| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is pgl [H]
Identifier: 21242808
GI number: 21242808
Start: 2417622
End: 2418341
Strand: Reverse
Name: pgl [H]
Synonym: XAC2069
Alternate gene names: 21242808
Gene position: 2418341-2417622 (Counterclockwise)
Preceding gene: 21242809
Following gene: 21242807
Centisome position: 46.73
GC content: 67.92
Gene sequence:
>720_bases ATGAATCTGCAGGACAACCCGCGCATCACCCTGGTGCGCTACGACGACCCGGCCGAATGGACCGAGGCGGTGGCCAGCGA AATGGCCGACCTGCTGGAACAGGAGATCTCCCGGCGTGGCCAAGCACGCATGCTGCTGTCCGGCGGCACCACGCCAGCGC CGGTGTACGAGTCCCTCGCCCACCGGCCGCTGGACTGGTCGCGGGTGGAAGTGGGCCTGGTCGATGAACGCTGGTTGTCG CCGCAGGATCAGGACAGCAATGCCTGGCTGGTCAATCACAGCTTCCTGACCCACGCATCGGCCGCGACCTTCATTCCGCT GGTCCGTCCGGGCAAGCAACTGCCCGAATGCGTGCACACCGCCAACCTGCAGGCCAGGCATGCCGAACCGGCCTGCCTGG CAGTGCTGGGCATGGGCGGCGACGGGCACACCGCGTCGTTGTTCCCGGGTGCCACCGACCTGCCGAAGGCGCTCGCCAGC CCGCAGCCGTACGCATCGCTGGATGCCACCGGCTGCCCGGGCTCGAACCAATGGCCGTTGCGCATCACCCTGACGCCCGC AGGGCTTGCCAGCATTCCAACGCGCCTGCTGCTGTTGCGTGGCAAGCAGAAGCTGGACGTGCTGCAGGCCGCGTTGGCCG GCGACGACATCAATGAGTATCCGATCCGCGTGGCGCTGCAGCAGCCCGGTCCGCGGTTGCGGGTGCATTGGTGCGCTTGA
Upstream 100 bases:
>100_bases CGAAGGTGCCATCGCTGGCGGTCATGCACCCGCATGCCGGCCTGCTGGGCGCCGCCGCCTACGCGGTGGATGCACAACGT CAGCACCCCGGGGAGCAGCG
Downstream 100 bases:
>100_bases GTGCGAGTCCCTCGCAAGAGCCCGCACATCCTTGTGCGGGGATTTAAGAAAAACGCTTTCTTCCCCCGTTTCTCATAGCC GGTAGCCAATGAGCCTGCAT
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MNLQDNPRITLVRYDDPAEWTEAVASEMADLLEQEISRRGQARMLLSGGTTPAPVYESLAHRPLDWSRVEVGLVDERWLS PQDQDSNAWLVNHSFLTHASAATFIPLVRPGKQLPECVHTANLQARHAEPACLAVLGMGGDGHTASLFPGATDLPKALAS PQPYASLDATGCPGSNQWPLRITLTPAGLASIPTRLLLLRGKQKLDVLQAALAGDDINEYPIRVALQQPGPRLRVHWCA
Sequences:
>Translated_239_residues MNLQDNPRITLVRYDDPAEWTEAVASEMADLLEQEISRRGQARMLLSGGTTPAPVYESLAHRPLDWSRVEVGLVDERWLS PQDQDSNAWLVNHSFLTHASAATFIPLVRPGKQLPECVHTANLQARHAEPACLAVLGMGGDGHTASLFPGATDLPKALAS PQPYASLDATGCPGSNQWPLRITLTPAGLASIPTRLLLLRGKQKLDVLQAALAGDDINEYPIRVALQQPGPRLRVHWCA >Mature_239_residues MNLQDNPRITLVRYDDPAEWTEAVASEMADLLEQEISRRGQARMLLSGGTTPAPVYESLAHRPLDWSRVEVGLVDERWLS PQDQDSNAWLVNHSFLTHASAATFIPLVRPGKQLPECVHTANLQARHAEPACLAVLGMGGDGHTASLFPGATDLPKALAS PQPYASLDATGCPGSNQWPLRITLTPAGLASIPTRLLLLRGKQKLDVLQAALAGDDINEYPIRVALQQPGPRLRVHWCA
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=227, Percent_Identity=27.3127753303965, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 [H]
Pfam domain/function: NA
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 25997; Mature: 25997
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLQDNPRITLVRYDDPAEWTEAVASEMADLLEQEISRRGQARMLLSGGTTPAPVYESLA CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH HRPLDWSRVEVGLVDERWLSPQDQDSNAWLVNHSFLTHASAATFIPLVRPGKQLPECVHT CCCCCCCEEEEEEEHHHCCCCCCCCCCEEEEECHHHHHCCHHHEEECCCCCHHHHHHHHH ANLQARHAEPACLAVLGMGGDGHTASLFPGATDLPKALASPQPYASLDATGCPGSNQWPL CCCCCCCCCCEEEEEEECCCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCE RITLTPAGLASIPTRLLLLRGKQKLDVLQAALAGDDINEYPIRVALQQPGPRLRVHWCA EEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECC >Mature Secondary Structure MNLQDNPRITLVRYDDPAEWTEAVASEMADLLEQEISRRGQARMLLSGGTTPAPVYESLA CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH HRPLDWSRVEVGLVDERWLSPQDQDSNAWLVNHSFLTHASAATFIPLVRPGKQLPECVHT CCCCCCCEEEEEEEHHHCCCCCCCCCCEEEEECHHHHHCCHHHEEECCCCCHHHHHHHHH ANLQARHAEPACLAVLGMGGDGHTASLFPGATDLPKALASPQPYASLDATGCPGSNQWPL CCCCCCCCCCEEEEEEECCCCCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCE RITLTPAGLASIPTRLLLLRGKQKLDVLQAALAGDDINEYPIRVALQQPGPRLRVHWCA EEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]