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The map label for this gene is blc [H]

Identifier: 21243293

GI number: 21243293

Start: 3019294

End: 3019830

Strand: Direct

Name: blc [H]

Synonym: XAC2561

Alternate gene names: 21243293

Gene position: 3019294-3019830 (Clockwise)

Preceding gene: 21243291

Following gene: 21243294

Centisome position: 58.34

GC content: 68.16

Gene sequence:

>537_bases
ATGCGCCTGCCCCGCCTGCTGTTGTCGTTCGTCGCCCTGCTGCCGCTGACAGCGCTGGCGCAACAGCCGGTGCGTGCGGT
GCCGCAGCTGGACATCTCGCGCTACGCGGGCCAGTGGCACGAGATTGCGCACCTGCCGGTGTCGTTCCAGAAAAAGTGCC
GCGGCGACATCACCGCCAGCTACACCTTGCGCGACGATGGCCTGGTCGGCGTGCGCAATGGCTGCCGCACCGCCGATGGC
AGCCTGACCCAGGCCGACGGCGTGGCGCGCCCGGTCGATGGCCAGCCCGGGCAGTTGCAGGTGCGCTTCGCTCCCGAGTG
GCTCGCTTGGTTGCCGCTGGTGTGGGCCGACTATTGGGTGATCGCGCTCGACCCGGATTACCAGTGGGCGATGGTCGGCG
AGCCGGATCGCAAATACCTGTGGATCCTGTCGCGCTCGCCGCAGATGCAGCGCGCGCAATTGGAACGGCTCAAGGCGAAG
GCGGCCGAGATGGGCTACGACCTGTCGCCGTTGATTGTCGCCGCGCCGTTGTTGTGA

Upstream 100 bases:

>100_bases
CTTTGTTGCCGGCCGCTCTCGGCGCCGGCGTTTCTTGCGCCGGTTCACGCCGCGCGGCCGGGTGCATGGCCTAGCCTGCG
CGCGTCCACCGGAGATTGTC

Downstream 100 bases:

>100_bases
GGCCTGCCCGCGCCCCGGCCTAGATCCGGCGCCACCGCTTCGCGCTCAGGAGCGGCGACCGTACTGCGTAGTATTCTTGG
CGCCGCCTCATTCCCGCCAA

Product: outer membrane lipoprotein Blc

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MRLPRLLLSFVALLPLTALAQQPVRAVPQLDISRYAGQWHEIAHLPVSFQKKCRGDITASYTLRDDGLVGVRNGCRTADG
SLTQADGVARPVDGQPGQLQVRFAPEWLAWLPLVWADYWVIALDPDYQWAMVGEPDRKYLWILSRSPQMQRAQLERLKAK
AAEMGYDLSPLIVAAPLL

Sequences:

>Translated_178_residues
MRLPRLLLSFVALLPLTALAQQPVRAVPQLDISRYAGQWHEIAHLPVSFQKKCRGDITASYTLRDDGLVGVRNGCRTADG
SLTQADGVARPVDGQPGQLQVRFAPEWLAWLPLVWADYWVIALDPDYQWAMVGEPDRKYLWILSRSPQMQRAQLERLKAK
AAEMGYDLSPLIVAAPLL
>Mature_178_residues
MRLPRLLLSFVALLPLTALAQQPVRAVPQLDISRYAGQWHEIAHLPVSFQKKCRGDITASYTLRDDGLVGVRNGCRTADG
SLTQADGVARPVDGQPGQLQVRFAPEWLAWLPLVWADYWVIALDPDYQWAMVGEPDRKYLWILSRSPQMQRAQLERLKAK
AAEMGYDLSPLIVAAPLL

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Homo sapiens, GI4502163, Length=155, Percent_Identity=29.0322580645161, Blast_Score=73, Evalue=1e-13,
Organism=Escherichia coli, GI1790592, Length=174, Percent_Identity=33.9080459770115, Blast_Score=87, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 19973; Mature: 19973

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS00142 ZINC_PROTEASE ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPRLLLSFVALLPLTALAQQPVRAVPQLDISRYAGQWHEIAHLPVSFQKKCRGDITAS
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHCCCCHHHHHCCCCCEEE
YTLRDDGLVGVRNGCRTADGSLTQADGVARPVDGQPGQLQVRFAPEWLAWLPLVWADYWV
EEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCEEE
IALDPDYQWAMVGEPDRKYLWILSRSPQMQRAQLERLKAKAAEMGYDLSPLIVAAPLL
EEECCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC
>Mature Secondary Structure
MRLPRLLLSFVALLPLTALAQQPVRAVPQLDISRYAGQWHEIAHLPVSFQKKCRGDITAS
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHCCCCHHHHHCCCCCEEE
YTLRDDGLVGVRNGCRTADGSLTQADGVARPVDGQPGQLQVRFAPEWLAWLPLVWADYWV
EEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCEEE
IALDPDYQWAMVGEPDRKYLWILSRSPQMQRAQLERLKAKAAEMGYDLSPLIVAAPLL
EEECCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]