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The map label for this gene is vioA [H]

Identifier: 21242710

GI number: 21242710

Start: 2297368

End: 2298477

Strand: Reverse

Name: vioA [H]

Synonym: XAC1966

Alternate gene names: 21242710

Gene position: 2298477-2297368 (Counterclockwise)

Preceding gene: 21242711

Following gene: 21242709

Centisome position: 44.41

GC content: 62.07

Gene sequence:

>1110_bases
ATGCCCATCCCCGTCACCAGTCCGCTGCTGCCGCCGCTGGAAGAATTTCTGCCCTATCTGGAGCGGATATGGACCAGCCG
CATCGTCAGCAACGGTGGCGAGATGCACCATGCACTCGAACGCGCACTGTGCGAGTACCTGGGGGTGCCGCACCTGGCAT
TGCTGACCAACGGCACTACCGCCCTGATCACCGCGCTGCAGGCGCTGCGCATCACCGGTGAAGTGATCACCACGCCCTAC
TCGTTCGTTGCCACCGCGCATTCGCTGTTGTGGAAAAGCATCACGCCGGTGTTCGTGGACATCGACCCGGTGACGCTCAA
CATGGACCCTTCGAAGATCGAAGCGGCCATCACCCCGCAGACCACCGCGATCATGCCGGTGCATTGCTACGGCACTGCCT
GCGATACGACAGCCATCACGCGTATCGCCGACATCTACAACCTCAAGGTCATCTACGACGCTGCGCATGCATTCGGTGTG
CGCGACGACGGCGGCTCGATCCTGCGCCATGGCGACCTGAGCGTGTTGAGCTTCCATGCGACCAAGGTCTTCAATACCTT
CGAAGGCGGCGCGATCGTCTGTCCCGACGAAAGGAGCTACCAGCGCATCGGGCATCTGAAGAACTTCGGCTTCGTCGACG
AAACCACGGTGGTGGCACCGGGCATCAATGGCAAGATGAACGAGATCAGCGCGGCGTTCGGCCTGCTGCAGCTGCAGCAC
ATCGACGACGCCATCGCCCAGCGCAGCGCCATCGATGCGCAATACCGCCAACGGTTGAGCGATGTGCGCGGCATCCGCTG
CGTTGCGCGGCCCTCACATTCCCGCCCCAATTATGCGTATTTCCCGGTACTGGTGCAGGACGACTACCCGCTGTCGCGCG
ATGCGCTGTACCAACTGATGCGCGAGCACGGCATTCTGGTGCGGCGCTATTTCTATCCGTTGATCAGCGACTTCCCGATG
TACCGTGCTCTGCCCTCGTCGGCGCCGGCATGGTTGCCGGTGGCGCGCTCAGTGGCGGCGCAGGTATTGTGCCTGCCGAT
TTTTCCTGGCTTGAGTCGCGATCAGGTCGATACCATCGCCGATCTCATCGCCGGCCAACAGGCGACATGA

Upstream 100 bases:

>100_bases
CGGCTCGCTGGCATAGCGCTTGCTTCAGCAGGATCACTCCGTTCGCAGCCGCCGGCTGCGAACGGAATCCCGACCTTCAC
CAGCACTTGCCGAGGCATTG

Downstream 100 bases:

>100_bases
CCGTACAACGCTGCACCTGCATTTCAACCTCACATCTCCACAACAGGCACCCAGGCGAGCTCGCATGACCCAGGCAACAT
TTATCGAGAACTTCCTCTCC

Product: nucleotide sugar transaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MPIPVTSPLLPPLEEFLPYLERIWTSRIVSNGGEMHHALERALCEYLGVPHLALLTNGTTALITALQALRITGEVITTPY
SFVATAHSLLWKSITPVFVDIDPVTLNMDPSKIEAAITPQTTAIMPVHCYGTACDTTAITRIADIYNLKVIYDAAHAFGV
RDDGGSILRHGDLSVLSFHATKVFNTFEGGAIVCPDERSYQRIGHLKNFGFVDETTVVAPGINGKMNEISAAFGLLQLQH
IDDAIAQRSAIDAQYRQRLSDVRGIRCVARPSHSRPNYAYFPVLVQDDYPLSRDALYQLMREHGILVRRYFYPLISDFPM
YRALPSSAPAWLPVARSVAAQVLCLPIFPGLSRDQVDTIADLIAGQQAT

Sequences:

