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The map label for this gene is flhF [H]

Identifier: 21242679

GI number: 21242679

Start: 2259801

End: 2261501

Strand: Reverse

Name: flhF [H]

Synonym: XAC1935

Alternate gene names: 21242679

Gene position: 2261501-2259801 (Counterclockwise)

Preceding gene: 21242680

Following gene: 21242678

Centisome position: 43.7

GC content: 71.02

Gene sequence:

>1701_bases
ATGAAAATCAAACGCTTCGTCGCCCCGGACATGCGCACCGCATTCCGCATGGTGCGTGAAGAACACGGCCCGGACGCGGT
GATCCTGTCCAACCGTCGCACCGCCGAAGGCATCGAGATCGTCGCTGCCAGCAATTACGACGAAGAGCTCGTGCAGCGCG
CCCTGGAAACCGCGCGCTCGGACACCCCGGCCTCCGCACAGCACCAGCAGGCTCCCGCGCAGCAGGCGCCGGCCCCGCAA
GTCCCGGCCAAGCCCGCTGCACCGGTGCACGCGCTGCTCAAGCCGTCTGCCGACGCCGAGGCCAGCCAGCGCCAGCGCGT
GGCCAGCGCCGCCGACGACATGATCGCCGCCATGGCGCTGCGCCAGCCGGTCAGCGTGCCGCGCCAGGCGCCGGTCGCCG
CTCCGGTGCGCACCGCCAGCATTCCTTCGCCCGCTGCCCAGGCACTCGCCCACGCGGTTGCCGTCACCGCTGCGCCGCGC
CAGGAACACGCGCTGTCGGCCGTGCCGGAACAGTTGTTCGCCGACTTTTTGACGACTGCCCCGGTGCAGCGCCCGGCCGT
CCCGGCCACGGCGGTGCAGGCACCCGCGCCGGTCGCGGTGGCAATGGCCAACGCCCCGGCCTTCGCTGCCGCAGGCCGGG
ACGACGACGCCTTCGCCGATGAAGCCGACTTCGATCTGGACGATGCCCTGCCGCAGATCCTGCCGCCGGCCGCGCTGCCG
CCCATCGTGGTCGCCCCGCCCGCCCCGCCGGCCCTGGCCGCCGTGCCGGTTGCCGCCACGCCCGCGCCGCAGAACGACGA
AGAACTCAAGCAGCTGCGCGGCGAACTGGCGCTGATGCGGCAGATGATCGAGCGCGAGATGAACCGCCTCACCGACGAGC
GCCTGCGTGGCTCGCCGGTGCGCGCCCAGGCGCTGGAACTGATGGACGACTACGGTTTCGACGCCGGCCTGACCCGCGAT
ATCGCCCTGCAGATCCCGGCCGATACCGAATTGCACCGTGGCCGCGGCCTGATGCTGGGCCTGCTGTCCAAGCGTCTGCC
GGTGGCCCCGGTCGACCCGTTGGAACGTGGCGGCGTGATCGCCCTGGTCGGGCCGACCGGCGCCGGCAAGACCACCACCA
TCGCCAAGCTTGCCCAGCGCTTCGCCGCCCAGCACGCCCCGCGCGACGTGGCCCTGGTCACCACCGACACCCAGCGCGTG
GGCGGCCGCGAACAGCTGCACAGCTACGGCCGCCAGCTCGGCATCGCGGTGCACGAGGCCGACAGCGCCGAAAGCCTGCT
GGACCTGCTCGAGCGCCTGCGCGACTACAAGCTGGTGCTGATCGACACCGCCGGCATGGGCCAGCGCGACCGCGCCCTGG
CCGCCCAGCTGAACTGGTTGCGCGCCGCCCAGCAGGTCACCTCGCTGCTGGTGCTGCCCGCCAACGCCCATTTTTCCGAC
CTCGACGAGGTCGTACGCCGCTTCGCCCACGCCAAACCCCAAGGCGTGGTGCTGACCAAACTCGACGAGACCGGCCGCTT
CGGCAGCGCCTTGTCGGTGGTGGTCGATCACCAAATGCCCATCACCTGGGTGACTGACGGACAGCGGGTCCCTGACGACC
TGCACCGCGCCAATGCCGCCAGTCTCGTTCTTCGCCTTGAAGATTTGCGGCGCGCTGCCGATAAGCCCTGTACTCCGGAG
CACAACCATGCAGTCGCGTGA

Upstream 100 bases:

>100_bases
CGAACGAACGGGACAGGCAACTCATGACGCTGGCAACACACCCACATTCATCGCATACCCGTCCGGCGTCCGGCGGGTCC
CGTTCCTGGAGGCACTTCGC

Downstream 100 bases:

>100_bases
ATACGCCAAGCTGACCAACGCCTTCCCCCTGTCGGCGACCCGTCCCGAGCCTTTGGGCCCGGTGCGCACCATTGCCGTGA
CCGGTGGCAAGGGCGGCGTG

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MKIKRFVAPDMRTAFRMVREEHGPDAVILSNRRTAEGIEIVAASNYDEELVQRALETARSDTPASAQHQQAPAQQAPAPQ
VPAKPAAPVHALLKPSADAEASQRQRVASAADDMIAAMALRQPVSVPRQAPVAAPVRTASIPSPAAQALAHAVAVTAAPR
QEHALSAVPEQLFADFLTTAPVQRPAVPATAVQAPAPVAVAMANAPAFAAAGRDDDAFADEADFDLDDALPQILPPAALP
PIVVAPPAPPALAAVPVAATPAPQNDEELKQLRGELALMRQMIEREMNRLTDERLRGSPVRAQALELMDDYGFDAGLTRD
IALQIPADTELHRGRGLMLGLLSKRLPVAPVDPLERGGVIALVGPTGAGKTTTIAKLAQRFAAQHAPRDVALVTTDTQRV
GGREQLHSYGRQLGIAVHEADSAESLLDLLERLRDYKLVLIDTAGMGQRDRALAAQLNWLRAAQQVTSLLVLPANAHFSD
LDEVVRRFAHAKPQGVVLTKLDETGRFGSALSVVVDHQMPITWVTDGQRVPDDLHRANAASLVLRLEDLRRAADKPCTPE
HNHAVA

Sequences:

>Translated_566_residues
MKIKRFVAPDMRTAFRMVREEHGPDAVILSNRRTAEGIEIVAASNYDEELVQRALETARSDTPASAQHQQAPAQQAPAPQ
VPAKPAAPVHALLKPSADAEASQRQRVASAADDMIAAMALRQPVSVPRQAPVAAPVRTASIPSPAAQALAHAVAVTAAPR
QEHALSAVPEQLFADFLTTAPVQRPAVPATAVQAPAPVAVAMANAPAFAAAGRDDDAFADEADFDLDDALPQILPPAALP
PIVVAPPAPPALAAVPVAATPAPQNDEELKQLRGELALMRQMIEREMNRLTDERLRGSPVRAQALELMDDYGFDAGLTRD
IALQIPADTELHRGRGLMLGLLSKRLPVAPVDPLERGGVIALVGPTGAGKTTTIAKLAQRFAAQHAPRDVALVTTDTQRV
GGREQLHSYGRQLGIAVHEADSAESLLDLLERLRDYKLVLIDTAGMGQRDRALAAQLNWLRAAQQVTSLLVLPANAHFSD
LDEVVRRFAHAKPQGVVLTKLDETGRFGSALSVVVDHQMPITWVTDGQRVPDDLHRANAASLVLRLEDLRRAADKPCTPE
HNHAVA
>Mature_566_residues
MKIKRFVAPDMRTAFRMVREEHGPDAVILSNRRTAEGIEIVAASNYDEELVQRALETARSDTPASAQHQQAPAQQAPAPQ
VPAKPAAPVHALLKPSADAEASQRQRVASAADDMIAAMALRQPVSVPRQAPVAAPVRTASIPSPAAQALAHAVAVTAAPR
QEHALSAVPEQLFADFLTTAPVQRPAVPATAVQAPAPVAVAMANAPAFAAAGRDDDAFADEADFDLDDALPQILPPAALP
PIVVAPPAPPALAAVPVAATPAPQNDEELKQLRGELALMRQMIEREMNRLTDERLRGSPVRAQALELMDDYGFDAGLTRD
IALQIPADTELHRGRGLMLGLLSKRLPVAPVDPLERGGVIALVGPTGAGKTTTIAKLAQRFAAQHAPRDVALVTTDTQRV
GGREQLHSYGRQLGIAVHEADSAESLLDLLERLRDYKLVLIDTAGMGQRDRALAAQLNWLRAAQQVTSLLVLPANAHFSD
LDEVVRRFAHAKPQGVVLTKLDETGRFGSALSVVVDHQMPITWVTDGQRVPDDLHRANAASLVLRLEDLRRAADKPCTPE
HNHAVA

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Escherichia coli, GI1789874, Length=215, Percent_Identity=31.6279069767442, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1788963, Length=201, Percent_Identity=29.3532338308458, Blast_Score=72, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 60425; Mature: 60425

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKRFVAPDMRTAFRMVREEHGPDAVILSNRRTAEGIEIVAASNYDEELVQRALETARS
CCCCHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHCC
DTPASAQHQQAPAQQAPAPQVPAKPAAPVHALLKPSADAEASQRQRVASAADDMIAAMAL
CCCCCCHHHHCCHHCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
RQPVSVPRQAPVAAPVRTASIPSPAAQALAHAVAVTAAPRQEHALSAVPEQLFADFLTTA
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
PVQRPAVPATAVQAPAPVAVAMANAPAFAAAGRDDDAFADEADFDLDDALPQILPPAALP
CCCCCCCCHHHCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
PIVVAPPAPPALAAVPVAATPAPQNDEELKQLRGELALMRQMIEREMNRLTDERLRGSPV
CEEECCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RAQALELMDDYGFDAGLTRDIALQIPADTELHRGRGLMLGLLSKRLPVAPVDPLERGGVI
HHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHCCCCHHHHHHHCCCCCCCCCCHHCCCEE
ALVGPTGAGKTTTIAKLAQRFAAQHAPRDVALVTTDTQRVGGREQLHSYGRQLGIAVHEA
EEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCCHHHHHHHHHHHCEEEECC
DSAESLLDLLERLRDYKLVLIDTAGMGQRDRALAAQLNWLRAAQQVTSLLVLPANAHFSD
CCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHH
LDEVVRRFAHAKPQGVVLTKLDETGRFGSALSVVVDHQMPITWVTDGQRVPDDLHRANAA
HHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHH
SLVLRLEDLRRAADKPCTPEHNHAVA
HHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKIKRFVAPDMRTAFRMVREEHGPDAVILSNRRTAEGIEIVAASNYDEELVQRALETARS
CCCCHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHCC
DTPASAQHQQAPAQQAPAPQVPAKPAAPVHALLKPSADAEASQRQRVASAADDMIAAMAL
CCCCCCHHHHCCHHCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
RQPVSVPRQAPVAAPVRTASIPSPAAQALAHAVAVTAAPRQEHALSAVPEQLFADFLTTA
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
PVQRPAVPATAVQAPAPVAVAMANAPAFAAAGRDDDAFADEADFDLDDALPQILPPAALP
CCCCCCCCHHHCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
PIVVAPPAPPALAAVPVAATPAPQNDEELKQLRGELALMRQMIEREMNRLTDERLRGSPV
CEEECCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RAQALELMDDYGFDAGLTRDIALQIPADTELHRGRGLMLGLLSKRLPVAPVDPLERGGVI
HHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHCCCCHHHHHHHCCCCCCCCCCHHCCCEE
ALVGPTGAGKTTTIAKLAQRFAAQHAPRDVALVTTDTQRVGGREQLHSYGRQLGIAVHEA
EEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCCHHHHHHHHHHHCEEEECC
DSAESLLDLLERLRDYKLVLIDTAGMGQRDRALAAQLNWLRAAQQVTSLLVLPANAHFSD
CCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHH
LDEVVRRFAHAKPQGVVLTKLDETGRFGSALSVVVDHQMPITWVTDGQRVPDDLHRANAA
HHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHH
SLVLRLEDLRRAADKPCTPEHNHAVA
HHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]