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The map label for this gene is yhfW [H]

Identifier: 21242795

GI number: 21242795

Start: 2394616

End: 2395827

Strand: Reverse

Name: yhfW [H]

Synonym: XAC2051

Alternate gene names: 21242795

Gene position: 2395827-2394616 (Counterclockwise)

Preceding gene: 21242798

Following gene: 21242789

Centisome position: 46.29

GC content: 65.26

Gene sequence:

>1212_bases
ATGGACCTCAAAAGTGGCTACCCGTTCTGGTCGATCCGCAACGGCTTGATGCGCGCCTACCCGCGCCTGGAGCAAGACAC
CCAATGCGAGGTCGCCATCGTCGGTGGTGGCGTCACCGCCGCGCTGATCGCGCACGAATTGCTGCGCCACGGCCATGAAG
TCGTAGTGATCGAACAGCGCGACATCGGCTGGGGGAGCACCTCGGCCAGCACCGCCTTGCTGCAGTACGAAATCGATACG
CCGATGATCGAACTGGCCAAGCAGTACGGCATGTCCGCCGCGGCGCTGGCGTATGGCGCCTGCGCGCAAGCCATCCTCGA
CCTGCAGGGCCTGTGCAATACCCTCGGCGGCACCGACTTCACGCGCCAGGACAGCCTGTACTACGCCAGCCGCCCGCGCG
ACATAAAAGACCTGCGCAACGAGCTGGAGACCCGCAAGGCGCACAAACTGCCGGTGGAATGGATCGAACGCGAGCCGCTC
TGGCACAACTACGGCGTGCATTCGGATGGCGCGATCCTGAGCCGCTTGGCCGCCAGCGTGGACCCGTACCGCCTCTGCTA
CCGCCTGTTTTCCGAGTGCGAGCAGTACGGCGCACGCATCCACGACCGCACCGCCATCGCCTCGATCGAACCGCACGACC
CGCACGTCGACCTGCGCACCGAAGACGGTGTGAGCGTGCGTGCCCGTCACGTGATCCTGGCGGCCGGCTATGGCAACCAG
CGCTGGCTCTCGCAGCCGGTGGCGCGCAATCGCAGCAGCTACGCCTTCGTGACCGACCCCCTGCACGACAGCGACATGGG
CGCGCTCAAGCACACCATGATGTGGGAAACCGCGCGCCCGTATCTGTACGTGCGCAGCACACCGGACGGGCGCGTGGTCG
CTGGCGGAGAAGACGACAACATCGACATTCCCGCGCGCCGCGACGCACGCGTGCAGAGCAAGCTCAAGACGCTGCTGAAG
AAAATTGGCAAGACCATGCCCGATATGCGACTGCGCCCAGCGTTCGCATGGGCCGGCACTTTCGCAGAGACTGCCGATGG
ATTGCCGTTCTTCGGGCCGCATGCCGAACTCGGGCCGCGCGTGTCGTTCGCGATGGCCTATGGCGGCAACGGAATTACCT
ATAGCGCCATTGGTGCGGGCTTATTGCGCGCACAACTGGAGGGCACGCCTCATGCGCTGTCCGGATTGTTCGGCTTCTCG
CGCCTGGGCTGA

Upstream 100 bases:

>100_bases
TTTGCCGTTTGGTGACGGCGGCAAGGCCGGGCTCGCCTCACGGCCGCTTCACCCCGCTTGGCCGTCAATCGCCATCCGCC
TGCTCGCTGATCGACACCGC

Downstream 100 bases:

>100_bases
GGCCCCCACGGCCACCAACCATGGCCATGCATCGCATACGTATCGGCAGCCCGCTCCAGCGGGTTGCGCACGTGGATGCC
GCCGCACAGAAAATACACGG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MDLKSGYPFWSIRNGLMRAYPRLEQDTQCEVAIVGGGVTAALIAHELLRHGHEVVVIEQRDIGWGSTSASTALLQYEIDT
PMIELAKQYGMSAAALAYGACAQAILDLQGLCNTLGGTDFTRQDSLYYASRPRDIKDLRNELETRKAHKLPVEWIEREPL
WHNYGVHSDGAILSRLAASVDPYRLCYRLFSECEQYGARIHDRTAIASIEPHDPHVDLRTEDGVSVRARHVILAAGYGNQ
RWLSQPVARNRSSYAFVTDPLHDSDMGALKHTMMWETARPYLYVRSTPDGRVVAGGEDDNIDIPARRDARVQSKLKTLLK
KIGKTMPDMRLRPAFAWAGTFAETADGLPFFGPHAELGPRVSFAMAYGGNGITYSAIGAGLLRAQLEGTPHALSGLFGFS
RLG

Sequences:

>Translated_403_residues
MDLKSGYPFWSIRNGLMRAYPRLEQDTQCEVAIVGGGVTAALIAHELLRHGHEVVVIEQRDIGWGSTSASTALLQYEIDT
PMIELAKQYGMSAAALAYGACAQAILDLQGLCNTLGGTDFTRQDSLYYASRPRDIKDLRNELETRKAHKLPVEWIEREPL
WHNYGVHSDGAILSRLAASVDPYRLCYRLFSECEQYGARIHDRTAIASIEPHDPHVDLRTEDGVSVRARHVILAAGYGNQ
RWLSQPVARNRSSYAFVTDPLHDSDMGALKHTMMWETARPYLYVRSTPDGRVVAGGEDDNIDIPARRDARVQSKLKTLLK
KIGKTMPDMRLRPAFAWAGTFAETADGLPFFGPHAELGPRVSFAMAYGGNGITYSAIGAGLLRAQLEGTPHALSGLFGFS
RLG
>Mature_403_residues
MDLKSGYPFWSIRNGLMRAYPRLEQDTQCEVAIVGGGVTAALIAHELLRHGHEVVVIEQRDIGWGSTSASTALLQYEIDT
PMIELAKQYGMSAAALAYGACAQAILDLQGLCNTLGGTDFTRQDSLYYASRPRDIKDLRNELETRKAHKLPVEWIEREPL
WHNYGVHSDGAILSRLAASVDPYRLCYRLFSECEQYGARIHDRTAIASIEPHDPHVDLRTEDGVSVRARHVILAAGYGNQ
RWLSQPVARNRSSYAFVTDPLHDSDMGALKHTMMWETARPYLYVRSTPDGRVVAGGEDDNIDIPARRDARVQSKLKTLLK
KIGKTMPDMRLRPAFAWAGTFAETADGLPFFGPHAELGPRVSFAMAYGGNGITYSAIGAGLLRAQLEGTPHALSGLFGFS
RLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1787559, Length=393, Percent_Identity=24.9363867684478, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR017941
- InterPro:   IPR005805 [H]

Pfam domain/function: PF01266 DAO; PF00355 Rieske [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 44544; Mature: 44544

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLKSGYPFWSIRNGLMRAYPRLEQDTQCEVAIVGGGVTAALIAHELLRHGHEVVVIEQR
CCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEC
DIGWGSTSASTALLQYEIDTPMIELAKQYGMSAAALAYGACAQAILDLQGLCNTLGGTDF
CCCCCCCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TRQDSLYYASRPRDIKDLRNELETRKAHKLPVEWIEREPLWHNYGVHSDGAILSRLAASV
CCCCCEEECCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCC
DPYRLCYRLFSECEQYGARIHDRTAIASIEPHDPHVDLRTEDGVSVRARHVILAAGYGNQ
CHHHHHHHHHHHHHHHCCCHHCCCEEEECCCCCCCEEEECCCCCEEEEEEEEEEECCCCH
RWLSQPVARNRSSYAFVTDPLHDSDMGALKHTMMWETARPYLYVRSTPDGRVVAGGEDDN
HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCC
IDIPARRDARVQSKLKTLLKKIGKTMPDMRLRPAFAWAGTFAETADGLPFFGPHAELGPR
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCC
VSFAMAYGGNGITYSAIGAGLLRAQLEGTPHALSGLFGFSRLG
EEEEEEECCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLKSGYPFWSIRNGLMRAYPRLEQDTQCEVAIVGGGVTAALIAHELLRHGHEVVVIEQR
CCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEC
DIGWGSTSASTALLQYEIDTPMIELAKQYGMSAAALAYGACAQAILDLQGLCNTLGGTDF
CCCCCCCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TRQDSLYYASRPRDIKDLRNELETRKAHKLPVEWIEREPLWHNYGVHSDGAILSRLAASV
CCCCCEEECCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCC
DPYRLCYRLFSECEQYGARIHDRTAIASIEPHDPHVDLRTEDGVSVRARHVILAAGYGNQ
CHHHHHHHHHHHHHHHCCCHHCCCEEEECCCCCCCEEEECCCCCEEEEEEEEEEECCCCH
RWLSQPVARNRSSYAFVTDPLHDSDMGALKHTMMWETARPYLYVRSTPDGRVVAGGEDDN
HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCC
IDIPARRDARVQSKLKTLLKKIGKTMPDMRLRPAFAWAGTFAETADGLPFFGPHAELGPR
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCC
VSFAMAYGGNGITYSAIGAGLLRAQLEGTPHALSGLFGFSRLG
EEEEEEECCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]