| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is ybeZ [H]
Identifier: 21243195
GI number: 21243195
Start: 2866868
End: 2867854
Strand: Direct
Name: ybeZ [H]
Synonym: XAC2462
Alternate gene names: 21243195
Gene position: 2866868-2867854 (Clockwise)
Preceding gene: 77748655
Following gene: 77748656
Centisome position: 55.39
GC content: 63.12
Gene sequence:
>987_bases ATGAACGCACCCGCACATCGCGATTTCACCCTGGAACCCGAGGACATCGAGCGCCTGGCCAATCTGGCCGGTCCGTTCGA TACGCATCTGCGCCAGATCGAACTCAAGCTTGGCGTCGAGATCGCCAACCGTGGCAACGTCTTCCGGGTGACCGGACCGG AGCCGGCCATCGCCGCCGCCCAGTCGCTGTTGACCGCGTTGTACGAGGAGGCCGCAACCACCACCTTCGACACGCACGCA ATCCACCTGCGGCTCAACGAGGCCAACCTCGAACATGTGGCCGAGCGCGCGTACCAGGCCCAGGATGTGGCGATCAAGGT CAAGCGCGGCACCGTGCGCGGCCGTGGCGCCAACCAGGCCAAATACCTGCACGCGATCGCCACCCACGACATCAATTTCG GCATCGGTCCGGCCGGGACCGGCAAGACCTTCCTGGCGGTAGCAAGCGCGGTTGAAGCGCTCAACGAGTCGCGTGTGCAG CGGCTGATTCTGGTGCGCCCGGCAGTGGAAGCCGGCGAAAAACTCGGCTTTCTGCCTGGCGATCTCAGCCAGAAGGTCGA CCCGTACCTGCGCCCGCTCTACGATGCGCTGTACGAGATGCTCGGCGTGGAAAAAGTGGTCAAGTTGCTGGAGCGCAACG TCATCGAAATCGCGCCGCTGGCCTATATGCGCGGCCGCACGCTCAACGATGCCTACGTGATTCTGGACGAAGCGCAGAAC ACCACCATCGAACAGATGAAGATGTTCCTGACCCGCCTGGGCTTCGGCTCCACGGCGGTGGTCACCGGCGATCTCACCCA GATCGATCTGCCCAAGCATGTCAAATCCGGCCTGCGCGATGCGATCGAAGTGCTGCGCGATGTGGAAGGCACCAGTTTCA CCTTCTTCGAAGCGCGCGACGTGGTGCGTCACCCATTGGTGCAGCGCATCGTGACCGCCTATGACAAGCGCGATCTGGCC GAAAAGCCTGCCGAACCTGCGGCATGA
Upstream 100 bases:
>100_bases GTGCCGCGCCGTCCGCTGTGTTGGTGGGATCACATGCCGCGCGCTACCCTTTCGCTCCCGCCCTACCGACGCGCACCCAG GTGCGCTGTCCGATCCAACC
Downstream 100 bases:
>100_bases AGCAGGCTGGCGGGAGGTGACCGCGGATGCCCTGCTCGGCACGACCCGGTGCAACGCGGGACACGCCGGGAAACCTCCAA GTAGCGCGGTCATCGCACAG
Product: ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MNAPAHRDFTLEPEDIERLANLAGPFDTHLRQIELKLGVEIANRGNVFRVTGPEPAIAAAQSLLTALYEEAATTTFDTHA IHLRLNEANLEHVAERAYQAQDVAIKVKRGTVRGRGANQAKYLHAIATHDINFGIGPAGTGKTFLAVASAVEALNESRVQ RLILVRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALYEMLGVEKVVKLLERNVIEIAPLAYMRGRTLNDAYVILDEAQN TTIEQMKMFLTRLGFGSTAVVTGDLTQIDLPKHVKSGLRDAIEVLRDVEGTSFTFFEARDVVRHPLVQRIVTAYDKRDLA EKPAEPAA
Sequences:
>Translated_328_residues MNAPAHRDFTLEPEDIERLANLAGPFDTHLRQIELKLGVEIANRGNVFRVTGPEPAIAAAQSLLTALYEEAATTTFDTHA IHLRLNEANLEHVAERAYQAQDVAIKVKRGTVRGRGANQAKYLHAIATHDINFGIGPAGTGKTFLAVASAVEALNESRVQ RLILVRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALYEMLGVEKVVKLLERNVIEIAPLAYMRGRTLNDAYVILDEAQN TTIEQMKMFLTRLGFGSTAVVTGDLTQIDLPKHVKSGLRDAIEVLRDVEGTSFTFFEARDVVRHPLVQRIVTAYDKRDLA EKPAEPAA >Mature_328_residues MNAPAHRDFTLEPEDIERLANLAGPFDTHLRQIELKLGVEIANRGNVFRVTGPEPAIAAAQSLLTALYEEAATTTFDTHA IHLRLNEANLEHVAERAYQAQDVAIKVKRGTVRGRGANQAKYLHAIATHDINFGIGPAGTGKTFLAVASAVEALNESRVQ RLILVRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALYEMLGVEKVVKLLERNVIEIAPLAYMRGRTLNDAYVILDEAQN TTIEQMKMFLTRLGFGSTAVVTGDLTQIDLPKHVKSGLRDAIEVLRDVEGTSFTFFEARDVVRHPLVQRIVTAYDKRDLA EKPAEPAA
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=323, Percent_Identity=61.3003095975232, Blast_Score=376, Evalue=1e-105, Organism=Escherichia coli, GI1787257, Length=202, Percent_Identity=49.5049504950495, Blast_Score=192, Evalue=2e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 36155; Mature: 36155
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPAHRDFTLEPEDIERLANLAGPFDTHLRQIELKLGVEIANRGNVFRVTGPEPAIAAA CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCEEEECCCCHHHHHH QSLLTALYEEAATTTFDTHAIHLRLNEANLEHVAERAYQAQDVAIKVKRGTVRGRGANQA HHHHHHHHHHHHCCEECCEEEEEEECCCCHHHHHHHHHHHHCEEEEEECCCCCCCCCCHH KYLHAIATHDINFGIGPAGTGKTFLAVASAVEALNESRVQRLILVRPAVEAGEKLGFLPG HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCCCC DLSQKVDPYLRPLYDALYEMLGVEKVVKLLERNVIEIAPLAYMRGRTLNDAYVILDEAQN CHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCC TTIEQMKMFLTRLGFGSTAVVTGDLTQIDLPKHVKSGLRDAIEVLRDVEGTSFTFFEARD CHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHH VVRHPLVQRIVTAYDKRDLAEKPAEPAA HHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNAPAHRDFTLEPEDIERLANLAGPFDTHLRQIELKLGVEIANRGNVFRVTGPEPAIAAA CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCEEEECCCCHHHHHH QSLLTALYEEAATTTFDTHAIHLRLNEANLEHVAERAYQAQDVAIKVKRGTVRGRGANQA HHHHHHHHHHHHCCEECCEEEEEEECCCCHHHHHHHHHHHHCEEEEEECCCCCCCCCCHH KYLHAIATHDINFGIGPAGTGKTFLAVASAVEALNESRVQRLILVRPAVEAGEKLGFLPG HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCCCC DLSQKVDPYLRPLYDALYEMLGVEKVVKLLERNVIEIAPLAYMRGRTLNDAYVILDEAQN CHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCC TTIEQMKMFLTRLGFGSTAVVTGDLTQIDLPKHVKSGLRDAIEVLRDVEGTSFTFFEARD CHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHH VVRHPLVQRIVTAYDKRDLAEKPAEPAA HHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]