| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243013
Identifier: 21243013
GI number: 21243013
Start: 2665676
End: 2666623
Strand: Direct
Name: 21243013
Synonym: XAC2278
Alternate gene names: NA
Gene position: 2665676-2666623 (Clockwise)
Preceding gene: 21243012
Following gene: 21243014
Centisome position: 51.51
GC content: 66.46
Gene sequence:
>948_bases ATGAAACGAAGAATCATCGCATCGCTCATCGCCACCCTGCCCTTGCTGGCATCGGCGTTTCCGGACCGGCCGATCCGGCT GGTCGTGCCGCTGCCCGCGGGCAGCATCACGGACGTGGTGGCGCGCACGCTCGCGGAGAGCATGGCGAACCGCCTCAAGC AACCCATCGTCGTGGACAACCAGGCCGGTGGGAATGCCATCCCGGGCACGATGGCCGCGGTGCGGGCGACCCCCGATGGC TACACCTTGCTGATGGTCGGCGTCACCAACGGAGCAAGCAACCTCGCCACCGTGAAATCCCTGCCCTACGATCCCCGCAA GGATTTCGCGCCGGTGGGACAGATCGCCGAAGCACCGTTCATGCTGGTGTCCCGCAAATCCTTGCCCTTGACCCAGCTGA AGGATCTGATCGCCTACGGCAAGGCGCATCCCGACAAACTCTCCTACGGCAACGGGTCCGGCAGCATCCAGTTGTCCGCG GCACGGATGGTTTCCCAGGCGGGATTCACCGCGACCGCCGTGCCCTACAAAGGCGTGCCGCAGGCGATGACCGACCTCAT CGGCGACACCATCGACTTTGCCGTCGTCGATCTGGTCAACGGACTGCAAGCCGCGCGCACGGGGCGTGTGGCGGCGCTGG GCGTCACCTCGGCCCATCGCACCCCGCTCGCGCCCGACCTCCCCACCCTCGCAGAGCAAGGTCTACGGGGGTACGACATT TCCGTGTGGTTCGGCATGGTGGCGCCAGCCAATACGCCTGCCGCCGTGATCGCGAAGGTCAACGCGGCACTGCGTGAAGC GCTTGCGGATCCGGCGATCAAGCAGCGCTTCGACCAGGCGGGGCTGACGCCCTCGCCGTCGTCGCCCGAGGCCTTCAGTC GGCTCATCGACAGCGACATCGCCAAGTGGACGACGATCGCTCGGGATGCCGGTATCGCGCCGCAATGA
Upstream 100 bases:
>100_bases CGCCGTGTTCGGAGCCGCGGCGCACTGATCGAGCACCCGCCGGCCGCTTTGCACTGCCGGCGGCGACAGCACAACAACCA ACGACACCCGAGGAGAAACC
Downstream 100 bases:
>100_bases GTGGGGAGCACCCCCATGCTCAAGATCCGCAAGATCCTTCTCTCCATCGAACGCATCCACCATGAAGGCGGCCCGGCGCG CGCCATCCCCGTCACGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MKRRIIASLIATLPLLASAFPDRPIRLVVPLPAGSITDVVARTLAESMANRLKQPIVVDNQAGGNAIPGTMAAVRATPDG YTLLMVGVTNGASNLATVKSLPYDPRKDFAPVGQIAEAPFMLVSRKSLPLTQLKDLIAYGKAHPDKLSYGNGSGSIQLSA ARMVSQAGFTATAVPYKGVPQAMTDLIGDTIDFAVVDLVNGLQAARTGRVAALGVTSAHRTPLAPDLPTLAEQGLRGYDI SVWFGMVAPANTPAAVIAKVNAALREALADPAIKQRFDQAGLTPSPSSPEAFSRLIDSDIAKWTTIARDAGIAPQ
Sequences:
>Translated_315_residues MKRRIIASLIATLPLLASAFPDRPIRLVVPLPAGSITDVVARTLAESMANRLKQPIVVDNQAGGNAIPGTMAAVRATPDG YTLLMVGVTNGASNLATVKSLPYDPRKDFAPVGQIAEAPFMLVSRKSLPLTQLKDLIAYGKAHPDKLSYGNGSGSIQLSA ARMVSQAGFTATAVPYKGVPQAMTDLIGDTIDFAVVDLVNGLQAARTGRVAALGVTSAHRTPLAPDLPTLAEQGLRGYDI SVWFGMVAPANTPAAVIAKVNAALREALADPAIKQRFDQAGLTPSPSSPEAFSRLIDSDIAKWTTIARDAGIAPQ >Mature_315_residues MKRRIIASLIATLPLLASAFPDRPIRLVVPLPAGSITDVVARTLAESMANRLKQPIVVDNQAGGNAIPGTMAAVRATPDG YTLLMVGVTNGASNLATVKSLPYDPRKDFAPVGQIAEAPFMLVSRKSLPLTQLKDLIAYGKAHPDKLSYGNGSGSIQLSA ARMVSQAGFTATAVPYKGVPQAMTDLIGDTIDFAVVDLVNGLQAARTGRVAALGVTSAHRTPLAPDLPTLAEQGLRGYDI SVWFGMVAPANTPAAVIAKVNAALREALADPAIKQRFDQAGLTPSPSSPEAFSRLIDSDIAKWTTIARDAGIAPQ
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 32910; Mature: 32910
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRIIASLIATLPLLASAFPDRPIRLVVPLPAGSITDVVARTLAESMANRLKQPIVVDN CCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEC QAGGNAIPGTMAAVRATPDGYTLLMVGVTNGASNLATVKSLPYDPRKDFAPVGQIAEAPF CCCCCCCCCCHHEEEECCCCEEEEEEEECCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCE MLVSRKSLPLTQLKDLIAYGKAHPDKLSYGNGSGSIQLSAARMVSQAGFTATAVPYKGVP EEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCEEECCCCCCCH QAMTDLIGDTIDFAVVDLVNGLQAARTGRVAALGVTSAHRTPLAPDLPTLAEQGLRGYDI HHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCEE SVWFGMVAPANTPAAVIAKVNAALREALADPAIKQRFDQAGLTPSPSSPEAFSRLIDSDI EEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH AKWTTIARDAGIAPQ HHHHHHHHCCCCCCC >Mature Secondary Structure MKRRIIASLIATLPLLASAFPDRPIRLVVPLPAGSITDVVARTLAESMANRLKQPIVVDN CCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEC QAGGNAIPGTMAAVRATPDGYTLLMVGVTNGASNLATVKSLPYDPRKDFAPVGQIAEAPF CCCCCCCCCCHHEEEECCCCEEEEEEEECCCCCCHHHHHCCCCCCCCCCCCHHHHHHCCE MLVSRKSLPLTQLKDLIAYGKAHPDKLSYGNGSGSIQLSAARMVSQAGFTATAVPYKGVP EEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCEEECCCCCCCH QAMTDLIGDTIDFAVVDLVNGLQAARTGRVAALGVTSAHRTPLAPDLPTLAEQGLRGYDI HHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCEE SVWFGMVAPANTPAAVIAKVNAALREALADPAIKQRFDQAGLTPSPSSPEAFSRLIDSDI EEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH AKWTTIARDAGIAPQ HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]