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The map label for this gene is rpfD [C]

Identifier: 21242618

GI number: 21242618

Start: 2174014

End: 2174928

Strand: Direct

Name: rpfD [C]

Synonym: XAC1874

Alternate gene names: 21242618

Gene position: 2174014-2174928 (Clockwise)

Preceding gene: 21242614

Following gene: 21242619

Centisome position: 42.01

GC content: 68.2

Gene sequence:

>915_bases
ATGCAATCGATCGGGGCGCGCCCGCCAATCCTCCACGACAGTGCCGGCCGCGCTGCGACACGCTGGGCGGTGGTGATCTG
GTCGCTGGTGTTCTATGTGAGCGCGCTGGGCAACGTCTGGACCGCCTGGCTTGCCGCGCGCCGCGATGGCCAGCCCATCG
TGGTGTGGCAGGTGCTGAGCTGGGAGCTGAGCAGCGCCACCGCAGCGCTGCTGCTGTTGCCGGCGGTGGTGTGGCTCTGC
GCACGCTGGCCGTTGCATGCCGATGTCTGGGTGCGACGCCTGCCGGCGTATGTGATGGCTGCACTGGGCTGGTGGCTGCT
GCATGTCGCCGGCATGGTGGTGCTGCGCATGCTGGTCTATGCCCTGGCCGGCGCACACTACGACTTCGGCGGCTGGCTGC
AGTGGGTCTACGAGCTGTCCAAGGACCTGCGCACCTTTGCACTGCTGGTGGCGGTGCAGCACGCACTGGCCTGGTACGCA
CGGCGTCGTCAGGGCGAGGCGCACCTGCTCGCCGCACCTGACGAAGGCCCGCCAGTGGAGCCGCTGGATCGCCCGGAGCG
TTTTCTGGTGCGCAAGCTGGGACGCGATTTCCTGGTCGCGACCGCCGATATCGAGTGGATCCAGGCCTCGGGCAACTACG
TCAACCTGCACGTGCGCGGTCACGATTACCCGTTGCGCAGCACCATGGCGGCGATCGAGGCGAAGCTGGACCCGGCCGTG
TTCGTGCGCATCCACCGCAGCTATCTGGTCAATCTGGGGCAGGTGCAGGCGATTGAGCCGTCCGATTCCGGCGACGCACG
CGTGCATCTGCGCGATGCCAGCGTGCTGCCGTGCAGTCGCAGCCACCTGGCCGGTTTGCGTACCCATGCCGGGCGGGGCG
CCGCTGCGCCGAGATCCGACGCACTGGTGGCATAA

Upstream 100 bases:

>100_bases
GTTGTGCCCACCCAGGGACGAATAGGGCCGGCAGGGATGGCGGTTTCGCCTTGTAGCGCAGGCCTCTATGATCGGCAGCT
GCCAACTGCGGACGTGTGCA

Downstream 100 bases:

>100_bases
CCCCCGCTGGGTGCCTGGGGTGACCAGCCTCTGGTCCCAAATTCGTCCCTGGCCCAGGCGCCGCAAGGTCGCAACTGCTG
CGACACCGACACGCCATGGT

Product: regulatory protein

Products: NA

Alternate protein names: Regulatory Protein; LytTR Family Two Component Transcriptional Regulator; LytR/AlgR Family Transcriptional Regulator; Two-Component Response Regulator; Response Regulator; LytT Family Two-Component Response Regulator; Response Regulator In Two-Component Regulatory System; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; AlgR/AgrA/LytR Family Regulatory Protein; Two Component Transcriptional Regulator Lyttr Family; Two-Component System Response Regulator Protein; Transmembrane Sensory Transduction Protein LytT

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MQSIGARPPILHDSAGRAATRWAVVIWSLVFYVSALGNVWTAWLAARRDGQPIVVWQVLSWELSSATAALLLLPAVVWLC
ARWPLHADVWVRRLPAYVMAALGWWLLHVAGMVVLRMLVYALAGAHYDFGGWLQWVYELSKDLRTFALLVAVQHALAWYA
RRRQGEAHLLAAPDEGPPVEPLDRPERFLVRKLGRDFLVATADIEWIQASGNYVNLHVRGHDYPLRSTMAAIEAKLDPAV
FVRIHRSYLVNLGQVQAIEPSDSGDARVHLRDASVLPCSRSHLAGLRTHAGRGAAAPRSDALVA

Sequences:

>Translated_304_residues
MQSIGARPPILHDSAGRAATRWAVVIWSLVFYVSALGNVWTAWLAARRDGQPIVVWQVLSWELSSATAALLLLPAVVWLC
ARWPLHADVWVRRLPAYVMAALGWWLLHVAGMVVLRMLVYALAGAHYDFGGWLQWVYELSKDLRTFALLVAVQHALAWYA
RRRQGEAHLLAAPDEGPPVEPLDRPERFLVRKLGRDFLVATADIEWIQASGNYVNLHVRGHDYPLRSTMAAIEAKLDPAV
FVRIHRSYLVNLGQVQAIEPSDSGDARVHLRDASVLPCSRSHLAGLRTHAGRGAAAPRSDALVA
>Mature_304_residues
MQSIGARPPILHDSAGRAATRWAVVIWSLVFYVSALGNVWTAWLAARRDGQPIVVWQVLSWELSSATAALLLLPAVVWLC
ARWPLHADVWVRRLPAYVMAALGWWLLHVAGMVVLRMLVYALAGAHYDFGGWLQWVYELSKDLRTFALLVAVQHALAWYA
RRRQGEAHLLAAPDEGPPVEPLDRPERFLVRKLGRDFLVATADIEWIQASGNYVNLHVRGHDYPLRSTMAAIEAKLDPAV
FVRIHRSYLVNLGQVQAIEPSDSGDARVHLRDASVLPCSRSHLAGLRTHAGRGAAAPRSDALVA

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33767; Mature: 33767

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSIGARPPILHDSAGRAATRWAVVIWSLVFYVSALGNVWTAWLAARRDGQPIVVWQVLS
CCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEH
WELSSATAALLLLPAVVWLCARWPLHADVWVRRLPAYVMAALGWWLLHVAGMVVLRMLVY
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAGAHYDFGGWLQWVYELSKDLRTFALLVAVQHALAWYARRRQGEAHLLAAPDEGPPVE
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
PLDRPERFLVRKLGRDFLVATADIEWIQASGNYVNLHVRGHDYPLRSTMAAIEAKLDPAV
CCCCHHHHHHHHCCCCEEEEECCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCHHH
FVRIHRSYLVNLGQVQAIEPSDSGDARVHLRDASVLPCSRSHLAGLRTHAGRGAAAPRSD
HHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCC
ALVA
CCCC
>Mature Secondary Structure
MQSIGARPPILHDSAGRAATRWAVVIWSLVFYVSALGNVWTAWLAARRDGQPIVVWQVLS
CCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEH
WELSSATAALLLLPAVVWLCARWPLHADVWVRRLPAYVMAALGWWLLHVAGMVVLRMLVY
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAGAHYDFGGWLQWVYELSKDLRTFALLVAVQHALAWYARRRQGEAHLLAAPDEGPPVE
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
PLDRPERFLVRKLGRDFLVATADIEWIQASGNYVNLHVRGHDYPLRSTMAAIEAKLDPAV
CCCCHHHHHHHHCCCCEEEEECCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCHHH
FVRIHRSYLVNLGQVQAIEPSDSGDARVHLRDASVLPCSRSHLAGLRTHAGRGAAAPRSD
HHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCC
ALVA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA