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The map label for this gene is 21243339

Identifier: 21243339

GI number: 21243339

Start: 3073753

End: 3074253

Strand: Reverse

Name: 21243339

Synonym: XAC2608

Alternate gene names: NA

Gene position: 3074253-3073753 (Counterclockwise)

Preceding gene: 21243340

Following gene: 21243338

Centisome position: 59.4

GC content: 60.68

Gene sequence:

>501_bases
GTGTCATTGATGGTGCTGACGCTTTGGATTTTTCTCCAGGGCTACAGCATCGTGACCGGCCAGTCGCGCGAGGCGGCCAT
GGGCCTGGTGGTGACGGCGCTGCGCGCGGCGCTGATCATCGGGGTGGCGACCAGCATGGCACAAGGCTCGGCCCGCTTGT
ACTGGACGCTGACCGATGGAGTCAGCCAGGCGATCACCAAGACAGTGACGGGCAGCTCAAAGAGCCCGTATGAAGCGATC
GACAAGAACTTGATGTTGATGCAAGTGGCCATGTCGGCTCTGGATCAGATCAAGACCGGGCTCGGTGGTTCACCGGCCTG
GGCATGGCCGGTCCGGGCGTCGTTGCAGGCTCGATGCTGCTTCTCAACAAGCTGGCCATGGCGCTGGTGGTGGGCTTCGG
GCCTCTGTTCATCCTGTGTCTGCTGTTCCAAGCGACGAAGTCGTTGTTCAGCAAATGGCTGCTATACGGACTGGGCACTG
TGTTTTCGCTGTCGGTGTTGA

Upstream 100 bases:

>100_bases
TCAGGAAGTCCGCCTTGGCTCTACTTGCAACGACCTGCGCGATGAGATTGCGATCTTGCAGTGGGAGTTGTTACAACGCA
CCACGGCCTGGGTAGGTATG

Downstream 100 bases:

>100_bases
CCTTCACAGTGAGCTTGGCGACAAAGGTGGTCGGCGCAGTGGGTGCTGCCTTCGTCGCAAAGTGGGCGATGAACGGATTT
ACGGGCGAAGGCATCAGCAG

Product: VirB6 protein

Products: NA

Alternate protein names: VirB6 Protein; VirB6-Like Membrane Protein; TrbL/VirB6 Plasmid Conjugal Transfer Protein; Type IV Secretion System Transmembrane Protein

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSLMVLTLWIFLQGYSIVTGQSREAAMGLVVTALRAALIIGVATSMAQGSARLYWTLTDGVSQAITKTVTGSSKSPYEAI
DKNLMLMQVAMSALDQIKTGLGGSPAWAWPVRASLQARCCFSTSWPWRWWWASGLCSSCVCCSKRRSRCSANGCYTDWAL
CFRCRC

Sequences:

>Translated_166_residues
MSLMVLTLWIFLQGYSIVTGQSREAAMGLVVTALRAALIIGVATSMAQGSARLYWTLTDGVSQAITKTVTGSSKSPYEAI
DKNLMLMQVAMSALDQIKTGLGGSPAWAWPVRASLQARCCFSTSWPWRWWWASGLCSSCVCCSKRRSRCSANGCYTDWAL
CFRCRC
>Mature_165_residues
SLMVLTLWIFLQGYSIVTGQSREAAMGLVVTALRAALIIGVATSMAQGSARLYWTLTDGVSQAITKTVTGSSKSPYEAID
KNLMLMQVAMSALDQIKTGLGGSPAWAWPVRASLQARCCFSTSWPWRWWWASGLCSSCVCCSKRRSRCSANGCYTDWALC
FRCRC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18202; Mature: 18071

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
10.8 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
10.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLMVLTLWIFLQGYSIVTGQSREAAMGLVVTALRAALIIGVATSMAQGSARLYWTLTDG
CHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHH
VSQAITKTVTGSSKSPYEAIDKNLMLMQVAMSALDQIKTGLGGSPAWAWPVRASLQARCC
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE
FSTSWPWRWWWASGLCSSCVCCSKRRSRCSANGCYTDWALCFRCRC
ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
SLMVLTLWIFLQGYSIVTGQSREAAMGLVVTALRAALIIGVATSMAQGSARLYWTLTDG
HHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHH
VSQAITKTVTGSSKSPYEAIDKNLMLMQVAMSALDQIKTGLGGSPAWAWPVRASLQARCC
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE
FSTSWPWRWWWASGLCSSCVCCSKRRSRCSANGCYTDWALCFRCRC
ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA