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The map label for this gene is 21242616

Identifier: 21242616

GI number: 21242616

Start: 2171679

End: 2172365

Strand: Reverse

Name: 21242616

Synonym: XAC1872

Alternate gene names: NA

Gene position: 2172365-2171679 (Counterclockwise)

Preceding gene: 21242617

Following gene: 21242615

Centisome position: 41.97

GC content: 59.83

Gene sequence:

>687_bases
ATGGAGGCCGCTGATGTGCAACGCCTTCGCGACCTGGAGACGGAGCACAGCAAGCTCAAACGCGTGTACGCCGAGCTGGC
GATGGAAAACCATGCATTGAAGGATGTCATCGTTAAAAAAGCTGTGGACCCGACGCACAAGCGGCCGCTTCTTGCCTGGC
TCGTCGAGCAGCATGGCTGGAGCGAGCGTCGGGCCTGTTCGGTCGTTGGCCTAGCTCGCTCAACAGCGCGCTATCGGTGT
CGTCCCGATCGCGACGAGGAGGTCATTGCGCTGTTGTCCGAATTGGCTGAGCGTTTCCCGAGCGTGGTTTTGGAAAGCTC
TTTCAGATCATCCGCCGTCGTGGACATGTATGGAATCACAAAAGGGTCTGGCGTGTGCGCCTTAGCGATCGAAGTGGACC
TGAATCTTCCAGCAGCCCGCGTCATCCGCACGTTGGAACGCAGCGCGGCCTGGCGCGGCTATCCGAACAAGCTTCGTTTG
GACAACGGGCCGGAATTTGTCGCGTTGGACTTGACCGAGTGGGCTGAAAGGTTTCATCGAACGCTTCAGCGGCAGCTACA
GGCGCGGCGTGCGGGACATGCATATATTCCGCGCGCTGAGCGAGGTCCGCGAACAGACCGAACACTGGCTTGCCGACTAC
AACCAACAGATCCCACACGACAGCCTGGGCGGACTAACGCCCGCTGA

Upstream 100 bases:

>100_bases
GCTGAAGCAGGTCGAGGGCGGTCGCCAGGTCAAGGATGTCTGTCACGAGCTGGGCATTTCCGAGGCGACTTACTACGTCT
GGAAGTCCAAGTACGACGGC

Downstream 100 bases:

>100_bases
GTTCCGTGATCAACATCAACCGCAGACCTCTAGTTTTGGCTGGCATTGAATTATGGGGAGTCGACATAGCGATAGCCTTC
CTTGCCCACCGCTTCGCCCA

Product: transposase

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Isxcc1 Transposase Orfb Protein; Isxcc1 Transposase Orfa Protein; ISxcC1 Transposase; Transposase Insk For Insertion Sequence Element Is; IS3 Family Element Transposase OrfB; ISxcc1 Transposase ORFB Fragment; Transposase Subfamily; Isxcc1 Transposase Orf B Protein

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MEAADVQRLRDLETEHSKLKRVYAELAMENHALKDVIVKKAVDPTHKRPLLAWLVEQHGWSERRACSVVGLARSTARYRC
RPDRDEEVIALLSELAERFPSVVLESSFRSSAVVDMYGITKGSGVCALAIEVDLNLPAARVIRTLERSAAWRGYPNKLRL
DNGPEFVALDLTEWAERFHRTLQRQLQARRAGHAYIPRAERGPRTDRTLACRLQPTDPTRQPGRTNAR

Sequences:

>Translated_228_residues
MEAADVQRLRDLETEHSKLKRVYAELAMENHALKDVIVKKAVDPTHKRPLLAWLVEQHGWSERRACSVVGLARSTARYRC
RPDRDEEVIALLSELAERFPSVVLESSFRSSAVVDMYGITKGSGVCALAIEVDLNLPAARVIRTLERSAAWRGYPNKLRL
DNGPEFVALDLTEWAERFHRTLQRQLQARRAGHAYIPRAERGPRTDRTLACRLQPTDPTRQPGRTNAR
>Mature_228_residues
MEAADVQRLRDLETEHSKLKRVYAELAMENHALKDVIVKKAVDPTHKRPLLAWLVEQHGWSERRACSVVGLARSTARYRC
RPDRDEEVIALLSELAERFPSVVLESSFRSSAVVDMYGITKGSGVCALAIEVDLNLPAARVIRTLERSAAWRGYPNKLRL
DNGPEFVALDLTEWAERFHRTLQRQLQARRAGHAYIPRAERGPRTDRTLACRLQPTDPTRQPGRTNAR

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25943; Mature: 25943

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAADVQRLRDLETEHSKLKRVYAELAMENHALKDVIVKKAVDPTHKRPLLAWLVEQHGW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
SERRACSVVGLARSTARYRCRPDRDEEVIALLSELAERFPSVVLESSFRSSAVVDMYGIT
CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
KGSGVCALAIEVDLNLPAARVIRTLERSAAWRGYPNKLRLDNGPEFVALDLTEWAERFHR
CCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEHHHHHHHHHH
TLQRQLQARRAGHAYIPRAERGPRTDRTLACRLQPTDPTRQPGRTNAR
HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MEAADVQRLRDLETEHSKLKRVYAELAMENHALKDVIVKKAVDPTHKRPLLAWLVEQHGW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
SERRACSVVGLARSTARYRCRPDRDEEVIALLSELAERFPSVVLESSFRSSAVVDMYGIT
CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
KGSGVCALAIEVDLNLPAARVIRTLERSAAWRGYPNKLRLDNGPEFVALDLTEWAERFHR
CCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEHHHHHHHHHH
TLQRQLQARRAGHAYIPRAERGPRTDRTLACRLQPTDPTRQPGRTNAR
HHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA