| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is acrR [C]
Identifier: 21242963
GI number: 21242963
Start: 2611822
End: 2612433
Strand: Reverse
Name: acrR [C]
Synonym: XAC2228
Alternate gene names: 21242963
Gene position: 2612433-2611822 (Counterclockwise)
Preceding gene: 21242964
Following gene: 77748639
Centisome position: 50.48
GC content: 65.03
Gene sequence:
>612_bases ATGAGTCCTGAAACCGGCCCACGCAAGCGTCTGACGAAGGAGCAGCGGCTGGCGCAATTACTGGATGTAGCGAGACAGCT GGCCCACCAGGAAGGCACGGATGCACTGAGCCTGGGTCGGCTGGCCGAGGCGGCCGGCATCACCAAGCCCACGGTCTATG ACCATTTCGGCACGCGGCAGGGGCTGCTGGCCGCGCTGTATCGGGATTTCGACTTGCGCCAACGGCAGGTCATCGACGCG GCTATTGCCGCCAGTAAACCCCGTCTGGAAGACAAGGCCTGCGTACTGGCACGGAGCTACATCGACTGCGTGCTGGCCGA AGGCCGGGAAATCCCGGGCGTGCTGGCCGCTTTGGACGGTTCGCCAGAGTTGGCGGTGCTCAAGCGGCAATGCCAGCAGG ACTTCCTGGAAAAGTGCCGGACGGCGCTGGCACCAGTCGCCGGCCCCAAGGGGCTGCCGCTGGCAGGCTTGTGGGCCATG CTCGGCGCGGCCGATACACTCTCGGCCGCGGCCGTGTCCGGCGAGATCACGCACCACCAAGCCTGCGACGAGTTGTACGA GGTCATTCTCTCTCTGGTACAGCGCAGCAAGCGGCCATCAAAACCTAGCTGA
Upstream 100 bases:
>100_bases ACTTGCTGACCGAAGCCGACGAGGGTTTTCCTCAGACGCATTTCGATACGGCCCGCCGCGTCGGACGCGAGCTTCCCGAA CAGACGGACCAGCAAGCACC
Downstream 100 bases:
>100_bases GTTGATTGCAGTGACTAGAAAGAATGCCACCCTGATTGGTCTGATGGCCGTGCTACTGTGGAGCGCTGTCGTCGGCCTGA TCCGCAGTGTAAGCCAACAC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Regulatory Protein; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MSPETGPRKRLTKEQRLAQLLDVARQLAHQEGTDALSLGRLAEAAGITKPTVYDHFGTRQGLLAALYRDFDLRQRQVIDA AIAASKPRLEDKACVLARSYIDCVLAEGREIPGVLAALDGSPELAVLKRQCQQDFLEKCRTALAPVAGPKGLPLAGLWAM LGAADTLSAAAVSGEITHHQACDELYEVILSLVQRSKRPSKPS
Sequences:
>Translated_203_residues MSPETGPRKRLTKEQRLAQLLDVARQLAHQEGTDALSLGRLAEAAGITKPTVYDHFGTRQGLLAALYRDFDLRQRQVIDA AIAASKPRLEDKACVLARSYIDCVLAEGREIPGVLAALDGSPELAVLKRQCQQDFLEKCRTALAPVAGPKGLPLAGLWAM LGAADTLSAAAVSGEITHHQACDELYEVILSLVQRSKRPSKPS >Mature_202_residues SPETGPRKRLTKEQRLAQLLDVARQLAHQEGTDALSLGRLAEAAGITKPTVYDHFGTRQGLLAALYRDFDLRQRQVIDAA IAASKPRLEDKACVLARSYIDCVLAEGREIPGVLAALDGSPELAVLKRQCQQDFLEKCRTALAPVAGPKGLPLAGLWAML GAADTLSAAAVSGEITHHQACDELYEVILSLVQRSKRPSKPS
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21905; Mature: 21774
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPETGPRKRLTKEQRLAQLLDVARQLAHQEGTDALSLGRLAEAAGITKPTVYDHFGTRQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHCCCHH GLLAALYRDFDLRQRQVIDAAIAASKPRLEDKACVLARSYIDCVLAEGREIPGVLAALDG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHEECCC SPELAVLKRQCQQDFLEKCRTALAPVAGPKGLPLAGLWAMLGAADTLSAAAVSGEITHHQ CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH ACDELYEVILSLVQRSKRPSKPS HHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SPETGPRKRLTKEQRLAQLLDVARQLAHQEGTDALSLGRLAEAAGITKPTVYDHFGTRQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHCCCHH GLLAALYRDFDLRQRQVIDAAIAASKPRLEDKACVLARSYIDCVLAEGREIPGVLAALDG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHEECCC SPELAVLKRQCQQDFLEKCRTALAPVAGPKGLPLAGLWAMLGAADTLSAAAVSGEITHHQ CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH ACDELYEVILSLVQRSKRPSKPS HHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA