| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242524
Identifier: 21242524
GI number: 21242524
Start: 2047115
End: 2048653
Strand: Direct
Name: 21242524
Synonym: XAC1778
Alternate gene names: NA
Gene position: 2047115-2048653 (Clockwise)
Preceding gene: 77748611
Following gene: 21242526
Centisome position: 39.55
GC content: 52.89
Gene sequence:
>1539_bases ATGGCGGTAGCGAAAGAGCTTGTCAGGGGCATGCTGATCAGCGTGTGCTACTGCTTGGTATTTTTGATGCTTTGGCGTTT TTCCCTTGACCAGTGGTACCTGCCAGTTGGACTGCGGGTTGTCACTTTGCTTTATCGACCTTATCGAGAGTGGCCGTTTC TGTTGGTAGGGGACGCTGCTGCGATGCTTTTCCTGCGAATTCCTCTGGGCGAGCTGCAGGGGTTCAGTCCGCTCTGGTCG TACTTGAGCCCTCTATTGCATGCGCCCTTGATCGCCTGTGCGATTGGAGTGCTGCGTTACCGTGCTCCTTACATTGTCAA GAGGGAGCAATGGCTCATCCCCGCTGCTCTCGCGCTAGCACTTTGGAATGCGTTGTGCAGTCTGCTGTTGAATGGGTTGC TTGGTGGGCCGCAAATTTATCCTGTCATCGACCTGATGTTGCGATATGGGGCGGGCAGCTATCTCGGCGTGATTACCCTG TTGTTGCCGGTGATGTTGTGGGCCAATTGGAATGCCGGTCCGGTGCGCTCCAGTTTTCCGCGGGATGTTGCCATCGCCGT GGTTGTGATCCTCGGTCTGTTCTTCATTCTTGGCGTTTTGAATGATCCATCGATTCGAAACGTTTTGATGGTTGCGATGC TCGTGCCGATGGCTATACTGACTTTTAGGCATGGGTGGAAAGGGACTGCTTTAGGGGCGCTGCTGGCGAGTTTTTCGATT GAGTTCTCAATGCCCAAGGTGTATCAGGTCGGGTTTTTCGATCAAAATGTTTTTAATTTCCAACTGCTCTATGCAGTTGT AACGACGCTTCTGTTTATCTTCGATGCTCGTCTGCGTGAGCCTGTTCCCCACAGTAGATCGAATCAGTCCAACACTGATG TCTATGAATTTGCCCGTAAAAGCTACGCCAGCGCCGAGCGCTTGCTTCGAAATCGTGTGCTTGAATACACCGACATCAAT GTGCAGATCAATAGAATGCGCAAAGATGTGGTGGCCGATTTAAGGGCAAAAGGGCAGCATTCGGTTGCAATGGAGATGAC ACGAGTGAGCGTCATCGAATCGCAACTACTGCAGCAATACGTCGCCGCGCTGTATCCGCTTGAAATAGAAACCCATGGCT TGTATCAAGCGTTACGTTCGCCGGCGCTTGAGCGCTTCTGCGGTTCTCAGTTCGAGTGTGTGTTTCGCGGCAACTGTCGT AACTTGTCTTTGGAGATGCAGCTGAGCGCCTATCGCTGCGTTCTCAATTGCGTCGAGATTTTGCCTCCAGCGGGCAGGCA CTTTATCCAGGTGCGTGCATGGGCAGCAAGGGAGACTCGTGGTGTCGCGGTGCGTGTTATTGCTGATTCCTCATCGGCTG AAGCGGCTCGGCGCGACTTGAATGACGTCGAAGCTGAGCTAAAAGCAAGATTGAAAGCGCATGGCGGCATGTTTCATCGC CGCCATGCATTAGTTTTGACATTCCTGGTTACTGAGGCAAACCCCATGCAGGTCAGGGAGACACGATCCACTGATCCCCG GCTGCTTCGCGCCATGTGA
Upstream 100 bases:
>100_bases CCAAACCTGCAGCCTTTATCGCAATGTGTGCGCCATCGCTATACTCCATCCGGCAGTTCCCTCCAGACTAGGATGCATCG TGGAACCAAGGAGTGGTGGT
Downstream 100 bases:
>100_bases GCACTGTGAAATTTCTTGTCTTATAGACAAGTTGCGCTTGGTTGCGCTTGGTTGCATCGCTTCCAGTCGGCTCGTTCAAG CGTGCATCTGAGGAAATTTT
Product: sensor kinase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MAVAKELVRGMLISVCYCLVFLMLWRFSLDQWYLPVGLRVVTLLYRPYREWPFLLVGDAAAMLFLRIPLGELQGFSPLWS YLSPLLHAPLIACAIGVLRYRAPYIVKREQWLIPAALALALWNALCSLLLNGLLGGPQIYPVIDLMLRYGAGSYLGVITL LLPVMLWANWNAGPVRSSFPRDVAIAVVVILGLFFILGVLNDPSIRNVLMVAMLVPMAILTFRHGWKGTALGALLASFSI EFSMPKVYQVGFFDQNVFNFQLLYAVVTTLLFIFDARLREPVPHSRSNQSNTDVYEFARKSYASAERLLRNRVLEYTDIN VQINRMRKDVVADLRAKGQHSVAMEMTRVSVIESQLLQQYVAALYPLEIETHGLYQALRSPALERFCGSQFECVFRGNCR NLSLEMQLSAYRCVLNCVEILPPAGRHFIQVRAWAARETRGVAVRVIADSSSAEAARRDLNDVEAELKARLKAHGGMFHR RHALVLTFLVTEANPMQVRETRSTDPRLLRAM
Sequences:
>Translated_512_residues MAVAKELVRGMLISVCYCLVFLMLWRFSLDQWYLPVGLRVVTLLYRPYREWPFLLVGDAAAMLFLRIPLGELQGFSPLWS YLSPLLHAPLIACAIGVLRYRAPYIVKREQWLIPAALALALWNALCSLLLNGLLGGPQIYPVIDLMLRYGAGSYLGVITL LLPVMLWANWNAGPVRSSFPRDVAIAVVVILGLFFILGVLNDPSIRNVLMVAMLVPMAILTFRHGWKGTALGALLASFSI EFSMPKVYQVGFFDQNVFNFQLLYAVVTTLLFIFDARLREPVPHSRSNQSNTDVYEFARKSYASAERLLRNRVLEYTDIN VQINRMRKDVVADLRAKGQHSVAMEMTRVSVIESQLLQQYVAALYPLEIETHGLYQALRSPALERFCGSQFECVFRGNCR NLSLEMQLSAYRCVLNCVEILPPAGRHFIQVRAWAARETRGVAVRVIADSSSAEAARRDLNDVEAELKARLKAHGGMFHR RHALVLTFLVTEANPMQVRETRSTDPRLLRAM >Mature_511_residues AVAKELVRGMLISVCYCLVFLMLWRFSLDQWYLPVGLRVVTLLYRPYREWPFLLVGDAAAMLFLRIPLGELQGFSPLWSY LSPLLHAPLIACAIGVLRYRAPYIVKREQWLIPAALALALWNALCSLLLNGLLGGPQIYPVIDLMLRYGAGSYLGVITLL LPVMLWANWNAGPVRSSFPRDVAIAVVVILGLFFILGVLNDPSIRNVLMVAMLVPMAILTFRHGWKGTALGALLASFSIE FSMPKVYQVGFFDQNVFNFQLLYAVVTTLLFIFDARLREPVPHSRSNQSNTDVYEFARKSYASAERLLRNRVLEYTDINV QINRMRKDVVADLRAKGQHSVAMEMTRVSVIESQLLQQYVAALYPLEIETHGLYQALRSPALERFCGSQFECVFRGNCRN LSLEMQLSAYRCVLNCVEILPPAGRHFIQVRAWAARETRGVAVRVIADSSSAEAARRDLNDVEAELKARLKAHGGMFHRR HALVLTFLVTEANPMQVRETRSTDPRLLRAM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57882; Mature: 57751
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVAKELVRGMLISVCYCLVFLMLWRFSLDQWYLPVGLRVVTLLYRPYREWPFLLVGDAA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEHHH AMLFLRIPLGELQGFSPLWSYLSPLLHAPLIACAIGVLRYRAPYIVKREQWLIPAALALA HHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHH LWNALCSLLLNGLLGGPQIYPVIDLMLRYGAGSYLGVITLLLPVMLWANWNAGPVRSSFP HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC RDVAIAVVVILGLFFILGVLNDPSIRNVLMVAMLVPMAILTFRHGWKGTALGALLASFSI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH EFSMPKVYQVGFFDQNVFNFQLLYAVVTTLLFIFDARLREPVPHSRSNQSNTDVYEFARK EECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH SYASAERLLRNRVLEYTDINVQINRMRKDVVADLRAKGQHSVAMEMTRVSVIESQLLQQY HHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VAALYPLEIETHGLYQALRSPALERFCGSQFECVFRGNCRNLSLEMQLSAYRCVLNCVEI HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHH LPPAGRHFIQVRAWAARETRGVAVRVIADSSSAEAARRDLNDVEAELKARLKAHGGMFHR CCCCCCCEEEEEHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RHALVLTFLVTEANPMQVRETRSTDPRLLRAM HHHHHHHHHHCCCCCCHHHHCCCCCCHHHHCC >Mature Secondary Structure AVAKELVRGMLISVCYCLVFLMLWRFSLDQWYLPVGLRVVTLLYRPYREWPFLLVGDAA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEHHH AMLFLRIPLGELQGFSPLWSYLSPLLHAPLIACAIGVLRYRAPYIVKREQWLIPAALALA HHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHH LWNALCSLLLNGLLGGPQIYPVIDLMLRYGAGSYLGVITLLLPVMLWANWNAGPVRSSFP HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC RDVAIAVVVILGLFFILGVLNDPSIRNVLMVAMLVPMAILTFRHGWKGTALGALLASFSI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH EFSMPKVYQVGFFDQNVFNFQLLYAVVTTLLFIFDARLREPVPHSRSNQSNTDVYEFARK EECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH SYASAERLLRNRVLEYTDINVQINRMRKDVVADLRAKGQHSVAMEMTRVSVIESQLLQQY HHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VAALYPLEIETHGLYQALRSPALERFCGSQFECVFRGNCRNLSLEMQLSAYRCVLNCVEI HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHH LPPAGRHFIQVRAWAARETRGVAVRVIADSSSAEAARRDLNDVEAELKARLKAHGGMFHR CCCCCCCEEEEEHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RHALVLTFLVTEANPMQVRETRSTDPRLLRAM HHHHHHHHHHCCCCCCHHHHCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA