| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is pgsA [H]
Identifier: 21242832
GI number: 21242832
Start: 2442689
End: 2443321
Strand: Direct
Name: pgsA [H]
Synonym: XAC2093
Alternate gene names: 21242832
Gene position: 2442689-2443321 (Clockwise)
Preceding gene: 21242831
Following gene: 21242833
Centisome position: 47.2
GC content: 60.66
Gene sequence:
>633_bases ATGAAGTTGACCATCCCCACGTGGCTGACACTGCTGAGGATCGTGATGATCCCGGTGTTGGTCGTGGTGTTCTACCTGCC CTACACGTGGACGAACTTCGCGTCCGCCGGCGTGTTTGCGCTGGCCGCCATCACCGACTGGCTGGATGGCTGGGTCGCGC GGCGTTATCACCAATATTCCGCATTCGGCGCATTTCTGGACCCGGTCGCCGACAAGTTGATGGTCGCGGTGGCGCTGTTC CTGATTGTGCAGGGCCATCCCACGCCGTGGATGGCGTTCTGGGCGGCAGTCATCGTCGGACGCGAGATTGCCGTCTCTGC ACTCCGCGAATGGATGGCCGAGATCGGCCAGCGCGCCAAGGTGCGCGTGGCGGCCATCGGCAAGATCAAAACCACCGCAC AAATGGTGGCGTTGCTGTGCCTGTTGTATTCGGTCACCCCAGGGCAGATGCCTACGCATGAAATCTGGCTGGGCAACCTG ATTTTTCGTGCGGGCTACTGGACGCTGGCCATTGCGGCCTTGCTGACGCTGTGGTCAGGGTTTCAGTATCTGCAGGCCGC GTGGCCAAGCCTGCGCGCCGACGAGAAAGCAGCGATCAGCAACAAGCCGAAAAAAATCGAAAGCAACAGTTGA
Upstream 100 bases:
>100_bases TTGCACGGGTGGAGGGGGTCAATGCCGCACTTGCCGCGCGAATCTACGCTAACCTGCACGGGCTGGCGCTTCCCGATGCG GCAGGCGAGGCAAGTCCGCA
Downstream 100 bases:
>100_bases CAGCTATCCCGTTCACTGTAGAATTTCGCCTCCCAAGCGGGAATAGCTCAGTTGGTAGAGCGCAACCTTGCCAAGGTTGA GGTCGCGAGTTCGAGTCTCG
Product: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MKLTIPTWLTLLRIVMIPVLVVVFYLPYTWTNFASAGVFALAAITDWLDGWVARRYHQYSAFGAFLDPVADKLMVAVALF LIVQGHPTPWMAFWAAVIVGREIAVSALREWMAEIGQRAKVRVAAIGKIKTTAQMVALLCLLYSVTPGQMPTHEIWLGNL IFRAGYWTLAIAALLTLWSGFQYLQAAWPSLRADEKAAISNKPKKIESNS
Sequences:
>Translated_210_residues MKLTIPTWLTLLRIVMIPVLVVVFYLPYTWTNFASAGVFALAAITDWLDGWVARRYHQYSAFGAFLDPVADKLMVAVALF LIVQGHPTPWMAFWAAVIVGREIAVSALREWMAEIGQRAKVRVAAIGKIKTTAQMVALLCLLYSVTPGQMPTHEIWLGNL IFRAGYWTLAIAALLTLWSGFQYLQAAWPSLRADEKAAISNKPKKIESNS >Mature_210_residues MKLTIPTWLTLLRIVMIPVLVVVFYLPYTWTNFASAGVFALAAITDWLDGWVARRYHQYSAFGAFLDPVADKLMVAVALF LIVQGHPTPWMAFWAAVIVGREIAVSALREWMAEIGQRAKVRVAAIGKIKTTAQMVALLCLLYSVTPGQMPTHEIWLGNL IFRAGYWTLAIAALLTLWSGFQYLQAAWPSLRADEKAAISNKPKKIESNS
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=194, Percent_Identity=51.5463917525773, Blast_Score=181, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6320059, Length=208, Percent_Identity=32.2115384615385, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 23440; Mature: 23440
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTIPTWLTLLRIVMIPVLVVVFYLPYTWTNFASAGVFALAAITDWLDGWVARRYHQYS CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFGAFLDPVADKLMVAVALFLIVQGHPTPWMAFWAAVIVGREIAVSALREWMAEIGQRAK HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VRVAAIGKIKTTAQMVALLCLLYSVTPGQMPTHEIWLGNLIFRAGYWTLAIAALLTLWSG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQYLQAAWPSLRADEKAAISNKPKKIESNS HHHHHHHCCCCCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure MKLTIPTWLTLLRIVMIPVLVVVFYLPYTWTNFASAGVFALAAITDWLDGWVARRYHQYS CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFGAFLDPVADKLMVAVALFLIVQGHPTPWMAFWAAVIVGREIAVSALREWMAEIGQRAK HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VRVAAIGKIKTTAQMVALLCLLYSVTPGQMPTHEIWLGNLIFRAGYWTLAIAALLTLWSG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQYLQAAWPSLRADEKAAISNKPKKIESNS HHHHHHHCCCCCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA