| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242672
Identifier: 21242672
GI number: 21242672
Start: 2252665
End: 2253498
Strand: Direct
Name: 21242672
Synonym: XAC1928
Alternate gene names: NA
Gene position: 2252665-2253498 (Clockwise)
Preceding gene: 21242671
Following gene: 21242687
Centisome position: 43.53
GC content: 68.23
Gene sequence:
>834_bases ATGACACTGGCCGTACCGGGCTGGCGGCCCGACATGCCGCTGGACGACGATGCGCTGGTGGCCCACCTGCGTGCACGTGC CGAACCGACAAGTTGTCACGCGCTGGCCAACTGGCTGGCTGGCCCGTTGGAGCACGAGACCCGCAAGGCGTACTGGAGCT ATGCACAGGCCGCGCAGCGGTTGGGCTGGCGCGTGCGGCCCACCTTCTCGGCGCACTACCTGCAGCGACAGGCGGAGTAC TACTTGTCGGCTGCGTATGCGCGACCGGCGGCGCCGGCGTTCGCGGTGCCCCCGGCGACGCTGATACTGACCTGGCACCA TCCTGCAGCTCCCGTGCTCATGGCTGGCGTGCGGGCGACAGGTGTTCTGACCTTGATCGCCCAGCGGGCGGAGTGGATGG GCGTGCTCATGGGCGAGGGCAACCTGCTTGCGTTCCGCGATGCCGGAAGCAGCATGCGGCTGCTACGCGCCTTCCGTCAG CAGCGCGTGGTCAGCTGCATGATCGATTTCTGTTACGACGACACCGCGTACGTGGAAGGGCCATTCCTAGGCCATCGGGC GCGCACGCCGCGGGGAGTATTCGCCTTGGCCGAACGCTTCGGTTATGTGGTCTGGCTGGTGTCCTTCGCCGATCATCGGC CCTATGTGGCGGCGCGATTCGCCGCCGGCACGCATGGCGTCGCCGCGCTGGTGGCGCAGGTCAACGCATTGCTGGAAGCA GAGATCCGAAGCGACCCACCGGCCTGGCTGCTGTGGCCGGCGCTGGATCGGCGGGTGACCGATTTCGATTATGGGCAGGC GCGCTCGGGCCGTGCTGCGGTGCCCGCGGCCTGA
Upstream 100 bases:
>100_bases ATCTGTATCCCGAACTGCTGCGCGAGTTCACGGCTGCCGAACGGCCTTTGTTCGCGTACTACGCGCGGCATGCGCAGGGC GATGCGCTCGCCGAGGCGGC
Downstream 100 bases:
>100_bases CCCGCCGCCCGCATGGCCGTGGAGCCGGCGGCGCATCGTGACCATTGGGCTGATGCCAAGAGACTGGTGCGCTTCCGTCG AGAGAGCGCCTGCGTAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MTLAVPGWRPDMPLDDDALVAHLRARAEPTSCHALANWLAGPLEHETRKAYWSYAQAAQRLGWRVRPTFSAHYLQRQAEY YLSAAYARPAAPAFAVPPATLILTWHHPAAPVLMAGVRATGVLTLIAQRAEWMGVLMGEGNLLAFRDAGSSMRLLRAFRQ QRVVSCMIDFCYDDTAYVEGPFLGHRARTPRGVFALAERFGYVVWLVSFADHRPYVAARFAAGTHGVAALVAQVNALLEA EIRSDPPAWLLWPALDRRVTDFDYGQARSGRAAVPAA
Sequences:
>Translated_277_residues MTLAVPGWRPDMPLDDDALVAHLRARAEPTSCHALANWLAGPLEHETRKAYWSYAQAAQRLGWRVRPTFSAHYLQRQAEY YLSAAYARPAAPAFAVPPATLILTWHHPAAPVLMAGVRATGVLTLIAQRAEWMGVLMGEGNLLAFRDAGSSMRLLRAFRQ QRVVSCMIDFCYDDTAYVEGPFLGHRARTPRGVFALAERFGYVVWLVSFADHRPYVAARFAAGTHGVAALVAQVNALLEA EIRSDPPAWLLWPALDRRVTDFDYGQARSGRAAVPAA >Mature_276_residues TLAVPGWRPDMPLDDDALVAHLRARAEPTSCHALANWLAGPLEHETRKAYWSYAQAAQRLGWRVRPTFSAHYLQRQAEYY LSAAYARPAAPAFAVPPATLILTWHHPAAPVLMAGVRATGVLTLIAQRAEWMGVLMGEGNLLAFRDAGSSMRLLRAFRQQ RVVSCMIDFCYDDTAYVEGPFLGHRARTPRGVFALAERFGYVVWLVSFADHRPYVAARFAAGTHGVAALVAQVNALLEAE IRSDPPAWLLWPALDRRVTDFDYGQARSGRAAVPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30609; Mature: 30478
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAVPGWRPDMPLDDDALVAHLRARAEPTSCHALANWLAGPLEHETRKAYWSYAQAAQR CEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LGWRVRPTFSAHYLQRQAEYYLSAAYARPAAPAFAVPPATLILTWHHPAAPVLMAGVRAT CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHH GVLTLIAQRAEWMGVLMGEGNLLAFRDAGSSMRLLRAFRQQRVVSCMIDFCYDDTAYVEG HHHHHHHHHHHHHEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECC PFLGHRARTPRGVFALAERFGYVVWLVSFADHRPYVAARFAAGTHGVAALVAQVNALLEA CCCCCCCCCCHHHHHHHHHHHHHHEEEEHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHH EIRSDPPAWLLWPALDRRVTDFDYGQARSGRAAVPAA HHCCCCCCEEEEHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLAVPGWRPDMPLDDDALVAHLRARAEPTSCHALANWLAGPLEHETRKAYWSYAQAAQR EECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LGWRVRPTFSAHYLQRQAEYYLSAAYARPAAPAFAVPPATLILTWHHPAAPVLMAGVRAT CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHH GVLTLIAQRAEWMGVLMGEGNLLAFRDAGSSMRLLRAFRQQRVVSCMIDFCYDDTAYVEG HHHHHHHHHHHHHEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECC PFLGHRARTPRGVFALAERFGYVVWLVSFADHRPYVAARFAAGTHGVAALVAQVNALLEA CCCCCCCCCCHHHHHHHHHHHHHHEEEEHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHH EIRSDPPAWLLWPALDRRVTDFDYGQARSGRAAVPAA HHCCCCCCEEEEHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA