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The map label for this gene is ygeA [H]

Identifier: 21242547

GI number: 21242547

Start: 2075985

End: 2076689

Strand: Reverse

Name: ygeA [H]

Synonym: XAC1802

Alternate gene names: 21242547

Gene position: 2076689-2075985 (Counterclockwise)

Preceding gene: 21242548

Following gene: 21242546

Centisome position: 40.12

GC content: 65.25

Gene sequence:

>705_bases
ATGCCGGTTCCAAGCAAAACGATCGGTTTGATCGGTGGAATGAGCTGGGAATCCACGCTGCCCTACTACCGCATCATCAA
TCAGCGCGTCCGCCATGCATGCGGCGGCCTGCATTCGGCGAAACTGCTGCTGTATAGCGTCAATTTCCACGAGATCGAGC
GACTGCAGCACGCCGGCGATTGGGATGGCGCTGGCCAGGCGATGGCAGCCGCCGCGCGTGCGCTGCAGGCAGCAGGCGCC
GACTTCATCGTGCTGTGCACCAACACCATGCACTGCGTTGCCGACGCGATTACCGCCGCGACGCCACTGCCGCTGCTGCA
TATCGCCGATGCCACCGCCGACGCGCTCGTCGCAGCGGGCCTCAGCCGGATCGGATTGCTCGGCACGGGCTTCACCATGG
AGCAGCCGTTCTATCGCCAGCGCCTGCAGGCACGTGGCCTGGACGTGCTGGTGCCGCCGGCCGAAGCACGCGCGCAGCTG
CATCGCGTGATCTACGACGAACTCTGCCAGGGCGTGATCCAGCCCGAATCGCGCGAATACGTCTGCCAGGTCATGAACGA
ACTCGGCCAGCACGGTGCGCAAGCGATCATCCTGGGCTGCACCGAGATTTCGCTGCTGGTGAGCAGCACCGATGCGCAAC
TGCCGTTGTTCGACACCACCGCACTGCACGCCGAGGCAGCGGCGCTGGCGAGCGTGTCCGGCTGA

Upstream 100 bases:

>100_bases
TCCGGTCGGGACCGCCGACATACACTTCAGTCCCCAAGCGCAACGCACGCTGCGTGCCGTCGCTGTGCAACCTCATCCGC
TGTCCTGTCATGGAGTTCGC

Downstream 100 bases:

>100_bases
TTCGCAGCGAAGGCCCGGACGCGTGCGGCAACCGACGCCCGCAGGCGTGCTCGCACCAGGCCTGATAGGTGCCATCGGCA
TTTCATCGCCGAAAACGGCG

Product: resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MPVPSKTIGLIGGMSWESTLPYYRIINQRVRHACGGLHSAKLLLYSVNFHEIERLQHAGDWDGAGQAMAAAARALQAAGA
DFIVLCTNTMHCVADAITAATPLPLLHIADATADALVAAGLSRIGLLGTGFTMEQPFYRQRLQARGLDVLVPPAEARAQL
HRVIYDELCQGVIQPESREYVCQVMNELGQHGAQAIILGCTEISLLVSSTDAQLPLFDTTALHAEAAALASVSG

Sequences:

>Translated_234_residues
MPVPSKTIGLIGGMSWESTLPYYRIINQRVRHACGGLHSAKLLLYSVNFHEIERLQHAGDWDGAGQAMAAAARALQAAGA
DFIVLCTNTMHCVADAITAATPLPLLHIADATADALVAAGLSRIGLLGTGFTMEQPFYRQRLQARGLDVLVPPAEARAQL
HRVIYDELCQGVIQPESREYVCQVMNELGQHGAQAIILGCTEISLLVSSTDAQLPLFDTTALHAEAAALASVSG
>Mature_233_residues
PVPSKTIGLIGGMSWESTLPYYRIINQRVRHACGGLHSAKLLLYSVNFHEIERLQHAGDWDGAGQAMAAAARALQAAGAD
FIVLCTNTMHCVADAITAATPLPLLHIADATADALVAAGLSRIGLLGTGFTMEQPFYRQRLQARGLDVLVPPAEARAQLH
RVIYDELCQGVIQPESREYVCQVMNELGQHGAQAIILGCTEISLLVSSTDAQLPLFDTTALHAEAAALASVSG

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=223, Percent_Identity=56.0538116591928, Blast_Score=260, Evalue=6e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: NA

Molecular weight: Translated: 24925; Mature: 24794

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVPSKTIGLIGGMSWESTLPYYRIINQRVRHACGGLHSAKLLLYSVNFHEIERLQHAGD
CCCCCCHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCCCHHEEEEEECCHHHHHHHHHCCC
WDGAGQAMAAAARALQAAGADFIVLCTNTMHCVADAITAATPLPLLHIADATADALVAAG
CCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHH
LSRIGLLGTGFTMEQPFYRQRLQARGLDVLVPPAEARAQLHRVIYDELCQGVIQPESREY
HHHHHHEECCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHH
VCQVMNELGQHGAQAIILGCTEISLLVSSTDAQLPLFDTTALHAEAAALASVSG
HHHHHHHHHHCCCCEEEEEHHHHEEEEECCCCCCCEECHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PVPSKTIGLIGGMSWESTLPYYRIINQRVRHACGGLHSAKLLLYSVNFHEIERLQHAGD
CCCCCHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCCCHHEEEEEECCHHHHHHHHHCCC
WDGAGQAMAAAARALQAAGADFIVLCTNTMHCVADAITAATPLPLLHIADATADALVAAG
CCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHH
LSRIGLLGTGFTMEQPFYRQRLQARGLDVLVPPAEARAQLHRVIYDELCQGVIQPESREY
HHHHHHEECCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHH
VCQVMNELGQHGAQAIILGCTEISLLVSSTDAQLPLFDTTALHAEAAALASVSG
HHHHHHHHHHCCCCEEEEEHHHHEEEEECCCCCCCEECHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]