| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is dedA [C]
Identifier: 21242497
GI number: 21242497
Start: 2010323
End: 2011315
Strand: Direct
Name: dedA [C]
Synonym: XAC1749
Alternate gene names: 21242497
Gene position: 2010323-2011315 (Clockwise)
Preceding gene: 21242496
Following gene: 21242506
Centisome position: 38.84
GC content: 66.67
Gene sequence:
>993_bases ATGCAAGGCTTGATCGAACAGTACGGATTGGCGCTGGTGTTCGCCAACGTGCTGGCATTGTCGCTCGGGCTGCCGGTGCC AGCGTTGCCGACCCTGGTGCTGGTCGGCGCCAGCTATGCGTTGCAAGGTGGCAGCGATGCCTGGCTGGCCGGGCTTGCAG CGTTGGCGGTCTCTGTCGCGGCAAGTCTCTTGGGCGATCTGGTCTGGTATCTGGCCGGTCGCCGCTTCGGTAACCGCACC TTGCAGTCGCTGTGTCGGCTGTCGTTGTCGCGCGACAGCTGCATGAAGCAGACCGAGCGCTTTTTTTCGCGCTGGGGCGT GCGCGTGCTGGCGGTCGCCAAGTTCGTGCCGGGCCTGTCGATGGTCTCGGTGCCGATGGCCGGGGCAATGCGGGTACGTC CTGCGGCGTTCCTGCGATACGACGCCGTCGGTGCATCGTTGTGGGCATTGGTCGGCTTGAGTGTGGGTGCTGCGTTCGCG CCTCAGGTGCAGGACGTGCTTGCCTTGCTGTCCGAACTCGGCGCGGGCGCGATCGTGGTCTTGGCCGCGTTGCTGGCCGG CTATGTCGGTTGGCGCTGGTGGCGACGGCAGAGCCTGTTGCAATCGCTGGAGCATGCGCGCATCGCGGTAGACGAGTTGG TGCCGTTGCTGGCCGGCGAAGAAAGCCTGCGGCCGACCGTGCTGGATATCCGTGCCCCGGGCTATCGCCAGTTGCAGCCA TACACCATTCCTGGCGCCGTGTTCGCCGACGAGCGTCAGCTGGCGCAGATCCTTGCCAGCGTGCCGCGCGATCGCAGCGT GGTGATCTACTGTGCGTGTCCGGACGAGGTGTCTGCAGCATGGCTGGCTGCGCGGATGCGCGAGCGCGGGTACCGCGATG TGCGGCCACTGCTGGGTGGTCTGGACGCATGGCGCGATGCCGGGCACCCGGTGACATCGCTGGTGCCGGTGATGGTGGTT GCCGACGCGAACGCTGCTGCTGCCACGGCCTGA
Upstream 100 bases:
>100_bases TGCACGCCTTGGCCGCAACGTATCGTTCCGTCGCTGCCGGGCAGTCGCCGCTGTGAGGGAAGACGGATAATGGTCGCCCG CCATCGCGCAGGGTCGTCGC
Downstream 100 bases:
>100_bases TTGCGCGGGAGGCGGTGCGTGCGGTGACGGCGGCGCGCGTTCTGCTGAGAGATCGGCATCGCCCGACGGGCCGGCGCACT GCAATGCAACGCACTGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Transmembrane Protein; DedA Family Protein; DedA Protein; DedA-Like Transmembrane Protein; Thiosulfate Sulfurtransferase; Membrane-Associated Protein; Integral-Membrane Protein; Sulfate Permease Andrelated Transporter; Rhodanese-Like Protein; Sulfurtransferase DedA And GlpE Domains
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MQGLIEQYGLALVFANVLALSLGLPVPALPTLVLVGASYALQGGSDAWLAGLAALAVSVAASLLGDLVWYLAGRRFGNRT LQSLCRLSLSRDSCMKQTERFFSRWGVRVLAVAKFVPGLSMVSVPMAGAMRVRPAAFLRYDAVGASLWALVGLSVGAAFA PQVQDVLALLSELGAGAIVVLAALLAGYVGWRWWRRQSLLQSLEHARIAVDELVPLLAGEESLRPTVLDIRAPGYRQLQP YTIPGAVFADERQLAQILASVPRDRSVVIYCACPDEVSAAWLAARMRERGYRDVRPLLGGLDAWRDAGHPVTSLVPVMVV ADANAAAATA
Sequences:
>Translated_330_residues MQGLIEQYGLALVFANVLALSLGLPVPALPTLVLVGASYALQGGSDAWLAGLAALAVSVAASLLGDLVWYLAGRRFGNRT LQSLCRLSLSRDSCMKQTERFFSRWGVRVLAVAKFVPGLSMVSVPMAGAMRVRPAAFLRYDAVGASLWALVGLSVGAAFA PQVQDVLALLSELGAGAIVVLAALLAGYVGWRWWRRQSLLQSLEHARIAVDELVPLLAGEESLRPTVLDIRAPGYRQLQP YTIPGAVFADERQLAQILASVPRDRSVVIYCACPDEVSAAWLAARMRERGYRDVRPLLGGLDAWRDAGHPVTSLVPVMVV ADANAAAATA >Mature_330_residues MQGLIEQYGLALVFANVLALSLGLPVPALPTLVLVGASYALQGGSDAWLAGLAALAVSVAASLLGDLVWYLAGRRFGNRT LQSLCRLSLSRDSCMKQTERFFSRWGVRVLAVAKFVPGLSMVSVPMAGAMRVRPAAFLRYDAVGASLWALVGLSVGAAFA PQVQDVLALLSELGAGAIVVLAALLAGYVGWRWWRRQSLLQSLEHARIAVDELVPLLAGEESLRPTVLDIRAPGYRQLQP YTIPGAVFADERQLAQILASVPRDRSVVIYCACPDEVSAAWLAARMRERGYRDVRPLLGGLDAWRDAGHPVTSLVPVMVV ADANAAAATA
Specific function: Unknown
COG id: COG0586
COG function: function code S; Uncharacterized membrane-associated protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35214; Mature: 35214
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGLIEQYGLALVFANVLALSLGLPVPALPTLVLVGASYALQGGSDAWLAGLAALAVSVA CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ASLLGDLVWYLAGRRFGNRTLQSLCRLSLSRDSCMKQTERFFSRWGVRVLAVAKFVPGLS HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH MVSVPMAGAMRVRPAAFLRYDAVGASLWALVGLSVGAAFAPQVQDVLALLSELGAGAIVV HHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHH LAALLAGYVGWRWWRRQSLLQSLEHARIAVDELVPLLAGEESLRPTVLDIRAPGYRQLQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC YTIPGAVFADERQLAQILASVPRDRSVVIYCACPDEVSAAWLAARMRERGYRDVRPLLGG EECCCCHHHCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHH LDAWRDAGHPVTSLVPVMVVADANAAAATA HHHHHCCCCCHHHHHHHHHEECCCHHHCCC >Mature Secondary Structure MQGLIEQYGLALVFANVLALSLGLPVPALPTLVLVGASYALQGGSDAWLAGLAALAVSVA CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ASLLGDLVWYLAGRRFGNRTLQSLCRLSLSRDSCMKQTERFFSRWGVRVLAVAKFVPGLS HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH MVSVPMAGAMRVRPAAFLRYDAVGASLWALVGLSVGAAFAPQVQDVLALLSELGAGAIVV HHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHH LAALLAGYVGWRWWRRQSLLQSLEHARIAVDELVPLLAGEESLRPTVLDIRAPGYRQLQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC YTIPGAVFADERQLAQILASVPRDRSVVIYCACPDEVSAAWLAARMRERGYRDVRPLLGG EECCCCHHHCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHH LDAWRDAGHPVTSLVPVMVVADANAAAATA HHHHHCCCCCHHHHHHHHHEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA