| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242498
Identifier: 21242498
GI number: 21242498
Start: 2011773
End: 2012654
Strand: Reverse
Name: 21242498
Synonym: XAC1752
Alternate gene names: NA
Gene position: 2012654-2011773 (Counterclockwise)
Preceding gene: 21242499
Following gene: 21242495
Centisome position: 38.89
GC content: 66.33
Gene sequence:
>882_bases ATGAGCGTGCAGACCGACACCCTGCTCGCCAGCGCTGCAGATGGGCACCGCTGGCAAATCATCCGTTGCGCGCCGCCGCA CCCGACCGCAACGCTGCTGTGGCTGCCGGCATTGGGCGTGGCAGCGCGGCATTACCAACCGTTCGCACAAGCGCTCGCGT CCACCGGGGTTGCGGTGTATGTGCACGAATGGCGCGGCAATGGCAGCAGCACGCTGCGCCCGTCGCGTGAGCACGATTGG GGCTATCGCACGCTGCTTGCAGACGATCTCCCCGCCAGCCACGCCCTACTCGATATCCACGACCCGCAGCTGCCGCGCAT GATCGGTGGACACAGCCTTGGCGGTCAGCTCGCGTGCTGCTACGCCGCCCTGCATCCGGTGCAATTCGCCCAGCTCTGGC TGGTGGCCAGCGGCTCGCCGTACTGGCGCAATTTTCCCGGCCCCATGCGTTACGGCCTGCCCTTGGCGTTTCGGTTGTTG CCATGGCTGGCGCGCAGGCAGGGCGTACTGCACGGGCGCAAGCTCGGTTTTGGCGGCACCGAAGCACGCAGTCTGATTGC CGATTGGGCACAGGTCGGCCGCAGCAATCGCTATCGCGCGGCAGGCGCGCCATGGGATCTGGAACAGGCGCTGGGCCAAC TGCGCGTGCCGATCCGCGCAGTCACCCTTGCGCGCGACACGTGGGGCCCAGCAGATGCGCTGCGCGCATTACTCGACAAG ATGCCGCAAACACACCCACACCATGTGCGATTGGACGATGTGCACCTCGGCGCACGCAGCGATCATTTCGCCTGGATGAA AACGCCTGCGGCCGTGGTCGCTGCGCTGCGTCGCGCGCCTGACCACGACCGCAACGACGCTGGAATTTCACAAAGGGATT GA
Upstream 100 bases:
>100_bases AAGCGGCGATCGATTACGTTGCCCGCGCCATTCGCATCGGCCAACGCCCGGGCCAGAGCGATGTGCTGGTGCTCGACCAC TTCGGCGCCGCGCGCGGCGC
Downstream 100 bases:
>100_bases CGGACCCGTCGCTCATCCGCATAATTCCGCTCCTGACGAGGCGCCCGTAGCTCAGTTGGATAGAGTACCTGGCTACGAAC CAGGCGGTCGGGAGTTCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Fold; Hydrolase
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSVQTDTLLASAADGHRWQIIRCAPPHPTATLLWLPALGVAARHYQPFAQALASTGVAVYVHEWRGNGSSTLRPSREHDW GYRTLLADDLPASHALLDIHDPQLPRMIGGHSLGGQLACCYAALHPVQFAQLWLVASGSPYWRNFPGPMRYGLPLAFRLL PWLARRQGVLHGRKLGFGGTEARSLIADWAQVGRSNRYRAAGAPWDLEQALGQLRVPIRAVTLARDTWGPADALRALLDK MPQTHPHHVRLDDVHLGARSDHFAWMKTPAAVVAALRRAPDHDRNDAGISQRD
Sequences:
>Translated_293_residues MSVQTDTLLASAADGHRWQIIRCAPPHPTATLLWLPALGVAARHYQPFAQALASTGVAVYVHEWRGNGSSTLRPSREHDW GYRTLLADDLPASHALLDIHDPQLPRMIGGHSLGGQLACCYAALHPVQFAQLWLVASGSPYWRNFPGPMRYGLPLAFRLL PWLARRQGVLHGRKLGFGGTEARSLIADWAQVGRSNRYRAAGAPWDLEQALGQLRVPIRAVTLARDTWGPADALRALLDK MPQTHPHHVRLDDVHLGARSDHFAWMKTPAAVVAALRRAPDHDRNDAGISQRD >Mature_292_residues SVQTDTLLASAADGHRWQIIRCAPPHPTATLLWLPALGVAARHYQPFAQALASTGVAVYVHEWRGNGSSTLRPSREHDWG YRTLLADDLPASHALLDIHDPQLPRMIGGHSLGGQLACCYAALHPVQFAQLWLVASGSPYWRNFPGPMRYGLPLAFRLLP WLARRQGVLHGRKLGFGGTEARSLIADWAQVGRSNRYRAAGAPWDLEQALGQLRVPIRAVTLARDTWGPADALRALLDKM PQTHPHHVRLDDVHLGARSDHFAWMKTPAAVVAALRRAPDHDRNDAGISQRD
Specific function: Unknown
COG id: COG4757
COG function: function code R; Predicted alpha/beta hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32352; Mature: 32221
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVQTDTLLASAADGHRWQIIRCAPPHPTATLLWLPALGVAARHYQPFAQALASTGVAVY CCCCCCHHHEECCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEE VHEWRGNGSSTLRPSREHDWGYRTLLADDLPASHALLDIHDPQLPRMIGGHSLGGQLACC EEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCHHHCCCCCCCHHHHH YAALHPVQFAQLWLVASGSPYWRNFPGPMRYGLPLAFRLLPWLARRQGVLHGRKLGFGGT HHHHHHHHHEEEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCH EARSLIADWAQVGRSNRYRAAGAPWDLEQALGQLRVPIRAVTLARDTWGPADALRALLDK HHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHH MPQTHPHHVRLDDVHLGARSDHFAWMKTPAAVVAALRRAPDHDRNDAGISQRD CCCCCCCEEEEECEEECCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SVQTDTLLASAADGHRWQIIRCAPPHPTATLLWLPALGVAARHYQPFAQALASTGVAVY CCCCCHHHEECCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCEEEE VHEWRGNGSSTLRPSREHDWGYRTLLADDLPASHALLDIHDPQLPRMIGGHSLGGQLACC EEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCHHHCCCCCCCHHHHH YAALHPVQFAQLWLVASGSPYWRNFPGPMRYGLPLAFRLLPWLARRQGVLHGRKLGFGGT HHHHHHHHHEEEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCH EARSLIADWAQVGRSNRYRAAGAPWDLEQALGQLRVPIRAVTLARDTWGPADALRALLDK HHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHH MPQTHPHHVRLDDVHLGARSDHFAWMKTPAAVVAALRRAPDHDRNDAGISQRD CCCCCCCEEEEECEEECCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA