| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is aslB [C]
Identifier: 21242671
GI number: 21242671
Start: 2251490
End: 2252668
Strand: Direct
Name: aslB [C]
Synonym: XAC1927
Alternate gene names: 21242671
Gene position: 2251490-2252668 (Clockwise)
Preceding gene: 21242670
Following gene: 21242672
Centisome position: 43.5
GC content: 65.99
Gene sequence:
>1179_bases TTGCTGACGCGCGATGGACGCTGCATCGACACCGCGCAGTACCGTCAGGCCCAGTCCCCGACCGCGGTGCTGCTCAAGCT CACCGGTACCTGCAACATCGACTGTGATTATTGTTACGACTACGACGCCGAACGGTTCCGCGCTCAGCAATCTCTCGGCA CCATCCAGACTACGCTGGCGCCGCTGTTGGAGCGCGGTGAGCCGCTGTCGATTGCCTTCCATGGCGGCGAGCCATTGCTG CGGTTCGGTCTCATCCGCCAGGTGGTGCAATGGCTGGAACCGCACCGCGCCCGCGTCGGTTTCTCGTTGCAGACCAACGG GACGCGCTTCACGCCGGAGATTCTCGACTTTCTGGAGCAGCACGACTTTTCGGTCGGCCTGTCGCTCGATGGTCTGGATG AAGCGAGCAATGCATTGCGCCGCACGCGGGGGCCGCGGACGCCGCTGCAGTGCATCCTGGCGCTGATGCGCGAGCGTCCA CAGTTCGTGCGTCAGCGCTGCGGTTTCCTGGCCGTTGCCTCGCGTACCTCGGCACCCGGGCTGCCGGCGTTTGCGCGCTG GCTGCAGGACTTCGGTGTGCAGGGCATGTCGATCACCTTCCTCGACCTGGCCGGCCGCGGCGCCGATCTCGCCGACGAGC GGCTCTCGCCCGAACAGGCCGTGGATCTGTATGCAGGGCTGCTGGAGATGATCCGGAACGGTCAGCTCCATAGCCTGGCG TTGCGCAACCTGGTCGCACGCATGAACAACCTGTTTACACTGCAGTCCCGCGATCTTTGCTATCGGGGGCCCTGCGGCGC GGCCGGCGATTTCCTGGTGCTGGACGCGCAGGGCGGCAAACGGACCTGCGACTGCGTCTATCACCCGTATTTCGAACTGA AGGCAGGCCAGGACGGGGGCGACGCGCCGGCGCGCGCTGCCATCGTCGCGCGTCACAGCTGGCTGCGGCTGCATGGCCAA GGCTGCAGCCGCTGTGCACTGTTCGGACTGTGCGGCGGCACCTGCGTGGCCAAGGCACTGGTGCGCACTGGTCACGACCG TAGCGTGGATCCGGTGGAATGCGCATTGTCGCGGTATCTGTATCCCGAACTGCTGCGCGAGTTCACGGCTGCCGAACGGC CTTTGTTCGCGTACTACGCGCGGCATGCGCAGGGCGATGCGCTCGCCGAGGCGGCATGA
Upstream 100 bases:
>100_bases GTTGACCCGCGACGCCTACCGGCAGCTGCGAGCGGAGCTGCCGCTGGAATTGGACGATTCCATCCAGCTGCAGCCGCTGA CGCAGTTGTGGGAGTCGGCA
Downstream 100 bases:
>100_bases CACTGGCCGTACCGGGCTGGCGGCCCGACATGCCGCTGGACGACGATGCGCTGGTGGCCCACCTGCGTGCACGTGCCGAA CCGACAAGTTGTCACGCGCT
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MLTRDGRCIDTAQYRQAQSPTAVLLKLTGTCNIDCDYCYDYDAERFRAQQSLGTIQTTLAPLLERGEPLSIAFHGGEPLL RFGLIRQVVQWLEPHRARVGFSLQTNGTRFTPEILDFLEQHDFSVGLSLDGLDEASNALRRTRGPRTPLQCILALMRERP QFVRQRCGFLAVASRTSAPGLPAFARWLQDFGVQGMSITFLDLAGRGADLADERLSPEQAVDLYAGLLEMIRNGQLHSLA LRNLVARMNNLFTLQSRDLCYRGPCGAAGDFLVLDAQGGKRTCDCVYHPYFELKAGQDGGDAPARAAIVARHSWLRLHGQ GCSRCALFGLCGGTCVAKALVRTGHDRSVDPVECALSRYLYPELLREFTAAERPLFAYYARHAQGDALAEAA
Sequences:
>Translated_392_residues MLTRDGRCIDTAQYRQAQSPTAVLLKLTGTCNIDCDYCYDYDAERFRAQQSLGTIQTTLAPLLERGEPLSIAFHGGEPLL RFGLIRQVVQWLEPHRARVGFSLQTNGTRFTPEILDFLEQHDFSVGLSLDGLDEASNALRRTRGPRTPLQCILALMRERP QFVRQRCGFLAVASRTSAPGLPAFARWLQDFGVQGMSITFLDLAGRGADLADERLSPEQAVDLYAGLLEMIRNGQLHSLA LRNLVARMNNLFTLQSRDLCYRGPCGAAGDFLVLDAQGGKRTCDCVYHPYFELKAGQDGGDAPARAAIVARHSWLRLHGQ GCSRCALFGLCGGTCVAKALVRTGHDRSVDPVECALSRYLYPELLREFTAAERPLFAYYARHAQGDALAEAA >Mature_392_residues MLTRDGRCIDTAQYRQAQSPTAVLLKLTGTCNIDCDYCYDYDAERFRAQQSLGTIQTTLAPLLERGEPLSIAFHGGEPLL RFGLIRQVVQWLEPHRARVGFSLQTNGTRFTPEILDFLEQHDFSVGLSLDGLDEASNALRRTRGPRTPLQCILALMRERP QFVRQRCGFLAVASRTSAPGLPAFARWLQDFGVQGMSITFLDLAGRGADLADERLSPEQAVDLYAGLLEMIRNGQLHSLA LRNLVARMNNLFTLQSRDLCYRGPCGAAGDFLVLDAQGGKRTCDCVYHPYFELKAGQDGGDAPARAAIVARHSWLRLHGQ GCSRCALFGLCGGTCVAKALVRTGHDRSVDPVECALSRYLYPELLREFTAAERPLFAYYARHAQGDALAEAA
Specific function: Potential Positive Factor For The Regulation Of Arylsulfatase. [C]
COG id: COG0641
COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the radical SAM superfamily. Anaerobic sulfatase-maturating enzyme family [H]
Homologues:
Organism=Escherichia coli, GI48994973, Length=359, Percent_Identity=24.7910863509749, Blast_Score=75, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR000385 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 43303; Mature: 43303
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: PS01305 MOAA_NIFB_PQQE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRDGRCIDTAQYRQAQSPTAVLLKLTGTCNIDCDYCYDYDAERFRAQQSLGTIQTTLA CCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH PLLERGEPLSIAFHGGEPLLRFGLIRQVVQWLEPHRARVGFSLQTNGTRFTPEILDFLEQ HHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCEECHHHHHHHHH HDFSVGLSLDGLDEASNALRRTRGPRTPLQCILALMRERPQFVRQRCGFLAVASRTSAPG CCCEEECEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHCCEEEEECCCCCCC LPAFARWLQDFGVQGMSITFLDLAGRGADLADERLSPEQAVDLYAGLLEMIRNGQLHSLA CHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHH LRNLVARMNNLFTLQSRDLCYRGPCGAAGDFLVLDAQGGKRTCDCVYHPYFELKAGQDGG HHHHHHHHHHEEEEECCCCEECCCCCCCCCEEEEECCCCCCCEEEEECCCEEEECCCCCC DAPARAAIVARHSWLRLHGQGCSRCALFGLCGGTCVAKALVRTGHDRSVDPVECALSRYL CCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH YPELLREFTAAERPLFAYYARHAQGDALAEAA HHHHHHHHHHCCCCHHHHHHHHCCCCHHHCCC >Mature Secondary Structure MLTRDGRCIDTAQYRQAQSPTAVLLKLTGTCNIDCDYCYDYDAERFRAQQSLGTIQTTLA CCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH PLLERGEPLSIAFHGGEPLLRFGLIRQVVQWLEPHRARVGFSLQTNGTRFTPEILDFLEQ HHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCEECHHHHHHHHH HDFSVGLSLDGLDEASNALRRTRGPRTPLQCILALMRERPQFVRQRCGFLAVASRTSAPG CCCEEECEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHCCEEEEECCCCCCC LPAFARWLQDFGVQGMSITFLDLAGRGADLADERLSPEQAVDLYAGLLEMIRNGQLHSLA CHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHH LRNLVARMNNLFTLQSRDLCYRGPCGAAGDFLVLDAQGGKRTCDCVYHPYFELKAGQDGG HHHHHHHHHHEEEEECCCCEECCCCCCCCCEEEEECCCCCCCEEEEECCCEEEECCCCCC DAPARAAIVARHSWLRLHGQGCSRCALFGLCGGTCVAKALVRTGHDRSVDPVECALSRYL CCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH YPELLREFTAAERPLFAYYARHAQGDALAEAA HHHHHHHHHHCCCCHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]