| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is apt
Identifier: 21243125
GI number: 21243125
Start: 2786231
End: 2786791
Strand: Reverse
Name: apt
Synonym: XAC2391
Alternate gene names: 21243125
Gene position: 2786791-2786231 (Counterclockwise)
Preceding gene: 21243126
Following gene: 21243123
Centisome position: 53.85
GC content: 64.53
Gene sequence:
>561_bases ATGACTGACTGCAGCCGCTGCGCCGGCACCAATACTTCCGGACCCAACCATTGGCCGGAGCGCATTCGCGACATCGTCGA TTTCCCCAAGCCGGGCATCGTCTTCAAGGACATTACTCCGTTGCTGTCCGATGGTCCGGATTTCGCCTCTGCGCTGGACG AAATGGCGCAGCCGTGGCGGACCACGCCGCTGGATGCGGTGCTGGGGATCGAGGCGCGCGGTTTCATTCTGGGGGCGGCG CTGGCGCGCGAACTGCGGACCGGCTTCGTACCGGTGCGCAAGCCGGGCAAGCTGCCGGGGCGCACGCTGATCCAGGAATA TGCGCTGGAATACGGCACCGATCGCATTGAAATGCATGAGGATGCGCTGCCGCGGGGGGCGCGCGTGCTGATTGTCGACG ACGTGCTGGCCACCGGCGGCACGCTGCGTGCGGCCTTGGGACTTGCTGCCCAACTCGAACTTGAAGTCGTTGGCGCAGCC GTGCTGGTGGAGTTGCAGGGACTGCAGGGTCGCCAGAAATGGGCGAACGATGTACCGCTGTTGGCGACGCTTTCTTACTG A
Upstream 100 bases:
>100_bases TCCTGACGCGCTCAGATGCAGGTATGCCGTAAATCCGGCGTGGATGGCGTACGCAGCCTAGAATAGGCGCAACCCCACCG GCCACCACGCCACCGCCCTC
Downstream 100 bases:
>100_bases GTCCAAGCTCTGGAAGCGACCCTGGGTGCGTGGCAGCGCCTGCCTCCAGGATTGCTCCTGCTGAACATCGGCGGCCGGCA CGACGCCGGCCGCGCTGCGT
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTDCSRCAGTNTSGPNHWPERIRDIVDFPKPGIVFKDITPLLSDGPDFASALDEMAQPWRTTPLDAVLGIEARGFILGAA LARELRTGFVPVRKPGKLPGRTLIQEYALEYGTDRIEMHEDALPRGARVLIVDDVLATGGTLRAALGLAAQLELEVVGAA VLVELQGLQGRQKWANDVPLLATLSY
Sequences:
>Translated_186_residues MTDCSRCAGTNTSGPNHWPERIRDIVDFPKPGIVFKDITPLLSDGPDFASALDEMAQPWRTTPLDAVLGIEARGFILGAA LARELRTGFVPVRKPGKLPGRTLIQEYALEYGTDRIEMHEDALPRGARVLIVDDVLATGGTLRAALGLAAQLELEVVGAA VLVELQGLQGRQKWANDVPLLATLSY >Mature_185_residues TDCSRCAGTNTSGPNHWPERIRDIVDFPKPGIVFKDITPLLSDGPDFASALDEMAQPWRTTPLDAVLGIEARGFILGAAL ARELRTGFVPVRKPGKLPGRTLIQEYALEYGTDRIEMHEDALPRGARVLIVDDVLATGGTLRAALGLAAQLELEVVGAAV LVELQGLQGRQKWANDVPLLATLSY
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family
Homologues:
Organism=Homo sapiens, GI4502171, Length=170, Percent_Identity=47.0588235294118, Blast_Score=147, Evalue=4e-36, Organism=Homo sapiens, GI71773201, Length=123, Percent_Identity=47.9674796747967, Blast_Score=115, Evalue=2e-26, Organism=Escherichia coli, GI1786675, Length=158, Percent_Identity=46.8354430379747, Blast_Score=147, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17509087, Length=170, Percent_Identity=46.4705882352941, Blast_Score=130, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6323619, Length=163, Percent_Identity=38.6503067484663, Blast_Score=108, Evalue=5e-25, Organism=Saccharomyces cerevisiae, GI6320649, Length=167, Percent_Identity=32.9341317365269, Blast_Score=75, Evalue=4e-15, Organism=Drosophila melanogaster, GI17136334, Length=165, Percent_Identity=37.5757575757576, Blast_Score=109, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APT_XANAC (Q8PJY6)
Other databases:
- EMBL: AE008923 - RefSeq: NP_642707.1 - ProteinModelPortal: Q8PJY6 - SMR: Q8PJY6 - GeneID: 1156462 - GenomeReviews: AE008923_GR - KEGG: xac:XAC2391 - NMPDR: fig|190486.1.peg.2351 - HOGENOM: HBG703830 - OMA: GILFYDI - ProtClustDB: PRK02304 - BioCyc: XAXO190486:XAC2391-MONOMER - BRENDA: 2.4.2.7 - GO: GO:0005737 - HAMAP: MF_00004 - InterPro: IPR005764 - InterPro: IPR000836 - TIGRFAMs: TIGR01090
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.7
Molecular weight: Translated: 20098; Mature: 19967
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDCSRCAGTNTSGPNHWPERIRDIVDFPKPGIVFKDITPLLSDGPDFASALDEMAQPWR CCCCCHHCCCCCCCCCHHHHHHHHHHCCCCCCEEHHHCCHHHCCCCHHHHHHHHHHCCCC TTPLDAVLGIEARGFILGAALARELRTGFVPVRKPGKLPGRTLIQEYALEYGTDRIEMHE CCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECC DALPRGARVLIVDDVLATGGTLRAALGLAAQLELEVVGAAVLVELQGLQGRQKWANDVPL CCCCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCE LATLSY EEEECC >Mature Secondary Structure TDCSRCAGTNTSGPNHWPERIRDIVDFPKPGIVFKDITPLLSDGPDFASALDEMAQPWR CCCCHHCCCCCCCCCHHHHHHHHHHCCCCCCEEHHHCCHHHCCCCHHHHHHHHHHCCCC TTPLDAVLGIEARGFILGAALARELRTGFVPVRKPGKLPGRTLIQEYALEYGTDRIEMHE CCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECC DALPRGARVLIVDDVLATGGTLRAALGLAAQLELEVVGAAVLVELQGLQGRQKWANDVPL CCCCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCE LATLSY EEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217