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The map label for this gene is ftsY [H]

Identifier: 21243285

GI number: 21243285

Start: 3010436

End: 3012100

Strand: Direct

Name: ftsY [H]

Synonym: XAC2552

Alternate gene names: 21243285

Gene position: 3010436-3012100 (Clockwise)

Preceding gene: 21243284

Following gene: 21243286

Centisome position: 58.17

GC content: 69.49

Gene sequence:

>1665_bases
ATGATAGAATTTCGGGTTTCCCCTACTGCGTTGCCAATGGCCAGCTTTTTTCGCCGTAACAAGCCAACCACGCCCGACAG
CTCGCGTACCTCGCGCTACAGCCTGGAAGAACTGGCAGCCGCATTCCCCACCGCGCCGTCTGCCGCCACCCCGGCATCGC
CGGTCGAGGCGGTGCCGAATGCCGAGCCAGAACGCGAAGCGGCCGCAACGCCGGTTGTTGCGCCTGTCACGCCTGCTCCG
GCAGGCGGCGAGCCTGCAGCGCCCGCGGCGCCGATACCGCCGCAGATCACCGCCGCGCCAGCCGACCAGCTGGCGCAGGA
GATCGCTGCACGCACTGGCCAGGCGCAGAGTATTGCCGCCGTCCCGAGCGCGCCCGCAGCTCCTGCGGCGCCTGCGCCGA
CCGCATTGCAGGCACTGCCAGACCCGATACCCGCCAGCGCCCCCAGCGCGCCGGTCGTGGTGCCGCCGCCGGTCGTAGCG
CAGCCGCAGACCGTCCCGACGCCGCCTCCTGCCGTGCCTGCACAGCCGGTGTCGCCCCTGCAAAGCGCAGCGCCTGCCGT
GGTCGCACCCCCGGTCGCCGCTCCGCCGGCCTCGACGCCTGCACCGGCTGCTGCAGCTCCAGCCGGCGCGCCGCCCATCA
GTGCCGCGCCGACGGTCACCGCGCCGGCGATTGTCAGTGCACCGCTGCCGAGCACGCAGGACGACAGCATCGTCGGCCAG
CGCGAGGCCCTCCCCGCCGCGCCGGCGGGAAAACCCGGCTGGCGCGAGCGGTTGCGCAACAGCACCTTCGCTCGCAGTTT
CGGCGGCCTGTTCTCGCGCAATCCCAAGCTCGATGACGACCTGCTCGACGAGATCGAAACCGCGTTGATCACCGCCGACG
TCGGCATCGGCGCCACCACGGCGTTGATCGACGGCCTGCGCAAGCGGATGAAGTCGCGCGAATTCGTCGACGCCCAGGCG
ATGTTCAAGGCCTTGCGTGCCGATCTCATCGCGCTGCTGCAGCCGGTCTCCAAACCGCTGGTGATCGACCGCTCGCTCAA
ACCGTTCGTGGTGCTCACCGTTGGCGTCAACGGCGTCGGCAAGACCACCACCATCGGCAAGCTCGCCAAGCGCTTCAAGG
ACGAAGGCAACAGCCTGATGCTCGCAGCCGGCGACACCTTCCGTGCTGCCGCCGTGGCGCAATTGCAGGCCTGGGGCGAT
CGCAATGGCGTGGCCGTGATCGCGCAGGGGCAAAACGCCGATGCCGCGTCGGTGGCGTTCGACGCGCTGCAGGCCGCCAA
GGCGCGCGGCACCGATGTGTTGATCGCCGACACCGCCGGCCGCCTGCATACCCAGACCGGGCTGATGAACGAGCTCGGCA
AGATCCGCCGCGTGCTCGGCAAGATCGATGCCGCTGCGCCGCACGAAGTCTTGATGGTCATCGACGGCACCACCGGCCAG
AACGCCATTTCGCAGCTGCGCCAGTTCCACGCTGCCGTGGGCGTCACCGGCCTGGTCGTGACCAAGCTCGATGGCACTGC
CAAGGGCGGCGTGGTGTTCGCGCTGGCGCGCGAGTTCAATATTCCGATCCGCTTTGCCGGTATCGGCGAGCGCCCGGAGG
ATCTGCGCGTCTTCGACCCGGTTGCCTTCGTCGACGCGCTGTTGCCGGACGCGTTGGGCGGTTGA

Upstream 100 bases:

>100_bases
GCACCCAGGTGAGCCGCCATACCGACGGCAGTGCGATGCATGCGAGACGCCCGGGCGCGGAGCTGCGCTAAAGGCGGCGT
CAAGGTGTCAGGAGGCCCGG

Downstream 100 bases:

>100_bases
TCGGAAGATGCCTGTCCGCATCTGCAACCGCTGTGCGCGCAGGCGCGACAGGCAGGTTGCACCGTGCGGCAGGCGTCACG
CGATTGGTCCCAGGCAAGAC

Product: cell division protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MIEFRVSPTALPMASFFRRNKPTTPDSSRTSRYSLEELAAAFPTAPSAATPASPVEAVPNAEPEREAAATPVVAPVTPAP
AGGEPAAPAAPIPPQITAAPADQLAQEIAARTGQAQSIAAVPSAPAAPAAPAPTALQALPDPIPASAPSAPVVVPPPVVA
QPQTVPTPPPAVPAQPVSPLQSAAPAVVAPPVAAPPASTPAPAAAAPAGAPPISAAPTVTAPAIVSAPLPSTQDDSIVGQ
REALPAAPAGKPGWRERLRNSTFARSFGGLFSRNPKLDDDLLDEIETALITADVGIGATTALIDGLRKRMKSREFVDAQA
MFKALRADLIALLQPVSKPLVIDRSLKPFVVLTVGVNGVGKTTTIGKLAKRFKDEGNSLMLAAGDTFRAAAVAQLQAWGD
RNGVAVIAQGQNADAASVAFDALQAAKARGTDVLIADTAGRLHTQTGLMNELGKIRRVLGKIDAAAPHEVLMVIDGTTGQ
NAISQLRQFHAAVGVTGLVVTKLDGTAKGGVVFALAREFNIPIRFAGIGERPEDLRVFDPVAFVDALLPDALGG

Sequences:

>Translated_554_residues
MIEFRVSPTALPMASFFRRNKPTTPDSSRTSRYSLEELAAAFPTAPSAATPASPVEAVPNAEPEREAAATPVVAPVTPAP
AGGEPAAPAAPIPPQITAAPADQLAQEIAARTGQAQSIAAVPSAPAAPAAPAPTALQALPDPIPASAPSAPVVVPPPVVA
QPQTVPTPPPAVPAQPVSPLQSAAPAVVAPPVAAPPASTPAPAAAAPAGAPPISAAPTVTAPAIVSAPLPSTQDDSIVGQ
REALPAAPAGKPGWRERLRNSTFARSFGGLFSRNPKLDDDLLDEIETALITADVGIGATTALIDGLRKRMKSREFVDAQA
MFKALRADLIALLQPVSKPLVIDRSLKPFVVLTVGVNGVGKTTTIGKLAKRFKDEGNSLMLAAGDTFRAAAVAQLQAWGD
RNGVAVIAQGQNADAASVAFDALQAAKARGTDVLIADTAGRLHTQTGLMNELGKIRRVLGKIDAAAPHEVLMVIDGTTGQ
NAISQLRQFHAAVGVTGLVVTKLDGTAKGGVVFALAREFNIPIRFAGIGERPEDLRVFDPVAFVDALLPDALGG
>Mature_554_residues
MIEFRVSPTALPMASFFRRNKPTTPDSSRTSRYSLEELAAAFPTAPSAATPASPVEAVPNAEPEREAAATPVVAPVTPAP
AGGEPAAPAAPIPPQITAAPADQLAQEIAARTGQAQSIAAVPSAPAAPAAPAPTALQALPDPIPASAPSAPVVVPPPVVA
QPQTVPTPPPAVPAQPVSPLQSAAPAVVAPPVAAPPASTPAPAAAAPAGAPPISAAPTVTAPAIVSAPLPSTQDDSIVGQ
REALPAAPAGKPGWRERLRNSTFARSFGGLFSRNPKLDDDLLDEIETALITADVGIGATTALIDGLRKRMKSREFVDAQA
MFKALRADLIALLQPVSKPLVIDRSLKPFVVLTVGVNGVGKTTTIGKLAKRFKDEGNSLMLAAGDTFRAAAVAQLQAWGD
RNGVAVIAQGQNADAASVAFDALQAAKARGTDVLIADTAGRLHTQTGLMNELGKIRRVLGKIDAAAPHEVLMVIDGTTGQ
NAISQLRQFHAAVGVTGLVVTKLDGTAKGGVVFALAREFNIPIRFAGIGERPEDLRVFDPVAFVDALLPDALGG

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane. Binds to the ribosome in the presence of the SRP particle and a non-hydrolyzable GTP analog. This abolishes trigger f

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI295424842, Length=355, Percent_Identity=29.2957746478873, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI23308697, Length=355, Percent_Identity=29.2957746478873, Blast_Score=116, Evalue=6e-26,
Organism=Homo sapiens, GI4507215, Length=285, Percent_Identity=30.5263157894737, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI226371618, Length=202, Percent_Identity=31.6831683168317, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=30.3703703703704, Blast_Score=70, Evalue=6e-12,
Organism=Escherichia coli, GI1789874, Length=304, Percent_Identity=54.2763157894737, Blast_Score=318, Evalue=5e-88,
Organism=Escherichia coli, GI1788963, Length=266, Percent_Identity=33.0827067669173, Blast_Score=127, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17539958, Length=274, Percent_Identity=30.2919708029197, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI193206261, Length=255, Percent_Identity=32.9411764705882, Blast_Score=109, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=284, Percent_Identity=30.2816901408451, Blast_Score=124, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6320498, Length=231, Percent_Identity=27.2727272727273, Blast_Score=77, Evalue=6e-15,
Organism=Drosophila melanogaster, GI17647949, Length=274, Percent_Identity=31.3868613138686, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24641198, Length=305, Percent_Identity=28.8524590163934, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 56420; Mature: 56420

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFRVSPTALPMASFFRRNKPTTPDSSRTSRYSLEELAAAFPTAPSAATPASPVEAVPN
CEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCC
AEPEREAAATPVVAPVTPAPAGGEPAAPAAPIPPQITAAPADQLAQEIAARTGQAQSIAA
CCCHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEE
VPSAPAAPAAPAPTALQALPDPIPASAPSAPVVVPPPVVAQPQTVPTPPPAVPAQPVSPL
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHH
QSAAPAVVAPPVAAPPASTPAPAAAAPAGAPPISAAPTVTAPAIVSAPLPSTQDDSIVGQ
HHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCH
REALPAAPAGKPGWRERLRNSTFARSFGGLFSRNPKLDDDLLDEIETALITADVGIGATT
HHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEECCCCCHHH
ALIDGLRKRMKSREFVDAQAMFKALRADLIALLQPVSKPLVIDRSLKPFVVLTVGVNGVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCC
KTTTIGKLAKRFKDEGNSLMLAAGDTFRAAAVAQLQAWGDRNGVAVIAQGQNADAASVAF
CHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH
DALQAAKARGTDVLIADTAGRLHTQTGLMNELGKIRRVLGKIDAAAPHEVLMVIDGTTGQ
HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCH
NAISQLRQFHAAVGVTGLVVTKLDGTAKGGVVFALAREFNIPIRFAGIGERPEDLRVFDP
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCEEECH
VAFVDALLPDALGG
HHHHHHHHHHHCCC
>Mature Secondary Structure
MIEFRVSPTALPMASFFRRNKPTTPDSSRTSRYSLEELAAAFPTAPSAATPASPVEAVPN
CEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCC
AEPEREAAATPVVAPVTPAPAGGEPAAPAAPIPPQITAAPADQLAQEIAARTGQAQSIAA
CCCHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEE
VPSAPAAPAAPAPTALQALPDPIPASAPSAPVVVPPPVVAQPQTVPTPPPAVPAQPVSPL
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHH
QSAAPAVVAPPVAAPPASTPAPAAAAPAGAPPISAAPTVTAPAIVSAPLPSTQDDSIVGQ
HHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCH
REALPAAPAGKPGWRERLRNSTFARSFGGLFSRNPKLDDDLLDEIETALITADVGIGATT
HHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEECCCCCHHH
ALIDGLRKRMKSREFVDAQAMFKALRADLIALLQPVSKPLVIDRSLKPFVVLTVGVNGVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCC
KTTTIGKLAKRFKDEGNSLMLAAGDTFRAAAVAQLQAWGDRNGVAVIAQGQNADAASVAF
CHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH
DALQAAKARGTDVLIADTAGRLHTQTGLMNELGKIRRVLGKIDAAAPHEVLMVIDGTTGQ
HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCH
NAISQLRQFHAAVGVTGLVVTKLDGTAKGGVVFALAREFNIPIRFAGIGERPEDLRVFDP
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCEEECH
VAFVDALLPDALGG
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3025556; 8041620; 9278503; 2161989; 8194520; 9002525 [H]