>Translated_369_residues
MPIPVTSPLLPPLEEFLPYLERIWTSRIVSNGGEMHHALERALCEYLGVPHLALLTNGTTALITALQALRITGEVITTPY
SFVATAHSLLWKSITPVFVDIDPVTLNMDPSKIEAAITPQTTAIMPVHCYGTACDTTAITRIADIYNLKVIYDAAHAFGV
RDDGGSILRHGDLSVLSFHATKVFNTFEGGAIVCPDERSYQRIGHLKNFGFVDETTVVAPGINGKMNEISAAFGLLQLQH
IDDAIAQRSAIDAQYRQRLSDVRGIRCVARPSHSRPNYAYFPVLVQDDYPLSRDALYQLMREHGILVRRYFYPLISDFPM
YRALPSSAPAWLPVARSVAAQVLCLPIFPGLSRDQVDTIADLIAGQQAT
>Mature_368_residues
PIPVTSPLLPPLEEFLPYLERIWTSRIVSNGGEMHHALERALCEYLGVPHLALLTNGTTALITALQALRITGEVITTPYS
FVATAHSLLWKSITPVFVDIDPVTLNMDPSKIEAAITPQTTAIMPVHCYGTACDTTAITRIADIYNLKVIYDAAHAFGVR
DDGGSILRHGDLSVLSFHATKVFNTFEGGAIVCPDERSYQRIGHLKNFGFVDETTVVAPGINGKMNEISAAFGLLQLQHI
DDAIAQRSAIDAQYRQRLSDVRGIRCVARPSHSRPNYAYFPVLVQDDYPLSRDALYQLMREHGILVRRYFYPLISDFPMY
RALPSSAPAWLPVARSVAAQVLCLPIFPGLSRDQVDTIADLIAGQQAT

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=384, Percent_Identity=30.46875, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI2367285, Length=327, Percent_Identity=29.0519877675841, Blast_Score=104, Evalue=9e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 40687; Mature: 40556

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIPVTSPLLPPLEEFLPYLERIWTSRIVSNGGEMHHALERALCEYLGVPHLALLTNGTT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCHH
ALITALQALRITGEVITTPYSFVATAHSLLWKSITPVFVDIDPVTLNMDPSKIEAAITPQ
HHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHCCCCEEEECCEEEECCCHHHHEEEECCC
TTAIMPVHCYGTACDTTAITRIADIYNLKVIYDAAHAFGVRDDGGSILRHGDLSVLSFHA
CEEEEEEEECCCCCCHHHHHHHHHHHHEEEEEEHHHHCCCCCCCCCEEECCCCEEEEHHH
TKVFNTFEGGAIVCPDERSYQRIGHLKNFGFVDETTVVAPGINGKMNEISAAFGLLQLQH
HHHHHCCCCCEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH
IDDAIAQRSAIDAQYRQRLSDVRGIRCVARPSHSRPNYAYFPVLVQDDYPLSRDALYQLM
HHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEEEEECCCCCCHHHHHHHH
REHGILVRRYFYPLISDFPMYRALPSSAPAWLPVARSVAAQVLCLPIFPGLSRDQVDTIA
HHCCHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHH
DLIAGQQAT
HHHCCCCCC
>Mature Secondary Structure 
PIPVTSPLLPPLEEFLPYLERIWTSRIVSNGGEMHHALERALCEYLGVPHLALLTNGTT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCHH
ALITALQALRITGEVITTPYSFVATAHSLLWKSITPVFVDIDPVTLNMDPSKIEAAITPQ
HHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHCCCCEEEECCEEEECCCHHHHEEEECCC
TTAIMPVHCYGTACDTTAITRIADIYNLKVIYDAAHAFGVRDDGGSILRHGDLSVLSFHA
CEEEEEEEECCCCCCHHHHHHHHHHHHEEEEEEHHHHCCCCCCCCCEEECCCCEEEEHHH
TKVFNTFEGGAIVCPDERSYQRIGHLKNFGFVDETTVVAPGINGKMNEISAAFGLLQLQH
HHHHHCCCCCEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH
IDDAIAQRSAIDAQYRQRLSDVRGIRCVARPSHSRPNYAYFPVLVQDDYPLSRDALYQLM
HHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEEEEECCCCCCHHHHHHHH
REHGILVRRYFYPLISDFPMYRALPSSAPAWLPVARSVAAQVLCLPIFPGLSRDQVDTIA
HHCCHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHH
DLIAGQQAT
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]