| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is guaB [H]
Identifier: 21243023
GI number: 21243023
Start: 2677123
End: 2678580
Strand: Reverse
Name: guaB [H]
Synonym: XAC2288
Alternate gene names: 21243023
Gene position: 2678580-2677123 (Counterclockwise)
Preceding gene: 21243024
Following gene: 21243022
Centisome position: 51.75
GC content: 63.92
Gene sequence:
>1458_bases ATGCTACGCATCCAGGCTGAAGCTCTTACCTACGACGACGTCTCGCTCGTCCCCGCTCACTCGATGGTCCTGCCCAAGGA CGTCAGTCTGGAAACCCGGCTGACGCGCGACCTGCGCCTGAAACTGCCGATTCTGTCGGCGGCGATGGACACAGTGACCG AACACCGTCTTGCGGTGGCCATGGCCCAGCTGGGCGGCATCGGCATCATCCACAAGAACCTGACCCCGCAGCAGCAAGCC GGCGAAGTGGCGCGGGTCAAGAAGTTCGAATCCGGCGTGATCACCGAGCCGTTCACCGTCAGCCCGGACACGACCATCGG CGAAGTGCTGGCACTGACGCGCGCGCGCAACATCTCCGGCGTGCCGGTGGTGGATGGCAGCGAACTGGTCGGTATCGTCA CCAGCCGCGACATGCGCTTCGAAAAGAAGCTCGACGATCCGGTCCGCCACATCATGACCAAGAAGGACCGCCTGATCACC GTGCGCGAAGGCGCCAGCGATGAGGAAGTGCTCGAGCTGCTGCATCGCAACCGGATCGAAAAGGTCTTGGTGGTGAACGA CAGCTTCGAGCTGCGCGGTCTGATCACGGTCAAGGACATCCAGAAGAAGACCGATAACCCCAATGCCGCCAAGGACAGCG CCAAACGCTTGCTGGTGGGCGCGGCGGTGGGCGTGGGCGGCGATACCGAGCAGCGCATCGAGCTGCTTGCCGCGGCCGGC GTGGACGTGGTGATTGTCGATACCGCGCATGGCCATTCGCAGGGCGTGATCGATCGCGTGGCGTGGGTCAAGAAGACCTA TCCGCAGCTGCAGGTGATCGGCGGCAACATCGTCACCGGCGATGCGGCATTGGCATTGATGGATGCCGGCGCGGACGCGG TCAAGGTTGGCGTGGGCCCGGGTTCGATCTGCACCACGCGTGTGGTTGCCGGCGTGGGCGTGCCGCAGATCACTGCGGTG GATATGGTGGCCGAGGCGCTGCAGGACCGCATTCCATTGATTGCCGATGGCGGCATCCGCTATTCCGGCGATATCGGCAA GGCGCTGGTGGCCGGTGCCTCGACGGTGATGGTCGGCGGCTTGTTGGCCGGTACCGAAGAAGCACCGGGTGAGGTCGAAC TGTTCCAGGGCCGTAGCTACAAGAGCTACCGCGGCATGGGTAGCCTGGGTGCGATGGAGAAAGGGTCCAAGGACCGCTAT TTCCAGGATGCTTCCGATGCCGACAAGCTGGTTCCCGAAGGCATCGAGGGCCGCGTGCCGTATCGCGGGCCGGTCGGCGG CATCATCCATCAGCTCATCGGTGGCCTGCGTGCGACCATGGGGTATGTGGGCTGCGCCACCATCGAAGAAATGCGCAGCA AGCCCAAGTTCGTCAAGATCACCGGCGCCGGTCAGCGCGAAAGCCACGTCCACGACGTGCAGATCACCAAAGAGCCGCCG AACTATCGCGCCGGGTAA
Upstream 100 bases:
>100_bases AGCGGTGCAACGCGACGTTGTTGCGAATCCCGAATCACGGCTCCCCAATCCCGGCCCCAATGCGTTAAAATGCCGCGCTT CCCCAAACTCGGGTCCGCCG
Downstream 100 bases:
>100_bases CCGGGAATGGGGAATCGGGAATCGTAAGAGCCCGCCGCTTCCTCGTCCGATAGCGGCCGGCGCCGCGTTTGCTGTTGCGA TTCCCTCATCCCGATTCTCG
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MLRIQAEALTYDDVSLVPAHSMVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVAMAQLGGIGIIHKNLTPQQQA GEVARVKKFESGVITEPFTVSPDTTIGEVLALTRARNISGVPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLIT VREGASDEEVLELLHRNRIEKVLVVNDSFELRGLITVKDIQKKTDNPNAAKDSAKRLLVGAAVGVGGDTEQRIELLAAAG VDVVIVDTAHGHSQGVIDRVAWVKKTYPQLQVIGGNIVTGDAALALMDAGADAVKVGVGPGSICTTRVVAGVGVPQITAV DMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGGLLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRY FQDASDADKLVPEGIEGRVPYRGPVGGIIHQLIGGLRATMGYVGCATIEEMRSKPKFVKITGAGQRESHVHDVQITKEPP NYRAG
Sequences:
>Translated_485_residues MLRIQAEALTYDDVSLVPAHSMVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVAMAQLGGIGIIHKNLTPQQQA GEVARVKKFESGVITEPFTVSPDTTIGEVLALTRARNISGVPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLIT VREGASDEEVLELLHRNRIEKVLVVNDSFELRGLITVKDIQKKTDNPNAAKDSAKRLLVGAAVGVGGDTEQRIELLAAAG VDVVIVDTAHGHSQGVIDRVAWVKKTYPQLQVIGGNIVTGDAALALMDAGADAVKVGVGPGSICTTRVVAGVGVPQITAV DMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGGLLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRY FQDASDADKLVPEGIEGRVPYRGPVGGIIHQLIGGLRATMGYVGCATIEEMRSKPKFVKITGAGQRESHVHDVQITKEPP NYRAG >Mature_485_residues MLRIQAEALTYDDVSLVPAHSMVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVAMAQLGGIGIIHKNLTPQQQA GEVARVKKFESGVITEPFTVSPDTTIGEVLALTRARNISGVPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLIT VREGASDEEVLELLHRNRIEKVLVVNDSFELRGLITVKDIQKKTDNPNAAKDSAKRLLVGAAVGVGGDTEQRIELLAAAG VDVVIVDTAHGHSQGVIDRVAWVKKTYPQLQVIGGNIVTGDAALALMDAGADAVKVGVGPGSICTTRVVAGVGVPQITAV DMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGGLLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRY FQDASDADKLVPEGIEGRVPYRGPVGGIIHQLIGGLRATMGYVGCATIEEMRSKPKFVKITGAGQRESHVHDVQITKEPP NYRAG
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=485, Percent_Identity=44.7422680412371, Blast_Score=367, Evalue=1e-101, Organism=Homo sapiens, GI34328928, Length=485, Percent_Identity=44.7422680412371, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI156616279, Length=485, Percent_Identity=44.7422680412371, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI34328930, Length=485, Percent_Identity=44.7422680412371, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI66933016, Length=483, Percent_Identity=43.4782608695652, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI217035152, Length=474, Percent_Identity=44.7257383966245, Blast_Score=356, Evalue=3e-98, Organism=Homo sapiens, GI217035148, Length=485, Percent_Identity=44.1237113402062, Blast_Score=355, Evalue=6e-98, Organism=Homo sapiens, GI217035150, Length=485, Percent_Identity=41.6494845360825, Blast_Score=322, Evalue=6e-88, Organism=Homo sapiens, GI50541954, Length=246, Percent_Identity=39.0243902439024, Blast_Score=162, Evalue=8e-40, Organism=Homo sapiens, GI50541952, Length=246, Percent_Identity=39.0243902439024, Blast_Score=162, Evalue=8e-40, Organism=Homo sapiens, GI50541948, Length=246, Percent_Identity=39.0243902439024, Blast_Score=162, Evalue=8e-40, Organism=Homo sapiens, GI50541956, Length=246, Percent_Identity=39.0243902439024, Blast_Score=162, Evalue=9e-40, Organism=Homo sapiens, GI156104880, Length=261, Percent_Identity=36.7816091954023, Blast_Score=159, Evalue=4e-39, Organism=Escherichia coli, GI1788855, Length=487, Percent_Identity=63.2443531827515, Blast_Score=572, Evalue=1e-164, Organism=Escherichia coli, GI1786293, Length=267, Percent_Identity=34.4569288389513, Blast_Score=150, Evalue=2e-37, Organism=Caenorhabditis elegans, GI71994385, Length=499, Percent_Identity=39.6793587174349, Blast_Score=309, Evalue=2e-84, Organism=Caenorhabditis elegans, GI71994389, Length=421, Percent_Identity=42.0427553444181, Blast_Score=291, Evalue=4e-79, Organism=Caenorhabditis elegans, GI17560440, Length=255, Percent_Identity=33.7254901960784, Blast_Score=159, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6323585, Length=487, Percent_Identity=40.041067761807, Blast_Score=335, Evalue=8e-93, Organism=Saccharomyces cerevisiae, GI6322012, Length=483, Percent_Identity=40.1656314699793, Blast_Score=335, Evalue=8e-93, Organism=Saccharomyces cerevisiae, GI6323464, Length=483, Percent_Identity=40.3726708074534, Blast_Score=323, Evalue=5e-89, Organism=Saccharomyces cerevisiae, GI6319352, Length=338, Percent_Identity=40.2366863905325, Blast_Score=244, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6319353, Length=141, Percent_Identity=36.8794326241135, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24641071, Length=481, Percent_Identity=42.2037422037422, Blast_Score=347, Evalue=1e-95, Organism=Drosophila melanogaster, GI24641073, Length=481, Percent_Identity=42.2037422037422, Blast_Score=347, Evalue=1e-95, Organism=Drosophila melanogaster, GI28571163, Length=439, Percent_Identity=43.0523917995444, Blast_Score=317, Evalue=1e-86,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51691; Mature: 51691
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIQAEALTYDDVSLVPAHSMVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVA CEEEEEEEEEECCCEECCCCCEECCCCCCHHHHHCCCCEEECHHHHHHHHHHHHHHHHHH MAQLGGIGIIHKNLTPQQQAGEVARVKKFESGVITEPFTVSPDTTIGEVLALTRARNISG HHHHCCEEEEECCCCCHHHHCHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHCCCCC VPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLITVREGASDEEVLELLHRNRIE CEEECCCCEEEEEECCCCHHHHHCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCC KVLVVNDSFELRGLITVKDIQKKTDNPNAAKDSAKRLLVGAAVGVGGDTEQRIELLAAAG EEEEECCCEEEEEEEEEHHHHHHCCCCCHHHHHHHHEEEEEEECCCCCHHHHHHHHHHCC VDVVIVDTAHGHSQGVIDRVAWVKKTYPQLQVIGGNIVTGDAALALMDAGADAVKVGVGP CCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCEEEECCCEEEEEECCCCEEEEECCC GSICTTRVVAGVGVPQITAVDMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGG CCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCEEECCCHHHHHHHCCHHHHHHH LLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRYFQDASDADKLVPEGIEGRVP EEECCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC YRGPVGGIIHQLIGGLRATMGYVGCATIEEMRSKPKFVKITGAGQRESHVHDVQITKEPP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCC NYRAG CCCCC >Mature Secondary Structure MLRIQAEALTYDDVSLVPAHSMVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVA CEEEEEEEEEECCCEECCCCCEECCCCCCHHHHHCCCCEEECHHHHHHHHHHHHHHHHHH MAQLGGIGIIHKNLTPQQQAGEVARVKKFESGVITEPFTVSPDTTIGEVLALTRARNISG HHHHCCEEEEECCCCCHHHHCHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHCCCCC VPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLITVREGASDEEVLELLHRNRIE CEEECCCCEEEEEECCCCHHHHHCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCC KVLVVNDSFELRGLITVKDIQKKTDNPNAAKDSAKRLLVGAAVGVGGDTEQRIELLAAAG EEEEECCCEEEEEEEEEHHHHHHCCCCCHHHHHHHHEEEEEEECCCCCHHHHHHHHHHCC VDVVIVDTAHGHSQGVIDRVAWVKKTYPQLQVIGGNIVTGDAALALMDAGADAVKVGVGP CCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCEEEECCCEEEEEECCCCEEEEECCC GSICTTRVVAGVGVPQITAVDMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGG CCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCEEECCCHHHHHHHCCHHHHHHH LLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRYFQDASDADKLVPEGIEGRVP EEECCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC YRGPVGGIIHQLIGGLRATMGYVGCATIEEMRSKPKFVKITGAGQRESHVHDVQITKEPP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCC NYRAG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA