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The map label for this gene is tsr [H]

Identifier: 21242646

GI number: 21242646

Start: 2223874

End: 2225985

Strand: Reverse

Name: tsr [H]

Synonym: XAC1902

Alternate gene names: 21242646

Gene position: 2225985-2223874 (Counterclockwise)

Preceding gene: 21242647

Following gene: 77748620

Centisome position: 43.01

GC content: 64.68

Gene sequence:

>2112_bases
ATGCGCGCATTGCTCGGCGAATTCCGCACCTACGAACTCGCTCAGCTGGCGCACGCCGACGATCCGAAGGCGGTGCAGAA
TTATTTCGAACGCATGGACAAGGCGCGCGCCGACGTCGCGACGGCGCAGGACGCCTACGCCAAGACCACCACGGCAGGTA
GAGAGACCGAGTTGTACGACGAGGTCAAACTGAAACTGTCCGATTACTACAAGGCCAATGCTGCGCTCAGCGCCGCGGTG
CGTGCCGGCGATCTGGTCACTGCCAATCGCGTTTCCGACGAGCAATCGCGTCCGGCGCGGCGCGACCTGTTCGCAAAATT
GGTGGAGCTGACCAAGTTCAACGTTGCCCACATGGACAGCGAGATCGCGCAGGCCGAGGCAACCTACCGGCGTTCGGTGC
ACGTCATGCTCGTGGCGATGGCGCTGTTCGTGCTGCTGGCTGCATTTTCCGGTTGGTTCATCGCCCGCAGCATCGCCGGC
CCGCTCGGTCGCGCCACGCGGGTGGCCAGTGCCATCGCACAGGGCAAACTGGATAACGCCATCCACGTCGACAGCCGCGA
CGAAGCCGGGCAACTGCTGCACAGCATGGAAGGCATGCAGCGGCAACTGCAGGCCGTGCTCGCAGCGCAATCGGAAATGG
CCAAGCGCCACGATGCCGGCCAAATCAGCTATCGCATGGAACACGATGCGTTTCCAGGCGACTACGGCACCATGGTGCGC
GACACCAACAGCCTGGTCGGCTCGCATATCGCAGTCAAGATGAAACTCGCGCAGATCATGTCGCACTATGCGATCGGCGA
CTTCAGTCAGGACATGGACCGCCTGCCCGGGGAGAAGGCCGTGCTCAGTTCCACCATGGATACCGTCAAGGCCAACCTGT
CGGCGATGAACGGCGAGATCAAGCTGTTGGCGCAGGCCGCCGCCAACGGCGACTTCAGCGTGCGCGGCGACACGCAGCGC
TTCCAGTACGATTTCCAGGCGATGGTGGAGAGCCTCAACCAGCTGATGGCGACCGCCGATGCCAACCTCGGCTCGCTGTC
GAAGCTGTTGCAGGCCATCGCCGCGGGCGATCTCACCGAGCGCATGCAAGGCCAGTTCAATGGCGTGTTCGCCCAGATGC
GCGACGATGCCAATGCCACCACGGCGCAACTTGCCGATATCGTTGGGCGCATCCAGCACGCCACCCTGTCGATCAATACC
GCGGCCAGCGAGATCGCGGCCGGCAACAACGATCTGTCGCAGCGCACCGAGCAGCAGGCCGCCAACCTGGAAGAAACCGC
CGCATCGATGGAGGAACTCACCTCCACCGTACGCCAGAACGCCGAGCATGCGCGCCAGGCCAACCAACTCGCCATCGGTG
CGGCCACGGTTGCCTCGCAAGGCGGCAGCGTGGTGTCGCAGGTGGTGACCACGATGTCCGGCATCGAGGTGTCGTCGAAG
AAGATCGCCGACATCATCAGCGTGATCGACGGCATCGCCTTCCAGACCAACATCCTGGCCTTGAACGCTGCGGTGGAAGC
GGCGCGTGCCGGCGAACAGGGCCGTGGTTTCGCCGTGGTTGCCTCGGAAGTGCGCACGCTCGCCCAGCGTTCGGCCAATG
CAGCCAAGGAGATCAAGCACCTCATCGACGATTCGGTGAGCAAGGTCGCCGAAGGCTCGGTCCTGGTGGATCGGGCCGGC
AAGACCATGGCCGACATCGTCGCCAGCGTGCAGCGCGTCACCGACATCATGGGCGAGATTTCTGCCGCCTCGCAGGAACA
GTCGGCCGGGATCGAGCAGGTCAACCTCACCGTGACGCAGATGGACGAAGCCACCCAGCAGAACGCCGCGCTGGTGGAAG
AAGCCACCGCCGCGGCACGTGCGATGGAAGAGCAAGCCGGTCAGCTGTCCGATGCGGTGTCGATCTTCAAGGTCCAGCAG
GTCGCCGCCGTGGCGCCTGCGGCCAAGCGCCCTGCGCCGCTGCGCCTGGCCGCCGCAAAGCCAGGCGCTACCAAACCGAC
CACGACCAAGCGCGCACCCGCACCGGCCGGTGTCGCGGCCAAAGCCACAGCCACGCCACGCCCGGTGGCTGCCACAGCTG
GCAACAGCGAGTCGGACTGGCAGGAGTTCTAA

Upstream 100 bases:

>100_bases
GAGCCTGGGCGGGTTTGCGCTTGCGCGCATGCAATCGAGCGCGCATCTGTTGCGCGAGATCGGCACCGTGTGGGCACCGG
CCGTGCAGCAACTGAGCGAA

Downstream 100 bases:

>100_bases
GCGCACTGCAGCTGCACGGCTGCCGGATCAGGCGGCACGTGCACCCCAAGCCCCGGCAGCAATGTCGGGGCTTTTTTGGC
GAGAAACTCTGCTTAAGGCG

Product: chemotaxis protein

Products: NA

Alternate protein names: MCP-I; Serine chemoreceptor protein [H]

Number of amino acids: Translated: 703; Mature: 703

Protein sequence:

>703_residues
MRALLGEFRTYELAQLAHADDPKAVQNYFERMDKARADVATAQDAYAKTTTAGRETELYDEVKLKLSDYYKANAALSAAV
RAGDLVTANRVSDEQSRPARRDLFAKLVELTKFNVAHMDSEIAQAEATYRRSVHVMLVAMALFVLLAAFSGWFIARSIAG
PLGRATRVASAIAQGKLDNAIHVDSRDEAGQLLHSMEGMQRQLQAVLAAQSEMAKRHDAGQISYRMEHDAFPGDYGTMVR
DTNSLVGSHIAVKMKLAQIMSHYAIGDFSQDMDRLPGEKAVLSSTMDTVKANLSAMNGEIKLLAQAAANGDFSVRGDTQR
FQYDFQAMVESLNQLMATADANLGSLSKLLQAIAAGDLTERMQGQFNGVFAQMRDDANATTAQLADIVGRIQHATLSINT
AASEIAAGNNDLSQRTEQQAANLEETAASMEELTSTVRQNAEHARQANQLAIGAATVASQGGSVVSQVVTTMSGIEVSSK
KIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSANAAKEIKHLIDDSVSKVAEGSVLVDRAG
KTMADIVASVQRVTDIMGEISAASQEQSAGIEQVNLTVTQMDEATQQNAALVEEATAAARAMEEQAGQLSDAVSIFKVQQ
VAAVAPAAKRPAPLRLAAAKPGATKPTTTKRAPAPAGVAAKATATPRPVAATAGNSESDWQEF

Sequences:

>Translated_703_residues
MRALLGEFRTYELAQLAHADDPKAVQNYFERMDKARADVATAQDAYAKTTTAGRETELYDEVKLKLSDYYKANAALSAAV
RAGDLVTANRVSDEQSRPARRDLFAKLVELTKFNVAHMDSEIAQAEATYRRSVHVMLVAMALFVLLAAFSGWFIARSIAG
PLGRATRVASAIAQGKLDNAIHVDSRDEAGQLLHSMEGMQRQLQAVLAAQSEMAKRHDAGQISYRMEHDAFPGDYGTMVR
DTNSLVGSHIAVKMKLAQIMSHYAIGDFSQDMDRLPGEKAVLSSTMDTVKANLSAMNGEIKLLAQAAANGDFSVRGDTQR
FQYDFQAMVESLNQLMATADANLGSLSKLLQAIAAGDLTERMQGQFNGVFAQMRDDANATTAQLADIVGRIQHATLSINT
AASEIAAGNNDLSQRTEQQAANLEETAASMEELTSTVRQNAEHARQANQLAIGAATVASQGGSVVSQVVTTMSGIEVSSK
KIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSANAAKEIKHLIDDSVSKVAEGSVLVDRAG
KTMADIVASVQRVTDIMGEISAASQEQSAGIEQVNLTVTQMDEATQQNAALVEEATAAARAMEEQAGQLSDAVSIFKVQQ
VAAVAPAAKRPAPLRLAAAKPGATKPTTTKRAPAPAGVAAKATATPRPVAATAGNSESDWQEF
>Mature_703_residues
MRALLGEFRTYELAQLAHADDPKAVQNYFERMDKARADVATAQDAYAKTTTAGRETELYDEVKLKLSDYYKANAALSAAV
RAGDLVTANRVSDEQSRPARRDLFAKLVELTKFNVAHMDSEIAQAEATYRRSVHVMLVAMALFVLLAAFSGWFIARSIAG
PLGRATRVASAIAQGKLDNAIHVDSRDEAGQLLHSMEGMQRQLQAVLAAQSEMAKRHDAGQISYRMEHDAFPGDYGTMVR
DTNSLVGSHIAVKMKLAQIMSHYAIGDFSQDMDRLPGEKAVLSSTMDTVKANLSAMNGEIKLLAQAAANGDFSVRGDTQR
FQYDFQAMVESLNQLMATADANLGSLSKLLQAIAAGDLTERMQGQFNGVFAQMRDDANATTAQLADIVGRIQHATLSINT
AASEIAAGNNDLSQRTEQQAANLEETAASMEELTSTVRQNAEHARQANQLAIGAATVASQGGSVVSQVVTTMSGIEVSSK
KIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSANAAKEIKHLIDDSVSKVAEGSVLVDRAG
KTMADIVASVQRVTDIMGEISAASQEQSAGIEQVNLTVTQMDEATQQNAALVEEATAAARAMEEQAGQLSDAVSIFKVQQ
VAAVAPAAKRPAPLRLAAAKPGATKPTTTKRAPAPAGVAAKATATPRPVAATAGNSESDWQEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=309, Percent_Identity=61.4886731391586, Blast_Score=313, Evalue=2e-86,
Organism=Escherichia coli, GI1788195, Length=281, Percent_Identity=64.4128113879004, Blast_Score=301, Evalue=8e-83,
Organism=Escherichia coli, GI1788194, Length=293, Percent_Identity=57.679180887372, Blast_Score=292, Evalue=5e-80,
Organism=Escherichia coli, GI1787690, Length=291, Percent_Identity=55.6701030927835, Blast_Score=276, Evalue=2e-75,
Organism=Escherichia coli, GI1789453, Length=240, Percent_Identity=46.25, Blast_Score=204, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 74685; Mature: 74685

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALLGEFRTYELAQLAHADDPKAVQNYFERMDKARADVATAQDAYAKTTTAGRETELYD
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
EVKLKLSDYYKANAALSAAVRAGDLVTANRVSDEQSRPARRDLFAKLVELTKFNVAHMDS
HHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH
EIAQAEATYRRSVHVMLVAMALFVLLAAFSGWFIARSIAGPLGRATRVASAIAQGKLDNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC
IHVDSRDEAGQLLHSMEGMQRQLQAVLAAQSEMAKRHDAGQISYRMEHDAFPGDYGTMVR
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHH
DTNSLVGSHIAVKMKLAQIMSHYAIGDFSQDMDRLPGEKAVLSSTMDTVKANLSAMNGEI
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHH
KLLAQAAANGDFSVRGDTQRFQYDFQAMVESLNQLMATADANLGSLSKLLQAIAAGDLTE
EEEEHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHH
RMQGQFNGVFAQMRDDANATTAQLADIVGRIQHATLSINTAASEIAAGNNDLSQRTEQQA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEHHHHHHHCCCCHHHHHHHHHH
ANLEETAASMEELTSTVRQNAEHARQANQLAIGAATVASQGGSVVSQVVTTMSGIEVSSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHH
KIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSANAAKEIKH
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
LIDDSVSKVAEGSVLVDRAGKTMADIVASVQRVTDIMGEISAASQEQSAGIEQVNLTVTQ
HHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEEH
MDEATQQNAALVEEATAAARAMEEQAGQLSDAVSIFKVQQVAAVAPAAKRPAPLRLAAAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
PGATKPTTTKRAPAPAGVAAKATATPRPVAATAGNSESDWQEF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHCC
>Mature Secondary Structure
MRALLGEFRTYELAQLAHADDPKAVQNYFERMDKARADVATAQDAYAKTTTAGRETELYD
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
EVKLKLSDYYKANAALSAAVRAGDLVTANRVSDEQSRPARRDLFAKLVELTKFNVAHMDS
HHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH
EIAQAEATYRRSVHVMLVAMALFVLLAAFSGWFIARSIAGPLGRATRVASAIAQGKLDNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC
IHVDSRDEAGQLLHSMEGMQRQLQAVLAAQSEMAKRHDAGQISYRMEHDAFPGDYGTMVR
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHH
DTNSLVGSHIAVKMKLAQIMSHYAIGDFSQDMDRLPGEKAVLSSTMDTVKANLSAMNGEI
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHH
KLLAQAAANGDFSVRGDTQRFQYDFQAMVESLNQLMATADANLGSLSKLLQAIAAGDLTE
EEEEHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHH
RMQGQFNGVFAQMRDDANATTAQLADIVGRIQHATLSINTAASEIAAGNNDLSQRTEQQA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEHHHHHHHCCCCHHHHHHHHHH
ANLEETAASMEELTSTVRQNAEHARQANQLAIGAATVASQGGSVVSQVVTTMSGIEVSSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHH
KIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSANAAKEIKH
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
LIDDSVSKVAEGSVLVDRAGKTMADIVASVQRVTDIMGEISAASQEQSAGIEQVNLTVTQ
HHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEEH
MDEATQQNAALVEEATAAARAMEEQAGQLSDAVSIFKVQQVAAVAPAAKRPAPLRLAAAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
PGATKPTTTKRAPAPAGVAAKATATPRPVAATAGNSESDWQEF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6402709; 7610040; 9278503; 8384293; 6213619; 2033064; 10466731 [H]