| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21243263
Identifier: 21243263
GI number: 21243263
Start: 2967983
End: 2970358
Strand: Reverse
Name: 21243263
Synonym: XAC2530
Alternate gene names: NA
Gene position: 2970358-2967983 (Counterclockwise)
Preceding gene: 21243264
Following gene: 21243260
Centisome position: 57.39
GC content: 65.4
Gene sequence:
>2376_bases ATGACGGAAACGCATGCACCCGAACCGACCTGCAACCACACGCCATCGTTGTCGCGGCGGCGCTTTCTGGCCTGGAGCAG CCTGGCAGTTGCTGCAGGCTTCCTGCGCTTTCCGGCCCAGGCCAACGCTGCGCAACCGGGCAGCGTGCGCGCGGTGCCGC TTGCCCAGGTCCGGCTCACGCCATCGTTGTTCCTGGATGCGCTGCACACCAACCGGCGCTACCTGATGCGGCTGCAGCCG GACCGGCTGTTGCACAACTTCGTGCTGTACGCCGGCCTCGACCCGAAGGCGCCAGCCTATGGCGGTTGGGAAGCGGACAC CATCGCCGGGCATACGCTCGGCCACTATCTCAGTGCGCTGGCACTGATGCACGCGCAAACCGGCGATACGCAGTGCCGCA CGCGCACCGGGTATCTGGTCAGCGAATTGGCGCGCTGCCAGGCGCATGCCGGCGATGGCTATGTGGCCGGCTTCACACGC AAGAACGCAGCCGGGCAGATCGAGAGCGGGCGCGCGGTCTTCGACGAGCTCAAGCGCGGCAAGATCGACCCGGCGCCGTT CTATCTCAACGGCAGCTGGGCGCCGCTGTACACCTGGCACAAATTGTTCGCCGGACTGCTCGACGTGCATGCGCATTGCG AAAATGCGCAGGCGCTGCAGGTCGCGGTGGCTCTGGCCGGTTACCTCCAGGGCGTCTTCGCTGCGCTCGACGACGCGCAA TTGCAAAAGGTGCTGTCGTGCGAATTCGGCGGCCTCAACGAATCGTTCGTCGAACTGCATGTGCAAACCGGCGATGCGCA GTGGCTGGCACTGGCGCAGCGCCTGCATCATCACGCCGTGCTCGACCCGTTGATCGCCCAGCGCGACGAACTGGTGCACC AGCATTCCAATACCAATATCCCCAAGCTGATCGGTTTGGCGCGCGAGTACGAAGTCACCGGCGATGCCGCATCGGGCGCC GCAGCGCGCTTCTTCTGGCACACCGTCGCCGACCACCACACCTATGTGATCGGCGGCAACGGCGACCGCGAATATTTTCA GCAGCCGGACAGCATCTCGAAATTCCTTACCGAACAGACTTGCGAGCATTGCGCCAGCTACAACATGCTCAAGCTCACCC GCCACCTGTATCAATGGGGCCCGCAGGCGGAGCTGTTCGATTACTACGAGCGCACGCTGCTCAACCATGTGATGGCACAG CAGCATCCACGCACCGGCATGTTTACCTACATGACGCCGCTGCTGGCCGGCGAAGCGCGTGGTTGGTCGTCGCCGTTCGA CGATTTCTGGTGCTGCGTCGGCAGCGGCATGGAAGCGCACGCGCAGTTCGGCGATTCCATCTACTGGCAGGACGGGCAGG GCGTCTATGTCAACTTATACGTGCCCTCCACGGTGCGCGACGCCGCCGGGCTAAACATGACCTTGCACAGCGCCTTGCCG GAGCAGGGCAGCGCCTCGCTGCGCATCGATGGCGCGCCGCCAGCGCAACGCACGCTCGCACTGCGCGTGCCGGGTTGGGC GCAACAACCGCACCTGCAACTCAATGGCCAACCTGTCGATGGCAGCGCCAGCGATGGCTATCTACGCATCACGCGCGTCT GGCAGCCCGGCGATACCCTGAGCCTGTCGTTCGATATGCCGCTGCGCCTGGAATCCACCCCGGACGATCCCGCCTGGGTC TCGGTGCTGCGCGGCCCGCTGGTGCTCGCCGTGGATCTGGGAGATGCCGCCAAGCCGTGGTCGGGCAAGACCCCGGCATT GATCGGCGGCCAGGAAGTTCTGCAACGCCTGCAGCCAGCGCCGGGCAAGCCAGCCTTCGTTTACACCGATGGCGCGCAGC AGTGGCAGTTTTCGCCGTTCTACGCCCAGTTCGACCGCCGCAGCGCGGTCTACCTGGAACACCGCGACGCCGCCGCATGG CAACAACGCCAGGCCGAACAGGCGGCAGCAGAGGCGAAGCAAGACGCACTCGACACCCGCGCACTCGATCGCATCGCGTT GGGCGATGAAGCCTCCGAAAAGGCGCATGCACTGCAGGGGGAAAATTCCAACCCGCTCAGCTACCGCCGCCGGCCCGGCC GCGACGTGCGTACCGGCGGCTTCATGGCCTTCACCCTGCGCAATACCGCCCAGGCCCGCATCCTGCGCCTGCGCTACTGG GGCGACGAAACCCGCCGCCGCTTCCGCATCCTCGCCGACGGCGAACTCATCGCCAACGAACGCCTGGATGGCAACCGCGG CCTGGATTTCGTCGATGTGGATTACGCTTTGCCGGCAGCAGTGGCCGGCCGCGCCACCTTGCAGATCCGAATCGAACCGG AGAAAGGCTACTCGGCCGGGCCTGCGTTTGGGTGTTGGGTGTTGGAGTCGGTTTGA
Upstream 100 bases:
>100_bases GCAGATGCCATGCCACGGCCAGCATTGCCAGGGGAGCTGCGATCACGTTGTCGCGACCACGCGCGCATGCGTGCGCGCTT TCAGGAGTTAAGCTGATCCC
Downstream 100 bases:
>100_bases GTGTTGCAGCCAGCGCATGTTATTCGTATGACGAGCTGCTACGAGACATCGGGAAGCAGGAAGAGGGGGGCGAATTTATT CGTACCCCTTGAAGCTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 791; Mature: 790
Protein sequence:
>791_residues MTETHAPEPTCNHTPSLSRRRFLAWSSLAVAAGFLRFPAQANAAQPGSVRAVPLAQVRLTPSLFLDALHTNRRYLMRLQP DRLLHNFVLYAGLDPKAPAYGGWEADTIAGHTLGHYLSALALMHAQTGDTQCRTRTGYLVSELARCQAHAGDGYVAGFTR KNAAGQIESGRAVFDELKRGKIDPAPFYLNGSWAPLYTWHKLFAGLLDVHAHCENAQALQVAVALAGYLQGVFAALDDAQ LQKVLSCEFGGLNESFVELHVQTGDAQWLALAQRLHHHAVLDPLIAQRDELVHQHSNTNIPKLIGLAREYEVTGDAASGA AARFFWHTVADHHTYVIGGNGDREYFQQPDSISKFLTEQTCEHCASYNMLKLTRHLYQWGPQAELFDYYERTLLNHVMAQ QHPRTGMFTYMTPLLAGEARGWSSPFDDFWCCVGSGMEAHAQFGDSIYWQDGQGVYVNLYVPSTVRDAAGLNMTLHSALP EQGSASLRIDGAPPAQRTLALRVPGWAQQPHLQLNGQPVDGSASDGYLRITRVWQPGDTLSLSFDMPLRLESTPDDPAWV SVLRGPLVLAVDLGDAAKPWSGKTPALIGGQEVLQRLQPAPGKPAFVYTDGAQQWQFSPFYAQFDRRSAVYLEHRDAAAW QQRQAEQAAAEAKQDALDTRALDRIALGDEASEKAHALQGENSNPLSYRRRPGRDVRTGGFMAFTLRNTAQARILRLRYW GDETRRRFRILADGELIANERLDGNRGLDFVDVDYALPAAVAGRATLQIRIEPEKGYSAGPAFGCWVLESV
Sequences:
>Translated_791_residues MTETHAPEPTCNHTPSLSRRRFLAWSSLAVAAGFLRFPAQANAAQPGSVRAVPLAQVRLTPSLFLDALHTNRRYLMRLQP DRLLHNFVLYAGLDPKAPAYGGWEADTIAGHTLGHYLSALALMHAQTGDTQCRTRTGYLVSELARCQAHAGDGYVAGFTR KNAAGQIESGRAVFDELKRGKIDPAPFYLNGSWAPLYTWHKLFAGLLDVHAHCENAQALQVAVALAGYLQGVFAALDDAQ LQKVLSCEFGGLNESFVELHVQTGDAQWLALAQRLHHHAVLDPLIAQRDELVHQHSNTNIPKLIGLAREYEVTGDAASGA AARFFWHTVADHHTYVIGGNGDREYFQQPDSISKFLTEQTCEHCASYNMLKLTRHLYQWGPQAELFDYYERTLLNHVMAQ QHPRTGMFTYMTPLLAGEARGWSSPFDDFWCCVGSGMEAHAQFGDSIYWQDGQGVYVNLYVPSTVRDAAGLNMTLHSALP EQGSASLRIDGAPPAQRTLALRVPGWAQQPHLQLNGQPVDGSASDGYLRITRVWQPGDTLSLSFDMPLRLESTPDDPAWV SVLRGPLVLAVDLGDAAKPWSGKTPALIGGQEVLQRLQPAPGKPAFVYTDGAQQWQFSPFYAQFDRRSAVYLEHRDAAAW QQRQAEQAAAEAKQDALDTRALDRIALGDEASEKAHALQGENSNPLSYRRRPGRDVRTGGFMAFTLRNTAQARILRLRYW GDETRRRFRILADGELIANERLDGNRGLDFVDVDYALPAAVAGRATLQIRIEPEKGYSAGPAFGCWVLESV >Mature_790_residues TETHAPEPTCNHTPSLSRRRFLAWSSLAVAAGFLRFPAQANAAQPGSVRAVPLAQVRLTPSLFLDALHTNRRYLMRLQPD RLLHNFVLYAGLDPKAPAYGGWEADTIAGHTLGHYLSALALMHAQTGDTQCRTRTGYLVSELARCQAHAGDGYVAGFTRK NAAGQIESGRAVFDELKRGKIDPAPFYLNGSWAPLYTWHKLFAGLLDVHAHCENAQALQVAVALAGYLQGVFAALDDAQL QKVLSCEFGGLNESFVELHVQTGDAQWLALAQRLHHHAVLDPLIAQRDELVHQHSNTNIPKLIGLAREYEVTGDAASGAA ARFFWHTVADHHTYVIGGNGDREYFQQPDSISKFLTEQTCEHCASYNMLKLTRHLYQWGPQAELFDYYERTLLNHVMAQQ HPRTGMFTYMTPLLAGEARGWSSPFDDFWCCVGSGMEAHAQFGDSIYWQDGQGVYVNLYVPSTVRDAAGLNMTLHSALPE QGSASLRIDGAPPAQRTLALRVPGWAQQPHLQLNGQPVDGSASDGYLRITRVWQPGDTLSLSFDMPLRLESTPDDPAWVS VLRGPLVLAVDLGDAAKPWSGKTPALIGGQEVLQRLQPAPGKPAFVYTDGAQQWQFSPFYAQFDRRSAVYLEHRDAAAWQ QRQAEQAAAEAKQDALDTRALDRIALGDEASEKAHALQGENSNPLSYRRRPGRDVRTGGFMAFTLRNTAQARILRLRYWG DETRRRFRILADGELIANERLDGNRGLDFVDVDYALPAAVAGRATLQIRIEPEKGYSAGPAFGCWVLESV
Specific function: Unknown
COG id: COG3533
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87427; Mature: 87296
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETHAPEPTCNHTPSLSRRRFLAWSSLAVAAGFLRFPAQANAAQPGSVRAVPLAQVRLT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEC PSLFLDALHTNRRYLMRLQPDRLLHNFVLYAGLDPKAPAYGGWEADTIAGHTLGHYLSAL HHHHHHHHHCCCEEEEEECHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH ALMHAQTGDTQCRTRTGYLVSELARCQAHAGDGYVAGFTRKNAAGQIESGRAVFDELKRG HHHHCCCCCCCHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCC KIDPAPFYLNGSWAPLYTWHKLFAGLLDVHAHCENAQALQVAVALAGYLQGVFAALDDAQ CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHH LQKVLSCEFGGLNESFVELHVQTGDAQWLALAQRLHHHAVLDPLIAQRDELVHQHSNTNI HHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PKLIGLAREYEVTGDAASGAAARFFWHTVADHHTYVIGGNGDREYFQQPDSISKFLTEQT HHHHHHHHHEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHCCCHHHHHHHHHHH CEHCASYNMLKLTRHLYQWGPQAELFDYYERTLLNHVMAQQHPRTGMFTYMTPLLAGEAR HHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC GWSSPFDDFWCCVGSGMEAHAQFGDSIYWQDGQGVYVNLYVPSTVRDAAGLNMTLHSALP CCCCCHHHHHHHHCCCCHHHHHCCCCEEEECCCCEEEEEEECCHHHHHCCCCEEEHHCCC EQGSASLRIDGAPPAQRTLALRVPGWAQQPHLQLNGQPVDGSASDGYLRITRVWQPGDTL CCCCCEEEECCCCCCCCEEEEECCCCCCCCCEEECCEECCCCCCCCEEEEEEEECCCCEE SLSFDMPLRLESTPDDPAWVSVLRGPLVLAVDLGDAAKPWSGKTPALIGGQEVLQRLQPA EEEECCCEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEECHHHHHHHHCCC PGKPAFVYTDGAQQWQFSPFYAQFDRRSAVYLEHRDAAAWQQRQAEQAAAEAKQDALDTR CCCCEEEEECCCCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH ALDRIALGDEASEKAHALQGENSNPLSYRRRPGRDVRTGGFMAFTLRNTAQARILRLRYW HHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEC GDETRRRFRILADGELIANERLDGNRGLDFVDVDYALPAAVAGRATLQIRIEPEKGYSAG CCHHCCEEEEEECCCEEECCCCCCCCCCCEEEECHHCCHHHCCCEEEEEEEECCCCCCCC PAFGCWVLESV CCEEEEEEECC >Mature Secondary Structure TETHAPEPTCNHTPSLSRRRFLAWSSLAVAAGFLRFPAQANAAQPGSVRAVPLAQVRLT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEC PSLFLDALHTNRRYLMRLQPDRLLHNFVLYAGLDPKAPAYGGWEADTIAGHTLGHYLSAL HHHHHHHHHCCCEEEEEECHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH ALMHAQTGDTQCRTRTGYLVSELARCQAHAGDGYVAGFTRKNAAGQIESGRAVFDELKRG HHHHCCCCCCCHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCC KIDPAPFYLNGSWAPLYTWHKLFAGLLDVHAHCENAQALQVAVALAGYLQGVFAALDDAQ CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHH LQKVLSCEFGGLNESFVELHVQTGDAQWLALAQRLHHHAVLDPLIAQRDELVHQHSNTNI HHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PKLIGLAREYEVTGDAASGAAARFFWHTVADHHTYVIGGNGDREYFQQPDSISKFLTEQT HHHHHHHHHEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHCCCHHHHHHHHHHH CEHCASYNMLKLTRHLYQWGPQAELFDYYERTLLNHVMAQQHPRTGMFTYMTPLLAGEAR HHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC GWSSPFDDFWCCVGSGMEAHAQFGDSIYWQDGQGVYVNLYVPSTVRDAAGLNMTLHSALP CCCCCHHHHHHHHCCCCHHHHHCCCCEEEECCCCEEEEEEECCHHHHHCCCCEEEHHCCC EQGSASLRIDGAPPAQRTLALRVPGWAQQPHLQLNGQPVDGSASDGYLRITRVWQPGDTL CCCCCEEEECCCCCCCCEEEEECCCCCCCCCEEECCEECCCCCCCCEEEEEEEECCCCEE SLSFDMPLRLESTPDDPAWVSVLRGPLVLAVDLGDAAKPWSGKTPALIGGQEVLQRLQPA EEEECCCEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEECHHHHHHHHCCC PGKPAFVYTDGAQQWQFSPFYAQFDRRSAVYLEHRDAAAWQQRQAEQAAAEAKQDALDTR CCCCEEEEECCCCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH ALDRIALGDEASEKAHALQGENSNPLSYRRRPGRDVRTGGFMAFTLRNTAQARILRLRYW HHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEC GDETRRRFRILADGELIANERLDGNRGLDFVDVDYALPAAVAGRATLQIRIEPEKGYSAG CCHHCCEEEEEECCCEEECCCCCCCCCCCEEEECHHCCHHHCCCEEEEEEEECCCCCCCC PAFGCWVLESV CCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA