| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243223
Identifier: 21243223
GI number: 21243223
Start: 2901431
End: 2902315
Strand: Direct
Name: 21243223
Synonym: XAC2490
Alternate gene names: NA
Gene position: 2901431-2902315 (Clockwise)
Preceding gene: 21243222
Following gene: 21243224
Centisome position: 56.06
GC content: 67.46
Gene sequence:
>885_bases ATGCCCGCCCCGTACCCCAGCAGTTGCCGTATGAACATCGTTGTCAAAGAAGAACTCAAGGCCTATATCGACCCGCTGAC GCCCGACGAACACGAGGCGCTGGAACGCAGCCTGCTGGCCGAAGGGTGCCGCGATGCGTTGGTGCTGTGGGGCGATGTGC TGGTGGATGGCCACAACCGCTACGGTATCTGCCAGAAGCACGGCCTGCCGTTCCAGACGGTGCAGAACCCGCGCTTCCAG TCCATGCAGGACGTGCACCTGTGGATGATCGAACAGCACCTGGGCCGGCGCAGCGTGTCCGACTTCCAGCGTGGCGTACT GGCGTTGCGCAAGCGCGAGATCCTGGCCGCGCGCCAACGCAGCCAGCGCGACGCCGACGCCGCTGCCGAAGCGCCGGCCG TGGCCGACGACCAGGCCGACACTGGCCTGGACCAGAGCAGCGCACACGCCGCTGACGACAACGACAGCCCGCCGTGGGAA GAAAGCTCCAGCCCGGTGAGCCGTGCCGAGCTGGCACGCGAAGCGCGCCTGAGCAGCAACCAGGTGGTGATGATCGAACG CATCCATAAGCAGGCCGCGCCGGAAGTGGTGCAGGCGGTCAAGGCGGGCGAGATTTCGATCAGCGCCGCCGCTGCGGTGG CCACGCTGTCCGAGGACGAACAACGCGCCGCCGCGCAGGCCGGCAAGGCCGAGCTCAAACAGGCCGCCAAGCGTGTGCGC GACGCCAAGCGCAAGCCCAAGGCCGACGAAGCCGAAGGTGGCGGAGCCGAACGCCGCGACATCAAGGCCCTGCAGCGCCG CGTCACCGAACTGGAAGACGAAAATGCCGCGCTGCAATCGAAGGTGACCGCACTGCAGGCCCAGTTGGAACGCCTGCGCG GCTGA
Upstream 100 bases:
>100_bases GGCCACGGGCGATGACCACAAACTGCGCTGGCGACGGGCGCCCGCGTGTCACGCATGCAGGCACCCGTCAAGCGCGCAAA GCCGGGGCAGGCTCACTACA
Downstream 100 bases:
>100_bases GTGCACCCGACAGTCGACGGCAACACGTAGGAGCGCACCTGGGCGCGAAAGGCATTCCCCGATAAAGCCCGTCGCGCCCA GGCGCGCGCCAACGGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MPAPYPSSCRMNIVVKEELKAYIDPLTPDEHEALERSLLAEGCRDALVLWGDVLVDGHNRYGICQKHGLPFQTVQNPRFQ SMQDVHLWMIEQHLGRRSVSDFQRGVLALRKREILAARQRSQRDADAAAEAPAVADDQADTGLDQSSAHAADDNDSPPWE ESSSPVSRAELAREARLSSNQVVMIERIHKQAAPEVVQAVKAGEISISAAAAVATLSEDEQRAAAQAGKAELKQAAKRVR DAKRKPKADEAEGGGAERRDIKALQRRVTELEDENAALQSKVTALQAQLERLRG
Sequences:
>Translated_294_residues MPAPYPSSCRMNIVVKEELKAYIDPLTPDEHEALERSLLAEGCRDALVLWGDVLVDGHNRYGICQKHGLPFQTVQNPRFQ SMQDVHLWMIEQHLGRRSVSDFQRGVLALRKREILAARQRSQRDADAAAEAPAVADDQADTGLDQSSAHAADDNDSPPWE ESSSPVSRAELAREARLSSNQVVMIERIHKQAAPEVVQAVKAGEISISAAAAVATLSEDEQRAAAQAGKAELKQAAKRVR DAKRKPKADEAEGGGAERRDIKALQRRVTELEDENAALQSKVTALQAQLERLRG >Mature_293_residues PAPYPSSCRMNIVVKEELKAYIDPLTPDEHEALERSLLAEGCRDALVLWGDVLVDGHNRYGICQKHGLPFQTVQNPRFQS MQDVHLWMIEQHLGRRSVSDFQRGVLALRKREILAARQRSQRDADAAAEAPAVADDQADTGLDQSSAHAADDNDSPPWEE SSSPVSRAELAREARLSSNQVVMIERIHKQAAPEVVQAVKAGEISISAAAAVATLSEDEQRAAAQAGKAELKQAAKRVRD AKRKPKADEAEGGGAERRDIKALQRRVTELEDENAALQSKVTALQAQLERLRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32287; Mature: 32156
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPYPSSCRMNIVVKEELKAYIDPLTPDEHEALERSLLAEGCRDALVLWGDVLVDGHNR CCCCCCCCCEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YGICQKHGLPFQTVQNPRFQSMQDVHLWMIEQHLGRRSVSDFQRGVLALRKREILAARQR CCCHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SQRDADAAAEAPAVADDQADTGLDQSSAHAADDNDSPPWEESSSPVSRAELAREARLSSN HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC QVVMIERIHKQAAPEVVQAVKAGEISISAAAAVATLSEDEQRAAAQAGKAELKQAAKRVR CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAKRKPKADEAEGGGAERRDIKALQRRVTELEDENAALQSKVTALQAQLERLRG HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PAPYPSSCRMNIVVKEELKAYIDPLTPDEHEALERSLLAEGCRDALVLWGDVLVDGHNR CCCCCCCCEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YGICQKHGLPFQTVQNPRFQSMQDVHLWMIEQHLGRRSVSDFQRGVLALRKREILAARQR CCCHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SQRDADAAAEAPAVADDQADTGLDQSSAHAADDNDSPPWEESSSPVSRAELAREARLSSN HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC QVVMIERIHKQAAPEVVQAVKAGEISISAAAAVATLSEDEQRAAAQAGKAELKQAAKRVR CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAKRKPKADEAEGGGAERRDIKALQRRVTELEDENAALQSKVTALQAQLERLRG HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA