| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is hisA
Identifier: 21242577
GI number: 21242577
Start: 2128573
End: 2129307
Strand: Direct
Name: hisA
Synonym: XAC1833
Alternate gene names: 21242577
Gene position: 2128573-2129307 (Clockwise)
Preceding gene: 21242576
Following gene: 21242578
Centisome position: 41.13
GC content: 67.48
Gene sequence:
>735_bases ATGAGTTTCACCGTTTACCCGGCGCTGGATATCCGCAACGCTCGCGTGGTGCGCCTGCTGCAAGGCGATTACGCGCGCGA AACGCAGTACGGCGACGACGTGCTGCCGCGTGCGCAGGCATTCGCCGATGCCGGTGCGCAGTGGATGCATCTGGTCGATC TGGATGCGGCCAAGGCGGGCGGCTACACCCTGGCCGGCACACTCGGCGAGATTGCGCGAGCCACCGGCTTGCGCGTGCAG ACCGGCGGCGGTGTGCGCTCGCGCGAGGATGTGGCGCGCATCCTCGACGCAGGCGCCGCACGCGTGGTGATCGGCTCATT GGCAGTGCGCAATAGCGAGATGGTGGTTGGCTGGCTGCAGGAATTCGGCGCCGATCGCCTGACGATTGCGCTGGACACGC GCCAGGACGCCGATGGCATCTGGCAGTTGCCGGTGCACGGCTGGACCGAAGCTGCAGACGCCACGCTGGATCAATTGGCC GTGCGCTACGCGCGAGCCGGGCTGCAGCATTTGCTGTGTACCGACATTGCCCGCGACGGCATGCTGTCCGGCCCCAACAT GGCGCTGTACGGGCATTTGCGCGCGCTGACGCCGCAGTTGCAGGTGCAGGTCTCCGGGGGCGCGCGCAATCTGGCCGATG TCGCAGCTGCCAAGGCCGCGGGCTGCGCCGGCATCGTGCTGGGCAAGGCCTTGCTCGAAGGGCATCTGAATCTCGACGAG GCACTGGCATGCTGA
Upstream 100 bases:
>100_bases TGGTGCAGAACGGGCTGCGCTGCGGCGCGCAATTCCACCCTGAGCGTTCGGCCGAGACCGGTGCACGCATCCTGCGCAAT TTTCTTGAGATGAGCTTCCC
Downstream 100 bases:
>100_bases GCCGTCGCATCATTCCGTGCCTGGACGTGCGCGATGGGCGCGTGGTCAAGGGCGTCAAGTTCCGCGATCACATCGACATG GGCGACATCGTCGAACTGGC
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSFTVYPALDIRNARVVRLLQGDYARETQYGDDVLPRAQAFADAGAQWMHLVDLDAAKAGGYTLAGTLGEIARATGLRVQ TGGGVRSREDVARILDAGAARVVIGSLAVRNSEMVVGWLQEFGADRLTIALDTRQDADGIWQLPVHGWTEAADATLDQLA VRYARAGLQHLLCTDIARDGMLSGPNMALYGHLRALTPQLQVQVSGGARNLADVAAAKAAGCAGIVLGKALLEGHLNLDE ALAC
Sequences:
>Translated_244_residues MSFTVYPALDIRNARVVRLLQGDYARETQYGDDVLPRAQAFADAGAQWMHLVDLDAAKAGGYTLAGTLGEIARATGLRVQ TGGGVRSREDVARILDAGAARVVIGSLAVRNSEMVVGWLQEFGADRLTIALDTRQDADGIWQLPVHGWTEAADATLDQLA VRYARAGLQHLLCTDIARDGMLSGPNMALYGHLRALTPQLQVQVSGGARNLADVAAAKAAGCAGIVLGKALLEGHLNLDE ALAC >Mature_243_residues SFTVYPALDIRNARVVRLLQGDYARETQYGDDVLPRAQAFADAGAQWMHLVDLDAAKAGGYTLAGTLGEIARATGLRVQT GGGVRSREDVARILDAGAARVVIGSLAVRNSEMVVGWLQEFGADRLTIALDTRQDADGIWQLPVHGWTEAADATLDQLAV RYARAGLQHLLCTDIARDGMLSGPNMALYGHLRALTPQLQVQVSGGARNLADVAAAKAAGCAGIVLGKALLEGHLNLDEA LAC
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=240, Percent_Identity=47.9166666666667, Blast_Score=224, Evalue=3e-60, Organism=Escherichia coli, GI1788336, Length=134, Percent_Identity=27.6119402985075, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_XANAC (Q8PLG7)
Other databases:
- EMBL: AE008923 - RefSeq: NP_642159.1 - ProteinModelPortal: Q8PLG7 - GeneID: 1155904 - GenomeReviews: AE008923_GR - KEGG: xac:XAC1833 - NMPDR: fig|190486.1.peg.1803 - HOGENOM: HBG541613 - OMA: SIIYTDI - ProtClustDB: PRK00748 - BioCyc: XAXO190486:XAC1833-MONOMER - BRENDA: 5.3.1.16 - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 25800; Mature: 25668
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: ACT_SITE 10-10 ACT_SITE 132-132
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTVYPALDIRNARVVRLLQGDYARETQYGDDVLPRAQAFADAGAQWMHLVDLDAAKAG CCEEEEECEECCCCCEEEEHHCCCHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCC GYTLAGTLGEIARATGLRVQTGGGVRSREDVARILDAGAARVVIGSLAVRNSEMVVGWLQ CEEEEHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHH EFGADRLTIALDTRQDADGIWQLPVHGWTEAADATLDQLAVRYARAGLQHLLCTDIARDG HHCCCEEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MLSGPNMALYGHLRALTPQLQVQVSGGARNLADVAAAKAAGCAGIVLGKALLEGHLNLDE CCCCCCEEEEHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHH ALAC HHCC >Mature Secondary Structure SFTVYPALDIRNARVVRLLQGDYARETQYGDDVLPRAQAFADAGAQWMHLVDLDAAKAG CEEEEECEECCCCCEEEEHHCCCHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCC GYTLAGTLGEIARATGLRVQTGGGVRSREDVARILDAGAARVVIGSLAVRNSEMVVGWLQ CEEEEHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHH EFGADRLTIALDTRQDADGIWQLPVHGWTEAADATLDQLAVRYARAGLQHLLCTDIARDG HHCCCEEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MLSGPNMALYGHLRALTPQLQVQVSGGARNLADVAAAKAAGCAGIVLGKALLEGHLNLDE CCCCCCEEEEHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHH ALAC HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217