| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is ygjG [C]
Identifier: 21243222
GI number: 21243222
Start: 2899970
End: 2901322
Strand: Direct
Name: ygjG [C]
Synonym: XAC2489
Alternate gene names: 21243222
Gene position: 2899970-2901322 (Clockwise)
Preceding gene: 21243216
Following gene: 21243223
Centisome position: 56.03
GC content: 66.89
Gene sequence:
>1353_bases ATGCCCGACCACCTTCCCAGCGATGCCGCCGATGCGCTGCAGGCACCGACGCAGCTGGATGCCTTCTGGATGCCGTTCAC CGCCAATCGCCAGTTCAAGGCACGGCCTCGCCTGCTGGCCTCGGCGCAGGGCATGTATTACCGCGATGTCCAAGGACGCC AGATTCTGGACGGCACGGCAGGCCTGTGGTGCTGCAATGCAGGACATAGCCGCGAGCGCATCGTGGCAGCCATCCGCGAC CAGGCCGGCACGCTGGATTTCGCGCCGACCTTCCAGATGGGCTCGCCGCTGCCCTTCGTGCTGGCGCAGCGGTTGGCCGC AATCGCCCCGCCGGGCCTGGGCCATGTGTTCTTCACCAACTCCGGCTCGGAAGCGGTGGATAGCGCGATGAAGATCGTGC TTGCCTACCACCGGCTGCGCGGCGAAGGCCAGCGCACCCGCTTCATCGGTCGCGAGAAGGCCTACCACGGGGTCGGCTTC GGCGGCATGTCGATCGGCGGGCTGCCCAACAACCGCAAGTGGTTCGGCCCATTGCTGGCCGGCACCGACCATTTGCCGCA TACGCTGGATCTGCAGCACAACGCCTACGCGCGCGGGCTGCCTGTGCATGGCGCGGAACTGGCCGACGATCTGGAACGGC TGATCACCTTGCACGATGCGTCCACCATCGCGGCGGTTTTCGTCGAACCGGTGTCCGGTTCGGCCGGTGTGATCCTGCCG CCGGAGGGCTACCTGCAGCGGTTGCGCGCCATCTGCGACCGCCACGGCATTGTATTGGTGTTCGACGAGGTGATCACCGG CTTCGGCCGCGTGGGCGACGCCTTCGCCGCACAGCGCTTCGGCGTCATCCCGGACATCATCACCGCCGCCAAGGGCCTGA CCAGCGGCACCGTGCCGATGGGCGCGGTGCTGGTGGCCGATGCGATCCACGATGCCTTCATGCACGGGCCGCAAAACGCG ATCGAGCTCTTTCACGGCTACACCTATTCCGGCCATCCGCTGGCCTGTGCAGCGGCGATCGCCACGCTGGACACCTATGC CGAGGAAGAGCTGTTCACGCGCGCGATCACGCTTGGCCCGCAGTGGGAAGACGCATTGCACGGCCTGCGCGGCTCGCCGC ATGTGATCGACATCCGCAACATCGGCCTGATCGGCGCGATCGAACTGGCACCACGCGACGGCGCCCCGGGCGCGCGCGGT TACGACGTCTTCGAGCGCTGTTTCCACGAGGGCGGCCTGCTGGTGCGCGTCACCGGCGATGTCATCGCACTGTCACCGCC GCTGATCGTCACCCCGGAGCAGATCGGGCAGATGGTGGAGACGCTAGGCAAGATTCTTCGCCAGGTGGACTAA
Upstream 100 bases:
>100_bases TGCACGACGCGCCTGCTTGCTGTGCGTCTGCGGGCGTCTCAGGTGACGGCCCAGGCGCCAGCTGCGTACAGTCGGGCGAT CCCGAACGACGGAGCCTGCC
Downstream 100 bases:
>100_bases GCCCGGCTGGCCACGGGCGATGACCACAAACTGCGCTGGCGACGGGCGCCCGCGTGTCACGCATGCAGGCACCCGTCAAG CGCGCAAAGCCGGGGCAGGC
Product: beta alanine--pyruvate transaminase
Products: NA
Alternate protein names: Omega-APT; Beta-alanine--pyruvate aminotransferase [H]
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MPDHLPSDAADALQAPTQLDAFWMPFTANRQFKARPRLLASAQGMYYRDVQGRQILDGTAGLWCCNAGHSRERIVAAIRD QAGTLDFAPTFQMGSPLPFVLAQRLAAIAPPGLGHVFFTNSGSEAVDSAMKIVLAYHRLRGEGQRTRFIGREKAYHGVGF GGMSIGGLPNNRKWFGPLLAGTDHLPHTLDLQHNAYARGLPVHGAELADDLERLITLHDASTIAAVFVEPVSGSAGVILP PEGYLQRLRAICDRHGIVLVFDEVITGFGRVGDAFAAQRFGVIPDIITAAKGLTSGTVPMGAVLVADAIHDAFMHGPQNA IELFHGYTYSGHPLACAAAIATLDTYAEEELFTRAITLGPQWEDALHGLRGSPHVIDIRNIGLIGAIELAPRDGAPGARG YDVFERCFHEGGLLVRVTGDVIALSPPLIVTPEQIGQMVETLGKILRQVD
Sequences:
>Translated_450_residues MPDHLPSDAADALQAPTQLDAFWMPFTANRQFKARPRLLASAQGMYYRDVQGRQILDGTAGLWCCNAGHSRERIVAAIRD QAGTLDFAPTFQMGSPLPFVLAQRLAAIAPPGLGHVFFTNSGSEAVDSAMKIVLAYHRLRGEGQRTRFIGREKAYHGVGF GGMSIGGLPNNRKWFGPLLAGTDHLPHTLDLQHNAYARGLPVHGAELADDLERLITLHDASTIAAVFVEPVSGSAGVILP PEGYLQRLRAICDRHGIVLVFDEVITGFGRVGDAFAAQRFGVIPDIITAAKGLTSGTVPMGAVLVADAIHDAFMHGPQNA IELFHGYTYSGHPLACAAAIATLDTYAEEELFTRAITLGPQWEDALHGLRGSPHVIDIRNIGLIGAIELAPRDGAPGARG YDVFERCFHEGGLLVRVTGDVIALSPPLIVTPEQIGQMVETLGKILRQVD >Mature_449_residues PDHLPSDAADALQAPTQLDAFWMPFTANRQFKARPRLLASAQGMYYRDVQGRQILDGTAGLWCCNAGHSRERIVAAIRDQ AGTLDFAPTFQMGSPLPFVLAQRLAAIAPPGLGHVFFTNSGSEAVDSAMKIVLAYHRLRGEGQRTRFIGREKAYHGVGFG GMSIGGLPNNRKWFGPLLAGTDHLPHTLDLQHNAYARGLPVHGAELADDLERLITLHDASTIAAVFVEPVSGSAGVILPP EGYLQRLRAICDRHGIVLVFDEVITGFGRVGDAFAAQRFGVIPDIITAAKGLTSGTVPMGAVLVADAIHDAFMHGPQNAI ELFHGYTYSGHPLACAAAIATLDTYAEEELFTRAITLGPQWEDALHGLRGSPHVIDIRNIGLIGAIELAPRDGAPGARGY DVFERCFHEGGLLVRVTGDVIALSPPLIVTPEQIGQMVETLGKILRQVD
Specific function: Catalyzes transamination between a variety of omega- amino acids, mono and diamines, and pyruvate. Plays a pivotal role in the metabolism of the omega amino acids [H]
COG id: COG0161
COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557809, Length=438, Percent_Identity=29.4520547945205, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI284507298, Length=332, Percent_Identity=30.7228915662651, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI37574042, Length=428, Percent_Identity=29.4392523364486, Blast_Score=135, Evalue=9e-32, Organism=Homo sapiens, GI226442705, Length=428, Percent_Identity=29.4392523364486, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI13994255, Length=441, Percent_Identity=27.891156462585, Blast_Score=130, Evalue=4e-30, Organism=Homo sapiens, GI226442709, Length=392, Percent_Identity=29.5918367346939, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI24119277, Length=437, Percent_Identity=26.5446224256293, Blast_Score=122, Evalue=6e-28, Organism=Escherichia coli, GI145693181, Length=402, Percent_Identity=32.5870646766169, Blast_Score=197, Evalue=1e-51, Organism=Escherichia coli, GI1786991, Length=435, Percent_Identity=31.264367816092, Blast_Score=167, Evalue=1e-42, Organism=Escherichia coli, GI1789759, Length=432, Percent_Identity=30.5555555555556, Blast_Score=161, Evalue=8e-41, Organism=Escherichia coli, GI1789016, Length=414, Percent_Identity=31.1594202898551, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1787560, Length=438, Percent_Identity=30.8219178082192, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI1788044, Length=402, Percent_Identity=28.6069651741293, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1786349, Length=335, Percent_Identity=28.955223880597, Blast_Score=95, Evalue=1e-20, Organism=Caenorhabditis elegans, GI25144271, Length=422, Percent_Identity=27.9620853080569, Blast_Score=157, Evalue=9e-39, Organism=Caenorhabditis elegans, GI32564660, Length=439, Percent_Identity=27.5626423690205, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI25144274, Length=298, Percent_Identity=29.8657718120805, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI71992977, Length=445, Percent_Identity=26.7415730337079, Blast_Score=128, Evalue=8e-30, Organism=Saccharomyces cerevisiae, GI6323470, Length=437, Percent_Identity=27.6887871853547, Blast_Score=169, Evalue=9e-43, Organism=Saccharomyces cerevisiae, GI6324386, Length=443, Percent_Identity=26.410835214447, Blast_Score=141, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6324432, Length=430, Percent_Identity=26.046511627907, Blast_Score=115, Evalue=1e-26, Organism=Drosophila melanogaster, GI21357415, Length=417, Percent_Identity=26.8585131894484, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI161085790, Length=441, Percent_Identity=28.7981859410431, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI28574759, Length=429, Percent_Identity=29.1375291375291, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI21356575, Length=434, Percent_Identity=28.110599078341, Blast_Score=115, Evalue=8e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005814 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =2.6.1.18 [H]
Molecular weight: Translated: 48332; Mature: 48201
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDHLPSDAADALQAPTQLDAFWMPFTANRQFKARPRLLASAQGMYYRDVQGRQILDGTA CCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCEEECCCCCEEECCCC GLWCCNAGHSRERIVAAIRDQAGTLDFAPTFQMGSPLPFVLAQRLAAIAPPGLGHVFFTN CEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC SGSEAVDSAMKIVLAYHRLRGEGQRTRFIGREKAYHGVGFGGMSIGGLPNNRKWFGPLLA CCHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCCCCCCCEECCCCCCCCCCCHHHC GTDHLPHTLDLQHNAYARGLPVHGAELADDLERLITLHDASTIAAVFVEPVSGSAGVILP CCCCCCCEEECCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEC PEGYLQRLRAICDRHGIVLVFDEVITGFGRVGDAFAAQRFGVIPDIITAAKGLTSGTVPM CHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCH GAVLVADAIHDAFMHGPQNAIELFHGYTYSGHPLACAAAIATLDTYAEEELFTRAITLGP HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC QWEDALHGLRGSPHVIDIRNIGLIGAIELAPRDGAPGARGYDVFERCFHEGGLLVRVTGD CHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECC VIALSPPLIVTPEQIGQMVETLGKILRQVD EEEECCCEEECHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PDHLPSDAADALQAPTQLDAFWMPFTANRQFKARPRLLASAQGMYYRDVQGRQILDGTA CCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCEEECCCCCEEECCCC GLWCCNAGHSRERIVAAIRDQAGTLDFAPTFQMGSPLPFVLAQRLAAIAPPGLGHVFFTN CEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC SGSEAVDSAMKIVLAYHRLRGEGQRTRFIGREKAYHGVGFGGMSIGGLPNNRKWFGPLLA CCHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCCCCCCCEECCCCCCCCCCCHHHC GTDHLPHTLDLQHNAYARGLPVHGAELADDLERLITLHDASTIAAVFVEPVSGSAGVILP CCCCCCCEEECCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEC PEGYLQRLRAICDRHGIVLVFDEVITGFGRVGDAFAAQRFGVIPDIITAAKGLTSGTVPM CHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCH GAVLVADAIHDAFMHGPQNAIELFHGYTYSGHPLACAAAIATLDTYAEEELFTRAITLGP HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC QWEDALHGLRGSPHVIDIRNIGLIGAIELAPRDGAPGARGYDVFERCFHEGGLLVRVTGD CHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECC VIALSPPLIVTPEQIGQMVETLGKILRQVD EEEECCCEEECHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1618757; 6822556; 2500426 [H]