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The map label for this gene is virB6

Identifier: 21243338

GI number: 21243338

Start: 3073334

End: 3073930

Strand: Reverse

Name: virB6

Synonym: XAC2607

Alternate gene names: NA

Gene position: 3073930-3073334 (Counterclockwise)

Preceding gene: 21243339

Following gene: 21243337

Centisome position: 59.39

GC content: 57.96

Gene sequence:

>597_bases
ATGGCCGGTCCGGGCGTCGTTGCAGGCTCGATGCTGCTTCTCAACAAGCTGGCCATGGCGCTGGTGGTGGGCTTCGGGCC
TCTGTTCATCCTGTGTCTGCTGTTCCAAGCGACGAAGTCGTTGTTCAGCAAATGGCTGCTATACGGACTGGGCACTGTGT
TTTCGCTGTCGGTGTTGACCTTCACAGTGAGCTTGGCGACAAAGGTGGTCGGCGCAGTGGGTGCTGCCTTCGTCGCAAAG
TGGGCGATGAACGGATTTACGGGCGAAGGCATCAGCAGCATGGCGCTGCAGCAGGGAGGATTAGGACTGGTGTTAACGAC
ATTGATCATCACCGCCCCGCCGATGGCCGCTGCCTTCTTCCAGGGTACGCTGGGCCAGTTCACGGCGTATTCTGCCCTGG
GGCAGCTGGATCGAGGCGGTCAGTCAGCTCCGGCGGCTGGGCGGCCTTATGAGCCGGGGGCGCCGGCTCCTGACACTAAT
AAAGGGAGGGATCAATTCAATCCGTCTGGACAGGGATCTAGGCAATCTCAATATGCAAATAACGATACCGACACTGCTCC
TAGCGGAAGATTTGGTAAAGCTAATTCAACTTCCTGA

Upstream 100 bases:

>100_bases
GCCCGTATGAAGCGATCGACAAGAACTTGATGTTGATGCAAGTGGCCATGTCGGCTCTGGATCAGATCAAGACCGGGCTC
GGTGGTTCACCGGCCTGGGC

Downstream 100 bases:

>100_bases
TCAGTTAGTCCATAAAGTTTCAGGTAGCTCATAAAGACTAGAATCGGGGTTTTATGAAATTATTTATTTTACTAATTTTT
CTGTTTAGTTCCTCAGCTGC

Product: VirB6 protein

Products: NA

Alternate protein names: Type IV Secretion System; VirB6-Like Membrane Protein; TrbL/VirB6 Plasmid Conjugal Transfer Protein; Type IV Secretion System Transmembrane Protein

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MAGPGVVAGSMLLLNKLAMALVVGFGPLFILCLLFQATKSLFSKWLLYGLGTVFSLSVLTFTVSLATKVVGAVGAAFVAK
WAMNGFTGEGISSMALQQGGLGLVLTTLIITAPPMAAAFFQGTLGQFTAYSALGQLDRGGQSAPAAGRPYEPGAPAPDTN
KGRDQFNPSGQGSRQSQYANNDTDTAPSGRFGKANSTS

Sequences:

>Translated_198_residues
MAGPGVVAGSMLLLNKLAMALVVGFGPLFILCLLFQATKSLFSKWLLYGLGTVFSLSVLTFTVSLATKVVGAVGAAFVAK
WAMNGFTGEGISSMALQQGGLGLVLTTLIITAPPMAAAFFQGTLGQFTAYSALGQLDRGGQSAPAAGRPYEPGAPAPDTN
KGRDQFNPSGQGSRQSQYANNDTDTAPSGRFGKANSTS
>Mature_197_residues
AGPGVVAGSMLLLNKLAMALVVGFGPLFILCLLFQATKSLFSKWLLYGLGTVFSLSVLTFTVSLATKVVGAVGAAFVAKW
AMNGFTGEGISSMALQQGGLGLVLTTLIITAPPMAAAFFQGTLGQFTAYSALGQLDRGGQSAPAAGRPYEPGAPAPDTNK
GRDQFNPSGQGSRQSQYANNDTDTAPSGRFGKANSTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20292; Mature: 20160

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPGVVAGSMLLLNKLAMALVVGFGPLFILCLLFQATKSLFSKWLLYGLGTVFSLSVLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTVSLATKVVGAVGAAFVAKWAMNGFTGEGISSMALQQGGLGLVLTTLIITAPPMAAAFF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHHH
QGTLGQFTAYSALGQLDRGGQSAPAAGRPYEPGAPAPDTNKGRDQFNPSGQGSRQSQYAN
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
NDTDTAPSGRFGKANSTS
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGPGVVAGSMLLLNKLAMALVVGFGPLFILCLLFQATKSLFSKWLLYGLGTVFSLSVLT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTVSLATKVVGAVGAAFVAKWAMNGFTGEGISSMALQQGGLGLVLTTLIITAPPMAAAFF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHHH
QGTLGQFTAYSALGQLDRGGQSAPAAGRPYEPGAPAPDTNKGRDQFNPSGQGSRQSQYAN
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
NDTDTAPSGRFGKANSTS
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA