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The map label for this gene is flgC [H]

Identifier: 21242729

GI number: 21242729

Start: 2317877

End: 2318284

Strand: Reverse

Name: flgC [H]

Synonym: XAC1985

Alternate gene names: 21242729

Gene position: 2318284-2317877 (Counterclockwise)

Preceding gene: 21242730

Following gene: 21242728

Centisome position: 44.79

GC content: 63.73

Gene sequence:

>408_bases
ATGAGCAATCTTCCCATCTTCGATGTGGCCGGCTCGGCCCTGCACGCGCAGTCGGTGCGCCTGAGCACCATCGCGTCCAA
TCTGGCCAATGCCGATTCGGTCGCAGGCTCGGCCGAGGCCACTTACAAGCCGATCGAGCCGATCTTCCAGGCCCAGCAAA
GCCGCCAGGACCCCAGCCTGACCTCGGTGAACGTCAAAGAGATCACCACCACCAATGCGCCGCCGATCCGCCGCTACGAA
CCCGGCCACCCGCTGGCTGACGCCGAGGGCTATGTGTTCTCGCCCGACGTGGACCCGGTCTCGCAGATGGTCAACATGAT
TTCCGCCTCGCGCAATTACCAGGCAGGCGTGGAAATGCTCAATACCGCCAAGGAACTGGCGCTCGCGACCCTCACCATGG
GTCGCTGA

Upstream 100 bases:

>100_bases
CGCCGCCTACGGCCGCGCCGCGCTGGAATACCGCGCGTCGCTGAGCTTCCTCGAATCCAAGGTGCGCTCGATGCTCACCG
CGATCACGGGCCAATAAGTC

Downstream 100 bases:

>100_bases
CCCTTCCTAGCTGACCCTCACCAACGGAACACTCCACATGAGCACGATCGGCAGCGATCTCTACAAAAGCCTTGGCCTGA
GTACCAGCAGCACCGTCGCC

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MSNLPIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQAQQSRQDPSLTSVNVKEITTTNAPPIRRYE
PGHPLADAEGYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLTMGR

Sequences:

>Translated_135_residues
MSNLPIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQAQQSRQDPSLTSVNVKEITTTNAPPIRRYE
PGHPLADAEGYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLTMGR
>Mature_134_residues
SNLPIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQAQQSRQDPSLTSVNVKEITTTNAPPIRRYEP
GHPLADAEGYVFSPDVDPVSQMVNMISASRNYQAGVEMLNTAKELALATLTMGR

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=135, Percent_Identity=51.8518518518518, Blast_Score=127, Evalue=2e-31,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14405; Mature: 14274

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLPIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQAQQSRQDPSL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHCCCCCCC
TSVNVKEITTTNAPPIRRYEPGHPLADAEGYVFSPDVDPVSQMVNMISASRNYQAGVEML
CCCCHHHEECCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHH
NTAKELALATLTMGR
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNLPIFDVAGSALHAQSVRLSTIASNLANADSVAGSAEATYKPIEPIFQAQQSRQDPSL
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHCCCCCCC
TSVNVKEITTTNAPPIRRYEPGHPLADAEGYVFSPDVDPVSQMVNMISASRNYQAGVEML
CCCCHHHEECCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHH
NTAKELALATLTMGR
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]