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The map label for this gene is ycaK [C]

Identifier: 21242964

GI number: 21242964

Start: 2612430

End: 2613026

Strand: Reverse

Name: ycaK [C]

Synonym: XAC2229

Alternate gene names: 21242964

Gene position: 2613026-2612430 (Counterclockwise)

Preceding gene: 21242965

Following gene: 21242963

Centisome position: 50.49

GC content: 63.48

Gene sequence:

>597_bases
ATGCATGCACTGATCGTCGTATCGCATCCCGAACCGGGATCACTCACCCATCGAGTCGCCGCCGAGATCGCCAAGAGCAT
CGCGGACGCCGGCGCTGCACACACCTTCGAAGTCGCAGACCTGGCTGCCGAAGGCTTTGATCCGCGCTACAACCCGGCCG
ACCTCGCACTGTTTCGAAACCAGGGGCAGCCCCCCGCCGACGTGCTGGCAGAGCAGACACGGATCGAACGCGCCGATGCG
TTGGTGCTGGTCTTTCCGGTGTATTGGTGGTCCTTCCCCGCCACGCTCAAGGGATGGATCGACCGGGTGTTCACCGGCGG
CTGGGCCTACAGCGAAACGAGCGGCGGCCTGCTGAAACGCCTACCGGTGCACTTGGTCGCCATCGGTGCCTCTGGCAAAC
CTACCTACGACAAGCATGGCTATGCCACGGCGATGAAGACGCAGATCGAGCACGGCATCTTCGGCTACTGTGGCGCACGC
GTGGTGTCCTCCCACTTGCTGACCGAAGCCGACGAGGGTTTTCCTCAGACGCATTTCGATACGGCCCGCCGCGTCGGACG
CGAGCTTCCCGAACAGACGGACCAGCAAGCACCATGA

Upstream 100 bases:

>100_bases
CCCCAGAAGCGGCGTGGCCTGCGCCGCTTGAGCGTCCTGCCGATGCCTCACATGAATCGAATCAAGAATCGCCATTCGCT
TTGCTGAAAGGAAAAACACC

Downstream 100 bases:

>100_bases
GTCCTGAAACCGGCCCACGCAAGCGTCTGACGAAGGAGCAGCGGCTGGCGCAATTACTGGATGTAGCGAGACAGCTGGCC
CACCAGGAAGGCACGGATGC

Product: NAD(P)H dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MHALIVVSHPEPGSLTHRVAAEIAKSIADAGAAHTFEVADLAAEGFDPRYNPADLALFRNQGQPPADVLAEQTRIERADA
LVLVFPVYWWSFPATLKGWIDRVFTGGWAYSETSGGLLKRLPVHLVAIGASGKPTYDKHGYATAMKTQIEHGIFGYCGAR
VVSSHLLTEADEGFPQTHFDTARRVGRELPEQTDQQAP

Sequences:

>Translated_198_residues
MHALIVVSHPEPGSLTHRVAAEIAKSIADAGAAHTFEVADLAAEGFDPRYNPADLALFRNQGQPPADVLAEQTRIERADA
LVLVFPVYWWSFPATLKGWIDRVFTGGWAYSETSGGLLKRLPVHLVAIGASGKPTYDKHGYATAMKTQIEHGIFGYCGAR
VVSSHLLTEADEGFPQTHFDTARRVGRELPEQTDQQAP
>Mature_198_residues
MHALIVVSHPEPGSLTHRVAAEIAKSIADAGAAHTFEVADLAAEGFDPRYNPADLALFRNQGQPPADVLAEQTRIERADA
LVLVFPVYWWSFPATLKGWIDRVFTGGWAYSETSGGLLKRLPVHLVAIGASGKPTYDKHGYATAMKTQIEHGIFGYCGAR
VVSSHLLTEADEGFPQTHFDTARRVGRELPEQTDQQAP

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Homo sapiens, GI156564357, Length=187, Percent_Identity=28.3422459893048, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI4505415, Length=188, Percent_Identity=29.7872340425532, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI70995396, Length=182, Percent_Identity=28.021978021978, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI1787129, Length=157, Percent_Identity=31.2101910828025, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 21575; Mature: 21575

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHALIVVSHPEPGSLTHRVAAEIAKSIADAGAAHTFEVADLAAEGFDPRYNPADLALFRN
CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHC
QGQPPADVLAEQTRIERADALVLVFPVYWWSFPATLKGWIDRVFTGGWAYSETSGGLLKR
CCCCHHHHHHHHHHHHHHCEEEEEEHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHH
LPVHLVAIGASGKPTYDKHGYATAMKTQIEHGIFGYCGARVVSSHLLTEADEGFPQTHFD
CCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
TARRVGRELPEQTDQQAP
HHHHHHHHCHHHCCCCCC
>Mature Secondary Structure
MHALIVVSHPEPGSLTHRVAAEIAKSIADAGAAHTFEVADLAAEGFDPRYNPADLALFRN
CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHC
QGQPPADVLAEQTRIERADALVLVFPVYWWSFPATLKGWIDRVFTGGWAYSETSGGLLKR
CCCCHHHHHHHHHHHHHHCEEEEEEHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHH
LPVHLVAIGASGKPTYDKHGYATAMKTQIEHGIFGYCGARVVSSHLLTEADEGFPQTHFD
CCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
TARRVGRELPEQTDQQAP
HHHHHHHHCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]