| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yhcG [H]
Identifier: 21242958
GI number: 21242958
Start: 2607846
End: 2608607
Strand: Direct
Name: yhcG [H]
Synonym: XAC2223
Alternate gene names: 21242958
Gene position: 2607846-2608607 (Clockwise)
Preceding gene: 21242957
Following gene: 21242959
Centisome position: 50.39
GC content: 61.29
Gene sequence:
>762_bases ATGCCTACGGCGGCGGGGAAAAGCGCCGCCTTACCGGCTGGCTATGCCGGCATCCACGGCGGCATCGTGGAACTGCTGGA TGCGGCGCGCCAGGCAGCGGCGCGCAGTGTCAATGCGCTGATGACGGCCAGCTATTGGGAGATTGGCCGCCGGATCGTCG AAGCCGAGCAGAAAGGCAGGCGACGGGCCGGTTACGGTGAACAGTTGATGGAGCGGCTGTCCGCCGATCTGACGGCCCGG TTCGGGCGTGGGTTCGGCGTCAACAACCTGGAGAGCATGCGACGTTTCTACCTCTCATACTCCCAGCCCGAGATTTCCCA GACAGTGTCTGGGAAATTGGGAAATGAGTCGCCTACCGAGAAATCCCAGACAGTGTCTCGGAAATTCGACCTCTCCGAAC TGGCCCAGGTCTTCACCCTGCCGTGGTCGGCCTATGTTCGGCTGCTCTCGGTCAAGGATGACCATGCCCGCCAGTTCTAC GAGACCGAGGCGCTGCGCGGCGGCTGGAGCGTGCGCCAGCTCGACCGGCAGATTGGAAGTCAGTTCTACGAGCGCACGGC CTTGTCCAAGGACAAGGCCACGATGCTGGTCAAGGGTTCGGTGGCCAAGCCCGAGGATGCGGTCACACCCAGTGATGCGA TCAAAGACCCGTATGTGCTGGAGTTCCTCGACCTCAAGGACGAGTATTCAGAGTCTGATCTGGAAGCGGCCTTGATTCAG CGACTGGAAGATTTCCTGCTGGAACTTGGGGAAGGCTTCTGA
Upstream 100 bases:
>100_bases AGGACAAGCCGGTGCGGGATGCGGCCGAACTGGTGGCGAATCGGCGGCTGGCAATCACCGGGGCTTCCCGCTCTATGGAG GCAACAGCATGAAAAGGAAG
Downstream 100 bases:
>100_bases TACGCCCAGGATTTCCTAGACATCTCAAGGCCATGGAAAATGGCTGATTCGGAGGTGTCCATGAGCAGTAAGCGGTATAC GGATGAGTTCAAGATCGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MPTAAGKSAALPAGYAGIHGGIVELLDAARQAAARSVNALMTASYWEIGRRIVEAEQKGRRRAGYGEQLMERLSADLTAR FGRGFGVNNLESMRRFYLSYSQPEISQTVSGKLGNESPTEKSQTVSRKFDLSELAQVFTLPWSAYVRLLSVKDDHARQFY ETEALRGGWSVRQLDRQIGSQFYERTALSKDKATMLVKGSVAKPEDAVTPSDAIKDPYVLEFLDLKDEYSESDLEAALIQ RLEDFLLELGEGF
Sequences:
>Translated_253_residues MPTAAGKSAALPAGYAGIHGGIVELLDAARQAAARSVNALMTASYWEIGRRIVEAEQKGRRRAGYGEQLMERLSADLTAR FGRGFGVNNLESMRRFYLSYSQPEISQTVSGKLGNESPTEKSQTVSRKFDLSELAQVFTLPWSAYVRLLSVKDDHARQFY ETEALRGGWSVRQLDRQIGSQFYERTALSKDKATMLVKGSVAKPEDAVTPSDAIKDPYVLEFLDLKDEYSESDLEAALIQ RLEDFLLELGEGF >Mature_252_residues PTAAGKSAALPAGYAGIHGGIVELLDAARQAAARSVNALMTASYWEIGRRIVEAEQKGRRRAGYGEQLMERLSADLTARF GRGFGVNNLESMRRFYLSYSQPEISQTVSGKLGNESPTEKSQTVSRKFDLSELAQVFTLPWSAYVRLLSVKDDHARQFYE TEALRGGWSVRQLDRQIGSQFYERTALSKDKATMLVKGSVAKPEDAVTPSDAIKDPYVLEFLDLKDEYSESDLEAALIQR LEDFLLELGEGF
Specific function: Unknown
COG id: COG4804
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789614, Length=246, Percent_Identity=57.7235772357724, Blast_Score=267, Evalue=6e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009362 [H]
Pfam domain/function: PF06250 DUF1016 [H]
EC number: NA
Molecular weight: Translated: 28116; Mature: 27985
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTAAGKSAALPAGYAGIHGGIVELLDAARQAAARSVNALMTASYWEIGRRIVEAEQKGR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RRAGYGEQLMERLSADLTARFGRGFGVNNLESMRRFYLSYSQPEISQTVSGKLGNESPTE CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCH KSQTVSRKFDLSELAQVFTLPWSAYVRLLSVKDDHARQFYETEALRGGWSVRQLDRQIGS HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH QFYERTALSKDKATMLVKGSVAKPEDAVTPSDAIKDPYVLEFLDLKDEYSESDLEAALIQ HHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH RLEDFLLELGEGF HHHHHHHHHCCCC >Mature Secondary Structure PTAAGKSAALPAGYAGIHGGIVELLDAARQAAARSVNALMTASYWEIGRRIVEAEQKGR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RRAGYGEQLMERLSADLTARFGRGFGVNNLESMRRFYLSYSQPEISQTVSGKLGNESPTE CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCH KSQTVSRKFDLSELAQVFTLPWSAYVRLLSVKDDHARQFYETEALRGGWSVRQLDRQIGS HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH QFYERTALSKDKATMLVKGSVAKPEDAVTPSDAIKDPYVLEFLDLKDEYSESDLEAALIQ HHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH RLEDFLLELGEGF HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]