| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242507
Identifier: 21242507
GI number: 21242507
Start: 2018486
End: 2019004
Strand: Direct
Name: 21242507
Synonym: XAC1761
Alternate gene names: NA
Gene position: 2018486-2019004 (Clockwise)
Preceding gene: 21242506
Following gene: 21242513
Centisome position: 39.0
GC content: 68.98
Gene sequence:
>519_bases ATGCGTCATTCCGTTTCCCCCGTCCGCGTGCTGTCGCTCGCGTTGCTGGCGACCGCCACCGTCGCTGCCACGAGCGGTTG CAGCTGGTTTCACAAGGGCGCGCGCGGCGACTATGCGCTGGCCCCGGAAGCCCGCCCACTGGAAGTGCCGCCGGATCTGA ACCTGCCCGACACCTCCGGTGCGATGAAGGTGCCGACGCTGGCTTCGACCACCCAGCAGCAGACCAACACGCCGCCGTCG GCAAGCGCCAATAGCGGGTTCACCGTGCCGGGCGAGCGCGACGAGGTGTTCGGCAAGGTGGGCGCGGCATTGGCCGACAT CCCCGGCCTGACCATCGCCAGCAAGGCGCAGATGCTCGGTTCCTATGACGTGAGCTACGAGGGTTCCAGCTTCCTGGTGC GCGTGGTCAAGGTCGACGCCGGCAGTTACGTGTCGGCCGTGGACCCACGTGGCATGCCGGCGACGGCGGCAGCGCCGGTG GCGGTGATCGCTGCGCTCAAGGGCAAGCTGGGCGGCTGA
Upstream 100 bases:
>100_bases GCGCACCAGCCTGCCGCCGACCGCCTTGCCGCCGACGCCATTGCGTTGGAAGCGCTTTCCAGCCGCGAAATGCTCGCGGC CTGACCCAGGAGATCTATCG
Downstream 100 bases:
>100_bases GGCCGGTGCGGTTTGCTGGATAGCAAAACGGGCGCCTTGGGCGCCCGTTTTGCGTTAGTGCGGAGTTGATGGCAACTGCA TTGTGAGGTGCGGCAGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MRHSVSPVRVLSLALLATATVAATSGCSWFHKGARGDYALAPEARPLEVPPDLNLPDTSGAMKVPTLASTTQQQTNTPPS ASANSGFTVPGERDEVFGKVGAALADIPGLTIASKAQMLGSYDVSYEGSSFLVRVVKVDAGSYVSAVDPRGMPATAAAPV AVIAALKGKLGG
Sequences:
>Translated_172_residues MRHSVSPVRVLSLALLATATVAATSGCSWFHKGARGDYALAPEARPLEVPPDLNLPDTSGAMKVPTLASTTQQQTNTPPS ASANSGFTVPGERDEVFGKVGAALADIPGLTIASKAQMLGSYDVSYEGSSFLVRVVKVDAGSYVSAVDPRGMPATAAAPV AVIAALKGKLGG >Mature_172_residues MRHSVSPVRVLSLALLATATVAATSGCSWFHKGARGDYALAPEARPLEVPPDLNLPDTSGAMKVPTLASTTQQQTNTPPS ASANSGFTVPGERDEVFGKVGAALADIPGLTIASKAQMLGSYDVSYEGSSFLVRVVKVDAGSYVSAVDPRGMPATAAAPV AVIAALKGKLGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17466; Mature: 17466
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHSVSPVRVLSLALLATATVAATSGCSWFHKGARGDYALAPEARPLEVPPDLNLPDTSG CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCC AMKVPTLASTTQQQTNTPPSASANSGFTVPGERDEVFGKVGAALADIPGLTIASKAQMLG CEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHC SYDVSYEGSSFLVRVVKVDAGSYVSAVDPRGMPATAAAPVAVIAALKGKLGG CCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRHSVSPVRVLSLALLATATVAATSGCSWFHKGARGDYALAPEARPLEVPPDLNLPDTSG CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCC AMKVPTLASTTQQQTNTPPSASANSGFTVPGERDEVFGKVGAALADIPGLTIASKAQMLG CEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHC SYDVSYEGSSFLVRVVKVDAGSYVSAVDPRGMPATAAAPVAVIAALKGKLGG CCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA