| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242661
Identifier: 21242661
GI number: 21242661
Start: 2243064
End: 2243852
Strand: Direct
Name: 21242661
Synonym: XAC1917
Alternate gene names: NA
Gene position: 2243064-2243852 (Clockwise)
Preceding gene: 21242660
Following gene: 21242662
Centisome position: 43.34
GC content: 55.51
Gene sequence:
>789_bases GTGGATTACGAGGAATCAGGCGATGAAGAAGTCCCGTTTCACCGAGGAGTAGATTGCGTACGCGCTCAAGCAAGCCGAGC TTGGGATGACAGTCGGAGATCTGACGCAAGCTGGGTATCGCGGAGGGAACGTTCTATGTGTGGCGCAAGAACTACGGCGG CGGGGCCCGTCCGAGCTCAAGCGCCTGTGGTTGCTGGAAGAGGAAAGCCGCAAGCTAAAGCAGCTGGTGGCCGACCTGAG TCCGGACAAGGCGATGCCCCAGAAGTGGTCAATGATGTTATTCACACGCAAGGAGTTTTCATGAAAATAAAGTCTGTTGG CTGCGTGGCGCTTGCGCTCTTCTTCATCACAGGATGTACGGTGGTATCCGCGGGCGCGGACATGCGTGCTCCATCCGGAG CCTCGCTTTGTGAGGAGTCCCGTGGTTGGGAGGGCGCAGGTTCGACGCAAGCCATACAAGTCAATCCACAGGTCTCCGAA GATGATAGCGGGCGTTCTTATCGCTTTGATCTTGGCGGTCGAGGCGGGTTGAAGCGCTTGGGTGCTAGTTGTGGATGGGG CTCATATGCGGAATGTAGCTTTGAGGCAGTCCGGTCAGATGGAGCAAGTTATCGCTTCTCAGAGATGTCCACGTTTGGCC TCTGGGAGACGAAAGAAGGGTTGTATCTTGTTTACCGTATCGTCGCGCCAAAGGAAAAGGCCGCAGAAGCAAAGCGGAGA GTCGTGAGGGTGGGTAATCCGCCTGCAGAGATCTGCAATCAGATCGGGGATTACTCTAACTTAATGTAG
Upstream 100 bases:
>100_bases TAAAAACGTGGGGATACCTAAGGGTCTACATCCGTTAAGTGACCCACCCCCAATAAACCGGACCACCGTAAAGTAGAGAC TTCGTCCCGCGTGGGCTCCC
Downstream 100 bases:
>100_bases TTTTAGATAAGGAGATCAGAAATGCCTATCAACTATCGCGAGCTTACCCAAGAGCAGTACAACGCGCTCACCGGTGATTT GGTCAAGCTCACCGAAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MDYEESGDEEVPFHRGVDCVRAQASRAWDDSRRSDASWVSRRERSMCGARTTAAGPVRAQAPVVAGRGKPQAKAAGGRPE SGQGDAPEVVNDVIHTQGVFMKIKSVGCVALALFFITGCTVVSAGADMRAPSGASLCEESRGWEGAGSTQAIQVNPQVSE DDSGRSYRFDLGGRGGLKRLGASCGWGSYAECSFEAVRSDGASYRFSEMSTFGLWETKEGLYLVYRIVAPKEKAAEAKRR VVRVGNPPAEICNQIGDYSNLM
Sequences:
>Translated_262_residues MDYEESGDEEVPFHRGVDCVRAQASRAWDDSRRSDASWVSRRERSMCGARTTAAGPVRAQAPVVAGRGKPQAKAAGGRPE SGQGDAPEVVNDVIHTQGVFMKIKSVGCVALALFFITGCTVVSAGADMRAPSGASLCEESRGWEGAGSTQAIQVNPQVSE DDSGRSYRFDLGGRGGLKRLGASCGWGSYAECSFEAVRSDGASYRFSEMSTFGLWETKEGLYLVYRIVAPKEKAAEAKRR VVRVGNPPAEICNQIGDYSNLM >Mature_262_residues MDYEESGDEEVPFHRGVDCVRAQASRAWDDSRRSDASWVSRRERSMCGARTTAAGPVRAQAPVVAGRGKPQAKAAGGRPE SGQGDAPEVVNDVIHTQGVFMKIKSVGCVALALFFITGCTVVSAGADMRAPSGASLCEESRGWEGAGSTQAIQVNPQVSE DDSGRSYRFDLGGRGGLKRLGASCGWGSYAECSFEAVRSDGASYRFSEMSTFGLWETKEGLYLVYRIVAPKEKAAEAKRR VVRVGNPPAEICNQIGDYSNLM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28076; Mature: 28076
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYEESGDEEVPFHRGVDCVRAQASRAWDDSRRSDASWVSRRERSMCGARTTAAGPVRAQ CCCCCCCCCCCCHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC APVVAGRGKPQAKAAGGRPESGQGDAPEVVNDVIHTQGVFMKIKSVGCVALALFFITGCT CCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VVSAGADMRAPSGASLCEESRGWEGAGSTQAIQVNPQVSEDDSGRSYRFDLGGRGGLKRL HEECCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCHHHH GASCGWGSYAECSFEAVRSDGASYRFSEMSTFGLWETKEGLYLVYRIVAPKEKAAEAKRR CCCCCCCCCCHHHHHHHHCCCCCEEHHHHHHCCCEECCCCEEEEEEEECCCHHHHHHHHH VVRVGNPPAEICNQIGDYSNLM EEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MDYEESGDEEVPFHRGVDCVRAQASRAWDDSRRSDASWVSRRERSMCGARTTAAGPVRAQ CCCCCCCCCCCCHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC APVVAGRGKPQAKAAGGRPESGQGDAPEVVNDVIHTQGVFMKIKSVGCVALALFFITGCT CCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VVSAGADMRAPSGASLCEESRGWEGAGSTQAIQVNPQVSEDDSGRSYRFDLGGRGGLKRL HEECCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCHHHH GASCGWGSYAECSFEAVRSDGASYRFSEMSTFGLWETKEGLYLVYRIVAPKEKAAEAKRR CCCCCCCCCCHHHHHHHHCCCCCEEHHHHHHCCCEECCCCEEEEEEEECCCHHHHHHHHH VVRVGNPPAEICNQIGDYSNLM EEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA