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The map label for this gene is ydiU [C]

Identifier: 21243126

GI number: 21243126

Start: 2786886

End: 2788442

Strand: Reverse

Name: ydiU [C]

Synonym: XAC2392

Alternate gene names: 21243126

Gene position: 2788442-2786886 (Counterclockwise)

Preceding gene: 21243128

Following gene: 21243125

Centisome position: 53.88

GC content: 67.24

Gene sequence:

>1557_bases
ATGACACACCTGCGCTTCGATAATCGTCTGCGTCAACAGCTGCCTGGCGACCCGGAAGAGGGTTCGCGCCGGCGCGAGGT
GAGCGTTGCTTGGTCGGCAGTCCTGCCGACGCCGGTCGCTGCTCCGTCCCTGATCGCGCATTCGGCGGAGATGGCGCAGG
TGCTGGGCCTGGATGCAGCCGAGATCGCCAGTGCGCAGTTCGCCCAGGTGTTCGGCGGCAATGCGCTGTACCCGGGAATG
CAGCCTTGGGCGGTCAACTACGGTGGGCACCAATTCGGGCATTGGGCCGGGCAGCTTGGCGACGGGCGGGCGATCTCGCT
AGGTGAGGCGATCGGAACCGACGGCGGTCGCTACGAATTGCAACTCAAGGGTGCCGGCCCGACGCCGTATTCGCGCGGCG
CCGATGGGCGCGCCGTGTTGCGCTCGTCGATCCGCGAATTCCTGTGCAGCGAGGCCATGCATCATCTGGGCGTGCCGACC
ACGCGTGCCTTGAGCCTGGTCGGCACCGGCGATGCGGTGGTGCGCGACATGTTCTACGACGGCCACCCGCAACGCGAGCC
GGGCGCGATCGTATGCCGGGTGGCGCCCTCGTTCATCCGCTTCGGCAACTTCGAATTGCCCAGCGCACGCGGCGATATCG
CCTTGCTGCGGCAGTGGGTGGATTTCACCATCGCCCGCGATTTCCCGGCGTTGGCCGGTGCCGGCGAGGCGCTCTACGCC
GGCTGGTTCGCGCAGGTCTGCGAGCGCACCGCAGTGATGGTGGCGCACTGGATGCGGGTCGGGTTCGTGCATGGGGTGAT
GAATACCGACAACATGTCCATCCTCGGTTTGACCATCGACTATGGCCCGTATGGCTGGGTCGACGACTACGACCCGGACT
GGACGCCCAATACCACCGACGCGCAGGGGCGGCGCTATCGCTTCGGCACCCAGCCGCAAGTGGCCTACTGGAACCTGGGC
CGGCTTGCCCAGGCGCTGGCGCCGCTGTTTCCCGACCAGGCCCCGCTGCAACACGGGCTGGACCGTTTTCGCGATACCTA
CCTGGCGTGCGACCGGCACGATACCGCTGCCAAGCTGGGGTTGGCAGAGTGTCGCGACGAGGATCTGCAGCTGATCGATG
CGCTGCGCGCACTGATGCGCGAATCCGAGATGGACATGACGCTGACCTTCCGTGGCCTGATCGACCTGTCGCCCGACCAT
CCGGACCCCGCGCAGCTGCGCGAGGCCTTTTACGACGAAGACAAACGCGTTGCGGATGCGCCGCAGCTGCAGCAATGGCT
GCAGCGCTACGCCGCGCGCCTGCAGCAGGATCCATTGCCGCCGGACGCGCGCCGCGCGCGCATGCGCCTGGCCAACCCGC
GCTACGTGTTGCGCAATTATCTGGCGCAGCAGGCGATCGACCGCGCCGAACAAGGGGACCCGTCCGGGGTGCAGGAGTTG
CTGGAGGTCATGCGCCACCCATACGACGATCAGCCCGGGCGCGATGCATTTGCGGCGCGGCGGCCGGAATGGGCACGCGA
TCGCGCTGGGTGTTCGATGCTGTCGTGCAGTTCCTGA

Upstream 100 bases:

>100_bases
GCTCGGCACACGCCAATCGAGTGAAGATACGGTGCGCGGGCAGCGCCGGATGCGGTATCGCCCATGCCAGGTTCACCGCC
GGTGGCCTAGGCTTGCCGGC

Downstream 100 bases:

>100_bases
CGCGCTCAGATGCAGGTATGCCGTAAATCCGGCGTGGATGGCGTACGCAGCCTAGAATAGGCGCAACCCCACCGGCCACC
ACGCCACCGCCCTCATGACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 517

Protein sequence:

>518_residues
MTHLRFDNRLRQQLPGDPEEGSRRREVSVAWSAVLPTPVAAPSLIAHSAEMAQVLGLDAAEIASAQFAQVFGGNALYPGM
QPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGTDGGRYELQLKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHHLGVPT
TRALSLVGTGDAVVRDMFYDGHPQREPGAIVCRVAPSFIRFGNFELPSARGDIALLRQWVDFTIARDFPALAGAGEALYA
GWFAQVCERTAVMVAHWMRVGFVHGVMNTDNMSILGLTIDYGPYGWVDDYDPDWTPNTTDAQGRRYRFGTQPQVAYWNLG
RLAQALAPLFPDQAPLQHGLDRFRDTYLACDRHDTAAKLGLAECRDEDLQLIDALRALMRESEMDMTLTFRGLIDLSPDH
PDPAQLREAFYDEDKRVADAPQLQQWLQRYAARLQQDPLPPDARRARMRLANPRYVLRNYLAQQAIDRAEQGDPSGVQEL
LEVMRHPYDDQPGRDAFAARRPEWARDRAGCSMLSCSS

Sequences:

>Translated_518_residues
MTHLRFDNRLRQQLPGDPEEGSRRREVSVAWSAVLPTPVAAPSLIAHSAEMAQVLGLDAAEIASAQFAQVFGGNALYPGM
QPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGTDGGRYELQLKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHHLGVPT
TRALSLVGTGDAVVRDMFYDGHPQREPGAIVCRVAPSFIRFGNFELPSARGDIALLRQWVDFTIARDFPALAGAGEALYA
GWFAQVCERTAVMVAHWMRVGFVHGVMNTDNMSILGLTIDYGPYGWVDDYDPDWTPNTTDAQGRRYRFGTQPQVAYWNLG
RLAQALAPLFPDQAPLQHGLDRFRDTYLACDRHDTAAKLGLAECRDEDLQLIDALRALMRESEMDMTLTFRGLIDLSPDH
PDPAQLREAFYDEDKRVADAPQLQQWLQRYAARLQQDPLPPDARRARMRLANPRYVLRNYLAQQAIDRAEQGDPSGVQEL
LEVMRHPYDDQPGRDAFAARRPEWARDRAGCSMLSCSS
>Mature_517_residues
THLRFDNRLRQQLPGDPEEGSRRREVSVAWSAVLPTPVAAPSLIAHSAEMAQVLGLDAAEIASAQFAQVFGGNALYPGMQ
PWAVNYGGHQFGHWAGQLGDGRAISLGEAIGTDGGRYELQLKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHHLGVPTT
RALSLVGTGDAVVRDMFYDGHPQREPGAIVCRVAPSFIRFGNFELPSARGDIALLRQWVDFTIARDFPALAGAGEALYAG
WFAQVCERTAVMVAHWMRVGFVHGVMNTDNMSILGLTIDYGPYGWVDDYDPDWTPNTTDAQGRRYRFGTQPQVAYWNLGR
LAQALAPLFPDQAPLQHGLDRFRDTYLACDRHDTAAKLGLAECRDEDLQLIDALRALMRESEMDMTLTFRGLIDLSPDHP
DPAQLREAFYDEDKRVADAPQLQQWLQRYAARLQQDPLPPDARRARMRLANPRYVLRNYLAQQAIDRAEQGDPSGVQELL
EVMRHPYDDQPGRDAFAARRPEWARDRAGCSMLSCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family

Homologues:

Organism=Homo sapiens, GI32880229, Length=592, Percent_Identity=41.2162162162162, Blast_Score=345, Evalue=5e-95,
Organism=Escherichia coli, GI1787999, Length=495, Percent_Identity=45.6565656565657, Blast_Score=384, Evalue=1e-107,
Organism=Saccharomyces cerevisiae, GI6325034, Length=352, Percent_Identity=38.0681818181818, Blast_Score=213, Evalue=4e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2392_XANAC (Q8PJY5)

Other databases:

- EMBL:   AE008923
- RefSeq:   NP_642708.1
- GeneID:   1156463
- GenomeReviews:   AE008923_GR
- KEGG:   xac:XAC2392
- NMPDR:   fig|190486.1.peg.2352
- HOGENOM:   HBG683993
- OMA:   FGSYNPR
- ProtClustDB:   PRK00029
- BioCyc:   XAXO190486:XAC2392-MONOMER
- HAMAP:   MF_00692
- InterPro:   IPR003846

Pfam domain/function: PF02696 UPF0061

EC number: NA

Molecular weight: Translated: 57578; Mature: 57447

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHLRFDNRLRQQLPGDPEEGSRRREVSVAWSAVLPTPVAAPSLIAHSAEMAQVLGLDAA
CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHH
EIASAQFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGTDGGRYEL
HHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHCCCCCCCEEECCHHHCCCCCEEEE
QLKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHHLGVPTTRALSLVGTGDAVVRDMFYD
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCCHHHHHHHHHC
GHPQREPGAIVCRVAPSFIRFGNFELPSARGDIALLRQWVDFTIARDFPALAGAGEALYA
CCCCCCCCEEEEEECHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHH
GWFAQVCERTAVMVAHWMRVGFVHGVMNTDNMSILGLTIDYGPYGWVDDYDPDWTPNTTD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC
AQGRRYRFGTQPQVAYWNLGRLAQALAPLFPDQAPLQHGLDRFRDTYLACDRHDTAAKLG
CCCCEEECCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHC
LAECRDEDLQLIDALRALMRESEMDMTLTFRGLIDLSPDHPDPAQLREAFYDEDKRVADA
HHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHHHHHHHCCCCHHCCC
PQLQQWLQRYAARLQQDPLPPDARRARMRLANPRYVLRNYLAQQAIDRAEQGDPSGVQEL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LEVMRHPYDDQPGRDAFAARRPEWARDRAGCSMLSCSS
HHHHHCCCCCCCCCCHHHHCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure 
THLRFDNRLRQQLPGDPEEGSRRREVSVAWSAVLPTPVAAPSLIAHSAEMAQVLGLDAA
CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHH
EIASAQFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGTDGGRYEL
HHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHCCCCCCCEEECCHHHCCCCCEEEE
QLKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHHLGVPTTRALSLVGTGDAVVRDMFYD
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCCHHHHHHHHHC
GHPQREPGAIVCRVAPSFIRFGNFELPSARGDIALLRQWVDFTIARDFPALAGAGEALYA
CCCCCCCCEEEEEECHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHH
GWFAQVCERTAVMVAHWMRVGFVHGVMNTDNMSILGLTIDYGPYGWVDDYDPDWTPNTTD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC
AQGRRYRFGTQPQVAYWNLGRLAQALAPLFPDQAPLQHGLDRFRDTYLACDRHDTAAKLG
CCCCEEECCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHC
LAECRDEDLQLIDALRALMRESEMDMTLTFRGLIDLSPDHPDPAQLREAFYDEDKRVADA
HHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHHHHHHHCCCCHHCCC
PQLQQWLQRYAARLQQDPLPPDARRARMRLANPRYVLRNYLAQQAIDRAEQGDPSGVQEL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LEVMRHPYDDQPGRDAFAARRPEWARDRAGCSMLSCSS
HHHHHCCCCCCCCCCHHHHCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12024217