| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is folD
Identifier: 21243024
GI number: 21243024
Start: 2678761
End: 2679672
Strand: Reverse
Name: folD
Synonym: XAC2289
Alternate gene names: 21243024
Gene position: 2679672-2678761 (Counterclockwise)
Preceding gene: 21243026
Following gene: 21243023
Centisome position: 51.78
GC content: 67.43
Gene sequence:
>912_bases ATGACCGCTTCTGCGCCAGCTGCCTCCGCTTCGGCCCGCCTTCTCGATGGTCGCCGCATTGCCGAGGAATTGCTCGACGG ATTGAAGCTGCGGGTGGACGCGCGGGTGGCGGCCGGCAAGGCGCGCCCCGGGCTGGCGGTGGTGCTGGTCGGTGGCGATC CGGCATCGTCGGTGTATGTGCGCAACAAACGGCGCGCGGCCGAGAAGGTCGGCATCGAAGCCTTCGATTACGACCTGCCG CAGGGCACCAGCGAAGCCCAGTTGGCGTCGCTGATCGATGAGCTCAATGCCGATCCCAAGATCCACGGCATTCTGATCCA GCTGCCGCTGCCGGGCATTCCCGATGCCAACCGGCTGATTCAGCGCATCGACCCGCGCAAGGACGTGGACGGATTCCATC CGCAGAATGTCGGGCATCTGGCCTTGCGCGAATTCGGGCTGCGCCCGTGCACGCCGCGCGGCATCGTGACCTTGCTCGGC CACACCGACCAGCCGGTGCGCGGCCGCAATGCCACCATCGTGGGCGTGAGCAATCACGTTGGCCGGCCGATGGGGCTGGA GCTGTTGATCGCCGGCTGCACGGTCACCAGTTGCCACAAATTCACCCCGCCCGATGTGCTGGAAGCCAGCGTGCGCAATG CGGACATCCTGGTGGTGGCAGTCGGCCGCCCGGGGCTGATTCCGGGCGAATGGGTCAAGCCGGGCGCGGTGGTGATCGAT GTCGGCATCAACCGGCTCGATGATGGCCGCCTGGTGGGCGACGTCGGCTTCGACGCCGCCGCGCAGCGCGCGGCCTGGAT CACCCCGGTGCCGGGCGGGGTAGGGCCGATGACGGTGGCCACGCTGATGCAGAACACCATCGAGGCCGCTGATGCGGCCG GGATTCAGGATTCGGGATTCGGGATTCGTTAA
Upstream 100 bases:
>100_bases CGCTTCGATCGAAGTAGTGCTCGAATCGGTGCGTGAGGTGGTGTCGGTCATGGCGGAATCGGGGACAATAGACGGCCTTC GACTCTACACCTGACGCCCC
Downstream 100 bases:
>100_bases AGGCAACGGCGAAGTGCCTGCATCGGCTGATCCGGATCGCATCCGAGATCGGCCGGCAATCGGCAAACAGGCAAACGGTG AGCGGTGCAACGCGACGTTG
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTASAPAASASARLLDGRRIAEELLDGLKLRVDARVAAGKARPGLAVVLVGGDPASSVYVRNKRRAAEKVGIEAFDYDLP QGTSEAQLASLIDELNADPKIHGILIQLPLPGIPDANRLIQRIDPRKDVDGFHPQNVGHLALREFGLRPCTPRGIVTLLG HTDQPVRGRNATIVGVSNHVGRPMGLELLIAGCTVTSCHKFTPPDVLEASVRNADILVVAVGRPGLIPGEWVKPGAVVID VGINRLDDGRLVGDVGFDAAAQRAAWITPVPGGVGPMTVATLMQNTIEAADAAGIQDSGFGIR
Sequences:
>Translated_303_residues MTASAPAASASARLLDGRRIAEELLDGLKLRVDARVAAGKARPGLAVVLVGGDPASSVYVRNKRRAAEKVGIEAFDYDLP QGTSEAQLASLIDELNADPKIHGILIQLPLPGIPDANRLIQRIDPRKDVDGFHPQNVGHLALREFGLRPCTPRGIVTLLG HTDQPVRGRNATIVGVSNHVGRPMGLELLIAGCTVTSCHKFTPPDVLEASVRNADILVVAVGRPGLIPGEWVKPGAVVID VGINRLDDGRLVGDVGFDAAAQRAAWITPVPGGVGPMTVATLMQNTIEAADAAGIQDSGFGIR >Mature_302_residues TASAPAASASARLLDGRRIAEELLDGLKLRVDARVAAGKARPGLAVVLVGGDPASSVYVRNKRRAAEKVGIEAFDYDLPQ GTSEAQLASLIDELNADPKIHGILIQLPLPGIPDANRLIQRIDPRKDVDGFHPQNVGHLALREFGLRPCTPRGIVTLLGH TDQPVRGRNATIVGVSNHVGRPMGLELLIAGCTVTSCHKFTPPDVLEASVRNADILVVAVGRPGLIPGEWVKPGAVVIDV GINRLDDGRLVGDVGFDAAAQRAAWITPVPGGVGPMTVATLMQNTIEAADAAGIQDSGFGIR
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=292, Percent_Identity=43.8356164383562, Blast_Score=222, Evalue=4e-58, Organism=Homo sapiens, GI94721354, Length=297, Percent_Identity=43.7710437710438, Blast_Score=221, Evalue=5e-58, Organism=Homo sapiens, GI222418558, Length=293, Percent_Identity=42.320819112628, Blast_Score=218, Evalue=5e-57, Organism=Homo sapiens, GI36796743, Length=208, Percent_Identity=25.4807692307692, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1786741, Length=280, Percent_Identity=58.9285714285714, Blast_Score=332, Evalue=2e-92, Organism=Caenorhabditis elegans, GI17568735, Length=256, Percent_Identity=42.578125, Blast_Score=171, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6321643, Length=298, Percent_Identity=40.2684563758389, Blast_Score=202, Evalue=6e-53, Organism=Saccharomyces cerevisiae, GI6319558, Length=296, Percent_Identity=40.2027027027027, Blast_Score=197, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6322933, Length=288, Percent_Identity=25.6944444444444, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI17136816, Length=296, Percent_Identity=46.9594594594595, Blast_Score=242, Evalue=2e-64, Organism=Drosophila melanogaster, GI17136818, Length=292, Percent_Identity=47.2602739726027, Blast_Score=241, Evalue=3e-64, Organism=Drosophila melanogaster, GI62472483, Length=299, Percent_Identity=41.8060200668896, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI45551871, Length=299, Percent_Identity=41.8060200668896, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI24645718, Length=291, Percent_Identity=42.2680412371134, Blast_Score=207, Evalue=5e-54, Organism=Drosophila melanogaster, GI17137370, Length=291, Percent_Identity=42.2680412371134, Blast_Score=207, Evalue=5e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD_XANAC (Q8PK86)
Other databases:
- EMBL: AE008923 - RefSeq: NP_642606.1 - HSSP: P11586 - ProteinModelPortal: Q8PK86 - SMR: Q8PK86 - GeneID: 1156360 - GenomeReviews: AE008923_GR - KEGG: xac:XAC2289 - NMPDR: fig|190486.1.peg.2250 - HOGENOM: HBG328751 - OMA: DVVYETA - ProtClustDB: PRK10792 - BioCyc: XAXO190486:XAC2289-MONOMER - BRENDA: 1.5.1.5 - BRENDA: 3.5.4.9 - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 31774; Mature: 31643
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASAPAASASARLLDGRRIAEELLDGLKLRVDARVAAGKARPGLAVVLVGGDPASSVYV CCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCEEE RNKRRAAEKVGIEAFDYDLPQGTSEAQLASLIDELNADPKIHGILIQLPLPGIPDANRLI ECHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHH QRIDPRKDVDGFHPQNVGHLALREFGLRPCTPRGIVTLLGHTDQPVRGRNATIVGVSNHV HHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECHHCC GRPMGLELLIAGCTVTSCHKFTPPDVLEASVRNADILVVAVGRPGLIPGEWVKPGAVVID CCCCCEEEEEECCCEECCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEE VGINRLDDGRLVGDVGFDAAAQRAAWITPVPGGVGPMTVATLMQNTIEAADAAGIQDSGF ECCCCCCCCEEEEECCCCHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC GIR CCC >Mature Secondary Structure TASAPAASASARLLDGRRIAEELLDGLKLRVDARVAAGKARPGLAVVLVGGDPASSVYV CCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCEEE RNKRRAAEKVGIEAFDYDLPQGTSEAQLASLIDELNADPKIHGILIQLPLPGIPDANRLI ECHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHH QRIDPRKDVDGFHPQNVGHLALREFGLRPCTPRGIVTLLGHTDQPVRGRNATIVGVSNHV HHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECHHCC GRPMGLELLIAGCTVTSCHKFTPPDVLEASVRNADILVVAVGRPGLIPGEWVKPGAVVID CCCCCEEEEEECCCEECCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEE VGINRLDDGRLVGDVGFDAAAQRAAWITPVPGGVGPMTVATLMQNTIEAADAAGIQDSGF ECCCCCCCCEEEEECCCCHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC GIR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217