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The map label for this gene is rhtA [H]

Identifier: 21242961

GI number: 21242961

Start: 2610025

End: 2610762

Strand: Direct

Name: rhtA [H]

Synonym: XAC2226

Alternate gene names: 21242961

Gene position: 2610025-2610762 (Clockwise)

Preceding gene: 21242960

Following gene: 21242970

Centisome position: 50.43

GC content: 57.45

Gene sequence:

>738_bases
ATGACCGCCTTGCGCATTGGTATCGCTGCATGCCTTCTGATCGTTATGAGGCGGGCTTGGAGGCGAATGCCCACAGGCAG
GCATCTGCCTGTGCTCCTCGTCTATGGCAGCATGCTCGGGCTGATGAACGTTCTGATCTACCAGGCGTTCTCACGAATCC
CCATTGGCATCGCTATCGCTATTGAGGTCCTGGGACCTCTGTCTGTGGTGCTTTGCGGTGCTAGGCGTCCGCTGGATCTG
GCGTGGCTTGTGGCGGCTGGTCTTGGCCTGTGGCTGCTGTTGCCCATCAGCACCAACTCGGTTTCGCTGGACCCTGTCGG
CATCGCTTTTGCCGCGGGTGCTGCTGGCGCCTGGGCGCTATATGTTGTGTACGGCAAGCAAGTTGCCCGCTTTCCCGAGA
TGGATGCCGTTGCATGGGGAATGGCTTTGGCTGCTGCCATCACCGTTCCGCTCGGCGCATGGTCGGCCGGTTCCATGCTG
CTAGTCCCATCAGTTCTTGCAATCGGACTGGTCGTGGCAGTCTTATCCAGCGCGGTGCCTTACACCTTGGAAATGTGGGC
TTTGCGTCGGCTCTCAACAAGTCTGTTTGGTGTATTGCTCGGCTCGTCTCCTGCCGTTGCTGCTCTTGCGGGTTACATCA
TATTGGGTGAGACATTGTCCAGTGTGCAATGGATGGCAATTGCGTCAATCTCGATTGCCGTCATGGGCAGCACATTAACT
ACAGGCGAAAGAGATTAG

Upstream 100 bases:

>100_bases
GCCTTGGACCGGGGTCGCTGCTGTCCTGGTATCACTGATAGTCCAGAATATTGGTGCGGCTTTTGCCAAGCAGCTTTTTT
CGACCGTCGGTGCGGCGGGC

Downstream 100 bases:

>100_bases
CTTTGTCTCAGAGGCACTACGGCATTGGGCTCTGACCGATCTCGCAAAAGGTACTTGTATTGCCCGCGATCGAGGGATTT
CGGAAGGTCACAGCAACTCG

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MTALRIGIAACLLIVMRRAWRRMPTGRHLPVLLVYGSMLGLMNVLIYQAFSRIPIGIAIAIEVLGPLSVVLCGARRPLDL
AWLVAAGLGLWLLLPISTNSVSLDPVGIAFAAGAAGAWALYVVYGKQVARFPEMDAVAWGMALAAAITVPLGAWSAGSML
LVPSVLAIGLVVAVLSSAVPYTLEMWALRRLSTSLFGVLLGSSPAVAALAGYIILGETLSSVQWMAIASISIAVMGSTLT
TGERD

Sequences:

>Translated_245_residues
MTALRIGIAACLLIVMRRAWRRMPTGRHLPVLLVYGSMLGLMNVLIYQAFSRIPIGIAIAIEVLGPLSVVLCGARRPLDL
AWLVAAGLGLWLLLPISTNSVSLDPVGIAFAAGAAGAWALYVVYGKQVARFPEMDAVAWGMALAAAITVPLGAWSAGSML
LVPSVLAIGLVVAVLSSAVPYTLEMWALRRLSTSLFGVLLGSSPAVAALAGYIILGETLSSVQWMAIASISIAVMGSTLT
TGERD
>Mature_244_residues
TALRIGIAACLLIVMRRAWRRMPTGRHLPVLLVYGSMLGLMNVLIYQAFSRIPIGIAIAIEVLGPLSVVLCGARRPLDLA
WLVAAGLGLWLLLPISTNSVSLDPVGIAFAAGAAGAWALYVVYGKQVARFPEMDAVAWGMALAAAITVPLGAWSAGSMLL
VPSVLAIGLVVAVLSSAVPYTLEMWALRRLSTSLFGVLLGSSPAVAALAGYIILGETLSSVQWMAIASISIAVMGSTLTT
GERD

Specific function: Unknown

COG id: COG5006

COG function: function code R; Predicted permease, DMT superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1787033, Length=246, Percent_Identity=45.5284552845528, Blast_Score=187, Evalue=4e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 25599; Mature: 25468

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALRIGIAACLLIVMRRAWRRMPTGRHLPVLLVYGSMLGLMNVLIYQAFSRIPIGIAIA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IEVLGPLSVVLCGARRPLDLAWLVAAGLGLWLLLPISTNSVSLDPVGIAFAAGAAGAWAL
HHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEECCCCEEECCCHHHHHCCCCCHHHH
YVVYGKQVARFPEMDAVAWGMALAAAITVPLGAWSAGSMLLVPSVLAIGLVVAVLSSAVP
HEEHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
YTLEMWALRRLSTSLFGVLLGSSPAVAALAGYIILGETLSSVQWMAIASISIAVMGSTLT
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
TGERD
CCCCC
>Mature Secondary Structure 
TALRIGIAACLLIVMRRAWRRMPTGRHLPVLLVYGSMLGLMNVLIYQAFSRIPIGIAIA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IEVLGPLSVVLCGARRPLDLAWLVAAGLGLWLLLPISTNSVSLDPVGIAFAAGAAGAWAL
HHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEECCCCEEECCCHHHHHCCCCCHHHH
YVVYGKQVARFPEMDAVAWGMALAAAITVPLGAWSAGSMLLVPSVLAIGLVVAVLSSAVP
HEEHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
YTLEMWALRRLSTSLFGVLLGSSPAVAALAGYIILGETLSSVQWMAIASISIAVMGSTLT
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
TGERD
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]