Click here to switch to the map view.

The map label for this gene is 21242662

Identifier: 21242662

GI number: 21242662

Start: 2243874

End: 2245694

Strand: Direct

Name: 21242662

Synonym: XAC1918

Alternate gene names: NA

Gene position: 2243874-2245694 (Clockwise)

Preceding gene: 21242661

Following gene: 21242663

Centisome position: 43.36

GC content: 57.28

Gene sequence:

>1821_bases
ATGCCTATCAACTATCGCGAGCTTACCCAAGAGCAGTACAACGCGCTCACCGGTGATTTGGTCAAGCTCACCGAAAGCTT
GCACGCGCGCTCCCAGGATGTAGGCGATGGTCGGGCCACGATTGGCTATGGATATACATTCAATCGCTCAAACAATGCTG
CGATCTGGGCTGAGTCCGGCATCGAGCTCTCGGATGCACAGCGCAGACAATTGTCAAGGATCGATGCTGCAGCCCCTGGG
GACCGCACAAGGCTGGGTCTGCAGTTTGATCGTACGCTCAATGCTGCAGAAGGAGACCAGCTACTAGCCGCATCAATGCC
TGAGTACGAGCGGCCGATCAATGCGTTGAACATGCCAATGTCGCAAGAGCGGGCGGCGCTTGTGTCGCTCGTCTACAACC
GTGGTGCGGGGTCGTATAACGCCAACATGCAGTCATTTCGGGATGCTGTAGTGGCCGGCGATCGCTCCGAGGCCTGGTTT
GAAATGCGTTACAACGCGTGGGGAAGCAATGCTGCTGCGGAAGCGGGTCTTCGCAAGCGTCGTGTACTGGAGTCCGAACT
CTTTGGCCTCTACAGCGATCCAAACAACGTCACAAGCGACGAGGCGCTGTCTACTTACCAGATGTATCAGCAACATCGCG
AGCGCATCAATCGTGACGAAGCTCGCTGGGGGGTGGATATCGATGGAAATCCTGGGCAACGTAATTTGATTGCGGAGGCG
AATCGGGACTATGCAACCTTGCTGGAAGGGCGAGGCAATGTGCAAACCCTTGCGCAGTCGTTGGACCCAGCGCGTTTGCG
CCTGCTTTCTGATTTGCGGGAGCAGCATCCTGAAATTGCAGATCGCTTGAGCAACGAGGCATTCAACGCAGGCTCGATCC
ATGTAGATGCGGGGCGAGATTCTGCGCGCGTTGCCGTGGATGCCGATCACGCCGCGACAATCGATGCAACCCGCCGGAGG
AACGGCGCAGAGGTCAGCAGTAACGATCTGCTCCTAGGGGGGGGAGGTAATGACACCCTGATTGGCGGGCAGGGCAACGA
CGTGCTGATAGGCGGGCCGGGTCATGACGTGCTGCGTGGTGGGGCTGGTAATGATATCTACATCGTTAACGATGGTGATG
TAGTGCAGGATGCCGACCGAAATGGTCAGATATTTTGGGATGGCCGGCAGCTGACCGGAGGCACCCGGCAAGGGGACGAA
CCAGAAGGTGTCTTTCGTAGTGCGGATGGTCAAACTACTTACCGAATCCAAGGTGCCGATCTATTGATTGGTAACGAACG
AGGGCAATCGGTAACCGTGCAGGATTTTCAGTCAGGAAGCCTAGGCATCGAGCTCGGCCAGGCGCATGTTCAGCGCGAGC
ACGGTGCATCGCAGACTGAGCAGGGTGCGGTCAAAATCTCGGAAAGCGGGAGATATCAGCTGGCATCGCTATCCCAAGAC
CCGCTCCATAGCCAAGCCGAGGATGCAGTTCGCCGCCTTGAGCAAGGCCTCGGTCGAGAGTACGACGACAACAGCGCCCG
CCTTGCGGCAAGCAGTGCATATCTTGCAAAAGAGAACGGGCTGTCGCGAATCGATCATGTCGTACTGAGCGAGAACACAA
AATCCGTGCGACAAGGCGAGAACGTCTTTGTGGTGGAAGGCGCGTTGAACGACCCCGCTCACAAGATGGCGCATATGAAG
ACGAGCGATGCGATTGCGCAGCCTGTCGAGCAATCCTTAGCGCAACTGCAGGCCTTGGGCGAAACGCAGCGCCAACAGCA
ATCCCAGCAGCAGGAGCAGCAGCGAGAGCAATTGATCGCACCTCAACACCGGATGGTGTGA

Upstream 100 bases:

>100_bases
AAAGCGGAGAGTCGTGAGGGTGGGTAATCCGCCTGCAGAGATCTGCAATCAGATCGGGGATTACTCTAACTTAATGTAGT
TTTAGATAAGGAGATCAGAA

Downstream 100 bases:

>100_bases
GGCCTGGCGCAAGTTGTCTGGGGGCTATTGCACAAATCCGCCCCTTTTTACCTTGTAGTGAATAGCGGTTCTGAATCGCG
GTTCCAGGTTCACTTCCACT

Product: hemolysin-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 606; Mature: 605

Protein sequence:

>606_residues
MPINYRELTQEQYNALTGDLVKLTESLHARSQDVGDGRATIGYGYTFNRSNNAAIWAESGIELSDAQRRQLSRIDAAAPG
DRTRLGLQFDRTLNAAEGDQLLAASMPEYERPINALNMPMSQERAALVSLVYNRGAGSYNANMQSFRDAVVAGDRSEAWF
EMRYNAWGSNAAAEAGLRKRRVLESELFGLYSDPNNVTSDEALSTYQMYQQHRERINRDEARWGVDIDGNPGQRNLIAEA
NRDYATLLEGRGNVQTLAQSLDPARLRLLSDLREQHPEIADRLSNEAFNAGSIHVDAGRDSARVAVDADHAATIDATRRR
NGAEVSSNDLLLGGGGNDTLIGGQGNDVLIGGPGHDVLRGGAGNDIYIVNDGDVVQDADRNGQIFWDGRQLTGGTRQGDE
PEGVFRSADGQTTYRIQGADLLIGNERGQSVTVQDFQSGSLGIELGQAHVQREHGASQTEQGAVKISESGRYQLASLSQD
PLHSQAEDAVRRLEQGLGREYDDNSARLAASSAYLAKENGLSRIDHVVLSENTKSVRQGENVFVVEGALNDPAHKMAHMK
TSDAIAQPVEQSLAQLQALGETQRQQQSQQQEQQREQLIAPQHRMV

Sequences:

>Translated_606_residues
MPINYRELTQEQYNALTGDLVKLTESLHARSQDVGDGRATIGYGYTFNRSNNAAIWAESGIELSDAQRRQLSRIDAAAPG
DRTRLGLQFDRTLNAAEGDQLLAASMPEYERPINALNMPMSQERAALVSLVYNRGAGSYNANMQSFRDAVVAGDRSEAWF
EMRYNAWGSNAAAEAGLRKRRVLESELFGLYSDPNNVTSDEALSTYQMYQQHRERINRDEARWGVDIDGNPGQRNLIAEA
NRDYATLLEGRGNVQTLAQSLDPARLRLLSDLREQHPEIADRLSNEAFNAGSIHVDAGRDSARVAVDADHAATIDATRRR
NGAEVSSNDLLLGGGGNDTLIGGQGNDVLIGGPGHDVLRGGAGNDIYIVNDGDVVQDADRNGQIFWDGRQLTGGTRQGDE
PEGVFRSADGQTTYRIQGADLLIGNERGQSVTVQDFQSGSLGIELGQAHVQREHGASQTEQGAVKISESGRYQLASLSQD
PLHSQAEDAVRRLEQGLGREYDDNSARLAASSAYLAKENGLSRIDHVVLSENTKSVRQGENVFVVEGALNDPAHKMAHMK
TSDAIAQPVEQSLAQLQALGETQRQQQSQQQEQQREQLIAPQHRMV
>Mature_605_residues
PINYRELTQEQYNALTGDLVKLTESLHARSQDVGDGRATIGYGYTFNRSNNAAIWAESGIELSDAQRRQLSRIDAAAPGD
RTRLGLQFDRTLNAAEGDQLLAASMPEYERPINALNMPMSQERAALVSLVYNRGAGSYNANMQSFRDAVVAGDRSEAWFE
MRYNAWGSNAAAEAGLRKRRVLESELFGLYSDPNNVTSDEALSTYQMYQQHRERINRDEARWGVDIDGNPGQRNLIAEAN
RDYATLLEGRGNVQTLAQSLDPARLRLLSDLREQHPEIADRLSNEAFNAGSIHVDAGRDSARVAVDADHAATIDATRRRN
GAEVSSNDLLLGGGGNDTLIGGQGNDVLIGGPGHDVLRGGAGNDIYIVNDGDVVQDADRNGQIFWDGRQLTGGTRQGDEP
EGVFRSADGQTTYRIQGADLLIGNERGQSVTVQDFQSGSLGIELGQAHVQREHGASQTEQGAVKISESGRYQLASLSQDP
LHSQAEDAVRRLEQGLGREYDDNSARLAASSAYLAKENGLSRIDHVVLSENTKSVRQGENVFVVEGALNDPAHKMAHMKT
SDAIAQPVEQSLAQLQALGETQRQQQSQQQEQQREQLIAPQHRMV

Specific function: Unknown

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66275; Mature: 66144

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00330 HEMOLYSIN_CALCIUM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPINYRELTQEQYNALTGDLVKLTESLHARSQDVGDGRATIGYGYTFNRSNNAAIWAESG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECEEECCCCCEEEEECCC
IELSDAQRRQLSRIDAAAPGDRTRLGLQFDRTLNAAEGDQLLAASMPEYERPINALNMPM
CCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCHHHCCHHHHCCCC
SQERAALVSLVYNRGAGSYNANMQSFRDAVVAGDRSEAWFEMRYNAWGSNAAAEAGLRKR
CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHH
RVLESELFGLYSDPNNVTSDEALSTYQMYQQHRERINRDEARWGVDIDGNPGQRNLIAEA
HHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHC
NRDYATLLEGRGNVQTLAQSLDPARLRLLSDLREQHPEIADRLSNEAFNAGSIHVDAGRD
CCCHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEECCCC
SARVAVDADHAATIDATRRRNGAEVSSNDLLLGGGGNDTLIGGQGNDVLIGGPGHDVLRG
CCEEEEECCCCEECHHHHCCCCCCCCCCCEEEECCCCCCEECCCCCEEEEECCCHHHHCC
GAGNDIYIVNDGDVVQDADRNGQIFWDGRQLTGGTRQGDEPEGVFRSADGQTTYRIQGAD
CCCCEEEEECCCCEEECCCCCCCEEECCCEECCCCCCCCCCCCCEECCCCCEEEEEECCE
LLIGNERGQSVTVQDFQSGSLGIELGQAHVQREHGASQTEQGAVKISESGRYQLASLSQD
EEEECCCCCEEEEEECCCCCCEEEHHHHHHHHHCCCCCCCCCCEEEECCCCEEEECCCCC
PLHSQAEDAVRRLEQGLGREYDDNSARLAASSAYLAKENGLSRIDHVVLSENTKSVRQGE
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHCCHHHHHHEEECCCCHHHHCCC
NVFVVEGALNDPAHKMAHMKTSDAIAQPVEQSLAQLQALGETQRQQQSQQQEQQREQLIA
CEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PQHRMV
CHHCCC
>Mature Secondary Structure 
PINYRELTQEQYNALTGDLVKLTESLHARSQDVGDGRATIGYGYTFNRSNNAAIWAESG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECEEECCCCCEEEEECCC
IELSDAQRRQLSRIDAAAPGDRTRLGLQFDRTLNAAEGDQLLAASMPEYERPINALNMPM
CCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCHHHCCHHHHCCCC
SQERAALVSLVYNRGAGSYNANMQSFRDAVVAGDRSEAWFEMRYNAWGSNAAAEAGLRKR
CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHH
RVLESELFGLYSDPNNVTSDEALSTYQMYQQHRERINRDEARWGVDIDGNPGQRNLIAEA
HHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHC
NRDYATLLEGRGNVQTLAQSLDPARLRLLSDLREQHPEIADRLSNEAFNAGSIHVDAGRD
CCCHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEECCCC
SARVAVDADHAATIDATRRRNGAEVSSNDLLLGGGGNDTLIGGQGNDVLIGGPGHDVLRG
CCEEEEECCCCEECHHHHCCCCCCCCCCCEEEECCCCCCEECCCCCEEEEECCCHHHHCC
GAGNDIYIVNDGDVVQDADRNGQIFWDGRQLTGGTRQGDEPEGVFRSADGQTTYRIQGAD
CCCCEEEEECCCCEEECCCCCCCEEECCCEECCCCCCCCCCCCCEECCCCCEEEEEECCE
LLIGNERGQSVTVQDFQSGSLGIELGQAHVQREHGASQTEQGAVKISESGRYQLASLSQD
EEEECCCCCEEEEEECCCCCCEEEHHHHHHHHHCCCCCCCCCCEEEECCCCEEEECCCCC
PLHSQAEDAVRRLEQGLGREYDDNSARLAASSAYLAKENGLSRIDHVVLSENTKSVRQGE
CCHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHCCHHHHHHEEECCCCHHHHCCC
NVFVVEGALNDPAHKMAHMKTSDAIAQPVEQSLAQLQALGETQRQQQSQQQEQQREQLIA
CEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PQHRMV
CHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA