCTTACTTCGC

Product: VirB9 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MKLFNRYRVALLSALPLALCALSAAAQVVQEYEYAPDRIYQVRTGLGITTQVELSPNEKILDYSTGFTGGWELTRRENVF
YLKPKNVDVDTNMMIRTATHSYILELKVVATDWQRLEQAKQAGVQYKVVFTYPKDTSFNNVADADTSKNGPLLNAKILKD
RRYYYDYDYATRTKKSWLIPSRVYDDGKFTYINMDLTRFPTGNFPAVFAREKEHAEDFLVNTTVEGNTLIVHGTYPFLVV
RHGDNVVGLRRNKQK

Sequences:

>Translated_255_residues
MKLFNRYRVALLSALPLALCALSAAAQVVQEYEYAPDRIYQVRTGLGITTQVELSPNEKILDYSTGFTGGWELTRRENVF
YLKPKNVDVDTNMMIRTATHSYILELKVVATDWQRLEQAKQAGVQYKVVFTYPKDTSFNNVADADTSKNGPLLNAKILKD
RRYYYDYDYATRTKKSWLIPSRVYDDGKFTYINMDLTRFPTGNFPAVFAREKEHAEDFLVNTTVEGNTLIVHGTYPFLVV
RHGDNVVGLRRNKQK
>Mature_255_residues
MKLFNRYRVALLSALPLALCALSAAAQVVQEYEYAPDRIYQVRTGLGITTQVELSPNEKILDYSTGFTGGWELTRRENVF
YLKPKNVDVDTNMMIRTATHSYILELKVVATDWQRLEQAKQAGVQYKVVFTYPKDTSFNNVADADTSKNGPLLNAKILKD
RRYYYDYDYATRTKKSWLIPSRVYDDGKFTYINMDLTRFPTGNFPAVFAREKEHAEDFLVNTTVEGNTLIVHGTYPFLVV
RHGDNVVGLRRNKQK

Specific function: Unknown

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbG/virB9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010258
- InterPro:   IPR014148 [H]

Pfam domain/function: PF03524 CagX [H]

EC number: NA

Molecular weight: Translated: 29322; Mature: 29322

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFNRYRVALLSALPLALCALSAAAQVVQEYEYAPDRIYQVRTGLGITTQVELSPNEKI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCEE
LDYSTGFTGGWELTRRENVFYLKPKNVDVDTNMMIRTATHSYILELKVVATDWQRLEQAK
EEECCCCCCCEEEEECCCEEEECCCCCCCCCCEEEEEECCEEEEEEEEEEHHHHHHHHHH
QAGVQYKVVFTYPKDTSFNNVADADTSKNGPLLNAKILKDRRYYYDYDYATRTKKSWLIP
HCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECHHCCCCCCEECC
SRVYDDGKFTYINMDLTRFPTGNFPAVFAREKEHAEDFLVNTTVEGNTLIVHGTYPFLVV
HHEECCCCEEEEEEEEEECCCCCCCEEEECCHHCCCCEEEEEEECCCEEEEECCCEEEEE
RHGDNVVGLRRNKQK
ECCCCEEEECCCCCC
>Mature Secondary Structure
MKLFNRYRVALLSALPLALCALSAAAQVVQEYEYAPDRIYQVRTGLGITTQVELSPNEKI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCEE
LDYSTGFTGGWELTRRENVFYLKPKNVDVDTNMMIRTATHSYILELKVVATDWQRLEQAK
EEECCCCCCCEEEEECCCEEEECCCCCCCCCCEEEEEECCEEEEEEEEEEHHHHHHHHHH
QAGVQYKVVFTYPKDTSFNNVADADTSKNGPLLNAKILKDRRYYYDYDYATRTKKSWLIP
HCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECHHCCCCCCEECC
SRVYDDGKFTYINMDLTRFPTGNFPAVFAREKEHAEDFLVNTTVEGNTLIVHGTYPFLVV
HHEECCCCEEEEEEEEEECCCCCCCEEEECCHHCCCCEEEEEEECCCEEEEECCCEEEEE
RHGDNVVGLRRNKQK
ECCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12910271; 3584073 [H]