| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242617
Identifier: 21242617
GI number: 21242617
Start: 2172604
End: 2173851
Strand: Reverse
Name: 21242617
Synonym: XAC1873
Alternate gene names: NA
Gene position: 2173851-2172604 (Counterclockwise)
Preceding gene: 21242623
Following gene: 21242616
Centisome position: 42.0
GC content: 65.54
Gene sequence:
>1248_bases ATGCAGCCACTCCTTCACCAGCCACCGACCATGACCGAGCGCCGCCACGATATCGATGCCTTGCGCGTTTTCGCCTTCGC CCTGCTGATCCTCTACCACGTGGGCATGGCCTATGTGGCCGACTGGGGGTTCCACCTCAAGAGCGTGCACACGGCCGAGT GGTTGCAGTGGCCGATGATCGTGCTCAACCGGTGGCGAATGCCGTTGCTGTTCATGATCTCCGGCATTGCGATCGGATTG TCGCAGCCGCAAGCCGCGCCCTGGCGCTTCGCGCTGCGTCGCTGCGGGCGGTTGCTGCCGCCCTTGCTGTTCGGCATGTT CGTGGTGGTGGCGGTGCAGGCCTACTGCCAGGGCGTGAGCAACGGCAAGGTCGCCACCGGGTTCGGCAGCTTCCTGCTGC GCTACTGGCAGGTGCGCCCGTGGCCGGCCGGCAGTTTCGATGGTTGGGAACACGGCATCACCTGGAATCACCTGTGGTAC CTGGCCTACCTGCTGCCCTACACCGTGGCGTTGATGGCGCTGGTGTCGCTGGCCAGGCTGGTGCGGCTGCCGGCCTTACC ACCGCTTCCCGCCGCCGTGGCGGTGCCGGCCCTGCTGGTGTTGCCGATCCTGCGGGAGGCGTTCTGCGTGATGTGGGTGA TGCCGCGGCATCCGCCGACCCATGCGTTGGTTGGCGACTGGTTCGTGCATGCCGAATCGTTCCCGCTCTTTCTCTTGGGC TATCTGCTGGCACGCAACCAACGCTTCTGGGCCTGGACCGTGCAACTGCGCTGGCCCACCCTGGGCTGCGCCCTGCTGGC GATCGGCACCGAACTATCGATCCGCTACGTCGGCAGGCACCTGCCTCCCGCACAACTCGACGCGCTGCTGGCAAGCCTGC CGTGGGACCGCATCGAACGCATCGCGCGTTCCGCCTATACCTGGCTCGCGCTGCTGACGCTTCTTGGCTGGGCCAGGCAC CGCTTGAACCGACCGTACCGCTGGCTGCCGTATTGCACCGAAGCGGTGTTTCCCTGGTACATCCTGCATCAGAGCCTGAT CATCGTGGCACTGTACTGGCTGGCCCCGCTACATCTGAATGCCTGGCTGGAGCCGGCGCTGGTGATCGCCGCAACCGTGG TCGGCTGCCTGGCACTGCATGAGTACGTGATCCGCCGGGTGGGTTGGCTGCGGCCGTTGTTTGGATTGCATCGCTCAGGC GCAAACGGCGCTCAACCGTTGCTGGCGACGGTGAAGAGGTCGACTTGA
Upstream 100 bases:
>100_bases ATCCCTGCCGGCCCTATTCGTCCCTGGGTGGGCACAACTGGTCACCGCGGACCGGGCTTTCCGCCCCTGACACCACTGCT GGAGCGGGGCCGCGGGCAGG
Downstream 100 bases:
>100_bases CCGAATCCCCTGCAATTCCGGCTCAGACGTTGGCGAAGGAGATTGATCCAGCCATAGTTAGAGGTCTCCGGGCACACTAG CCCCCTAGGAGACAAACGAT
Product: inner membrane protein
Products: NA
Alternate protein names: Inner Membrane Protein; Acetyltransferase; Transmembrane Protein; Acyltransferase Putative; 3 4-Dihydroxy-2-Butanone 4-Phosphate Synthase
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MQPLLHQPPTMTERRHDIDALRVFAFALLILYHVGMAYVADWGFHLKSVHTAEWLQWPMIVLNRWRMPLLFMISGIAIGL SQPQAAPWRFALRRCGRLLPPLLFGMFVVVAVQAYCQGVSNGKVATGFGSFLLRYWQVRPWPAGSFDGWEHGITWNHLWY LAYLLPYTVALMALVSLARLVRLPALPPLPAAVAVPALLVLPILREAFCVMWVMPRHPPTHALVGDWFVHAESFPLFLLG YLLARNQRFWAWTVQLRWPTLGCALLAIGTELSIRYVGRHLPPAQLDALLASLPWDRIERIARSAYTWLALLTLLGWARH RLNRPYRWLPYCTEAVFPWYILHQSLIIVALYWLAPLHLNAWLEPALVIAATVVGCLALHEYVIRRVGWLRPLFGLHRSG ANGAQPLLATVKRST
Sequences:
>Translated_415_residues MQPLLHQPPTMTERRHDIDALRVFAFALLILYHVGMAYVADWGFHLKSVHTAEWLQWPMIVLNRWRMPLLFMISGIAIGL SQPQAAPWRFALRRCGRLLPPLLFGMFVVVAVQAYCQGVSNGKVATGFGSFLLRYWQVRPWPAGSFDGWEHGITWNHLWY LAYLLPYTVALMALVSLARLVRLPALPPLPAAVAVPALLVLPILREAFCVMWVMPRHPPTHALVGDWFVHAESFPLFLLG YLLARNQRFWAWTVQLRWPTLGCALLAIGTELSIRYVGRHLPPAQLDALLASLPWDRIERIARSAYTWLALLTLLGWARH RLNRPYRWLPYCTEAVFPWYILHQSLIIVALYWLAPLHLNAWLEPALVIAATVVGCLALHEYVIRRVGWLRPLFGLHRSG ANGAQPLLATVKRST >Mature_415_residues MQPLLHQPPTMTERRHDIDALRVFAFALLILYHVGMAYVADWGFHLKSVHTAEWLQWPMIVLNRWRMPLLFMISGIAIGL SQPQAAPWRFALRRCGRLLPPLLFGMFVVVAVQAYCQGVSNGKVATGFGSFLLRYWQVRPWPAGSFDGWEHGITWNHLWY LAYLLPYTVALMALVSLARLVRLPALPPLPAAVAVPALLVLPILREAFCVMWVMPRHPPTHALVGDWFVHAESFPLFLLG YLLARNQRFWAWTVQLRWPTLGCALLAIGTELSIRYVGRHLPPAQLDALLASLPWDRIERIARSAYTWLALLTLLGWARH RLNRPYRWLPYCTEAVFPWYILHQSLIIVALYWLAPLHLNAWLEPALVIAATVVGCLALHEYVIRRVGWLRPLFGLHRSG ANGAQPLLATVKRST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47386; Mature: 47386
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPLLHQPPTMTERRHDIDALRVFAFALLILYHVGMAYVADWGFHLKSVHTAEWLQWPMI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLNRWRMPLLFMISGIAIGLSQPQAAPWRFALRRCGRLLPPLLFGMFVVVAVQAYCQGVS HHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NGKVATGFGSFLLRYWQVRPWPAGSFDGWEHGITWNHLWYLAYLLPYTVALMALVSLARL CCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VRLPALPPLPAAVAVPALLVLPILREAFCVMWVMPRHPPTHALVGDWFVHAESFPLFLLG HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHH YLLARNQRFWAWTVQLRWPTLGCALLAIGTELSIRYVGRHLPPAQLDALLASLPWDRIER HHHHCCCCEEEEEEEEECCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHH IARSAYTWLALLTLLGWARHRLNRPYRWLPYCTEAVFPWYILHQSLIIVALYWLAPLHLN HHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWLEPALVIAATVVGCLALHEYVIRRVGWLRPLFGLHRSGANGAQPLLATVKRST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MQPLLHQPPTMTERRHDIDALRVFAFALLILYHVGMAYVADWGFHLKSVHTAEWLQWPMI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLNRWRMPLLFMISGIAIGLSQPQAAPWRFALRRCGRLLPPLLFGMFVVVAVQAYCQGVS HHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NGKVATGFGSFLLRYWQVRPWPAGSFDGWEHGITWNHLWYLAYLLPYTVALMALVSLARL CCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VRLPALPPLPAAVAVPALLVLPILREAFCVMWVMPRHPPTHALVGDWFVHAESFPLFLLG HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHH YLLARNQRFWAWTVQLRWPTLGCALLAIGTELSIRYVGRHLPPAQLDALLASLPWDRIER HHHHCCCCEEEEEEEEECCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHH IARSAYTWLALLTLLGWARHRLNRPYRWLPYCTEAVFPWYILHQSLIIVALYWLAPLHLN HHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWLEPALVIAATVVGCLALHEYVIRRVGWLRPLFGLHRSGANGAQPLLATVKRST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA