Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21242819

Identifier: 21242819

GI number: 21242819

Start: 2427562

End: 2427927

Strand: Direct

Name: 21242819

Synonym: XAC2080

Alternate gene names: NA

Gene position: 2427562-2427927 (Clockwise)

Preceding gene: 21242818

Following gene: 21242820

Centisome position: 46.9

GC content: 67.76

Gene sequence:

>366_bases
GTGTTGGTGGCGCTCGCCGTGTGGGCGGTGTGGCGCAGCGGCGTACCGCTGTGGTTGGCCCTGTTGTTGTCTGCCTACGC
GGTGCTTGCAGGCGGGCGAGCAGTGCGTCAGCTGTTGCGTTCGCCAGTGAGGCAATTGCTGGTGCCATGGACGCAAACGC
CCGCCAGCATTGACGGTGTGGAGGTGGAAGAGCTGCAGGTACGCTGGCGCGGGCCGCTTGCGGTGGTGTCTTGGAAGCGG
GCGGATGGTCGGCGCGAGCGCCTGCATTTCTGGCCGGACACCTTGCCGGCGCCGCAACGACGTGAACTGCGTCTGGCCGC
TCAGGCCCACGCCATTTCGTCCGGGCGGCCGCTAGTGGCACCATAG

Upstream 100 bases:

>100_bases
GAGGCCTGCCCCGATGCCGCCAACGCCGCACTCATCGCCGATATTCGCGCCCTGCCGGCTTGAGTGGCGACCCTCGCGCT
GGCTGATCTGCGCATTCGGC

Downstream 100 bases:

>100_bases
CGTCCCTTTCCCGGTTGAACCGCATGTTCAAACCTATTCCGGTTGCCATCGGCTTGCGCTATCTGCGTGCCAAGCGGCGC
AATGGCTTCATCTCGTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MLVALAVWAVWRSGVPLWLALLLSAYAVLAGGRAVRQLLRSPVRQLLVPWTQTPASIDGVEVEELQVRWRGPLAVVSWKR
ADGRRERLHFWPDTLPAPQRRELRLAAQAHAISSGRPLVAP

Sequences:

>Translated_121_residues
MLVALAVWAVWRSGVPLWLALLLSAYAVLAGGRAVRQLLRSPVRQLLVPWTQTPASIDGVEVEELQVRWRGPLAVVSWKR
ADGRRERLHFWPDTLPAPQRRELRLAAQAHAISSGRPLVAP
>Mature_121_residues
MLVALAVWAVWRSGVPLWLALLLSAYAVLAGGRAVRQLLRSPVRQLLVPWTQTPASIDGVEVEELQVRWRGPLAVVSWKR
ADGRRERLHFWPDTLPAPQRRELRLAAQAHAISSGRPLVAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13524; Mature: 13524

Theoretical pI: Translated: 12.21; Mature: 12.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVALAVWAVWRSGVPLWLALLLSAYAVLAGGRAVRQLLRSPVRQLLVPWTQTPASIDGV
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
EVEELQVRWRGPLAVVSWKRADGRRERLHFWPDTLPAPQRRELRLAAQAHAISSGRPLVA
CHHHHHHHCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
P
C
>Mature Secondary Structure
MLVALAVWAVWRSGVPLWLALLLSAYAVLAGGRAVRQLLRSPVRQLLVPWTQTPASIDGV
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
EVEELQVRWRGPLAVVSWKRADGRRERLHFWPDTLPAPQRRELRLAAQAHAISSGRPLVA
CHHHHHHHCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA