| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is surE
Identifier: 21242474
GI number: 21242474
Start: 1985854
End: 1986633
Strand: Direct
Name: surE
Synonym: XAC1725
Alternate gene names: 21242474
Gene position: 1985854-1986633 (Clockwise)
Preceding gene: 21242472
Following gene: 21242475
Centisome position: 38.37
GC content: 67.56
Gene sequence:
>780_bases ATGCGCGTACTGGTTAGCAACGACGACGGTGTCGACGCCCCCGGCATCCAGGTTTTGGCCGAGGCGCTGCGCCATGCCGG TCATGAAGTGATGGTGGTCGCGCCCGACCGCGACCGCTCCGGCGCCAGCAATTCGCTCACGCTGGATGTGCCGATCCGCA CCCGCCGCATCGACGCGCAGACCTGCGCAGTGGCCGGCACGCCCACCGACTGCGTGCATCTGGCGCTCACCGGCATGCTC GATTACGACCCGGACATCGTGGTCTCCGGCATCAACAACTCGGCCAATCTGGGCGACGACGTGATCTATTCGGGCACCGT GTCGGCCGCAATGGAAGGCCGCTTCCTCGGCTTGCCGGCGGTGGCGGTGTCGCTGGTCACGCACAACCACCAAGCGCACA ACTACGACACCGCCGCGCGCGCTGCGGTGGAAATCGTGGCGCGGCTGAAGGCCGACCCGTTGCCTGCCGACACCATCCTC AACGTCAACGTGCCGGATCTGGCATGGTCGGATGTGCTCGGTTTCGAAGTCACCCGGCTCGGCAATCGCCACCGGTCCGA GCCGTGCGTGCCGCAGCGCGATCCGCGCGGCCACACCGTGTACTGGATCGGCCCGGCCGGTCCCGAGCAGGATGCTGGCG CCGGTACCGATTTCCACGCCGTGCGTACCGGACATATCTCGATCACGCCGATCCACGTCGATCTCACCCGTTACCAGGCA CTGGACACCGTTGCCGGCTGGGTGGGTGGGCTGACCGCAGCGCTGGACGGCCCGGCATGA
Upstream 100 bases:
>100_bases TTGGCACAGCGTACCCGGTCCAAGCGCAGACGCACGCGAAGATCAAGCGCGAAGGCGCGGGACGCATCCGGTATCATGGC CCGGTTTTCCGAGGAGTCCC
Downstream 100 bases:
>100_bases CGCCGAGGCTGCGCCTGCAACCGGAATCGGTCGGGATCGGCATGACCTCGCAGCGCGTGCGCGACCGCCTGGTCGAGCGC CTGCGCGAGGCCGGCATCCA
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MRVLVSNDDGVDAPGIQVLAEALRHAGHEVMVVAPDRDRSGASNSLTLDVPIRTRRIDAQTCAVAGTPTDCVHLALTGML DYDPDIVVSGINNSANLGDDVIYSGTVSAAMEGRFLGLPAVAVSLVTHNHQAHNYDTAARAAVEIVARLKADPLPADTIL NVNVPDLAWSDVLGFEVTRLGNRHRSEPCVPQRDPRGHTVYWIGPAGPEQDAGAGTDFHAVRTGHISITPIHVDLTRYQA LDTVAGWVGGLTAALDGPA
Sequences:
>Translated_259_residues MRVLVSNDDGVDAPGIQVLAEALRHAGHEVMVVAPDRDRSGASNSLTLDVPIRTRRIDAQTCAVAGTPTDCVHLALTGML DYDPDIVVSGINNSANLGDDVIYSGTVSAAMEGRFLGLPAVAVSLVTHNHQAHNYDTAARAAVEIVARLKADPLPADTIL NVNVPDLAWSDVLGFEVTRLGNRHRSEPCVPQRDPRGHTVYWIGPAGPEQDAGAGTDFHAVRTGHISITPIHVDLTRYQA LDTVAGWVGGLTAALDGPA >Mature_259_residues MRVLVSNDDGVDAPGIQVLAEALRHAGHEVMVVAPDRDRSGASNSLTLDVPIRTRRIDAQTCAVAGTPTDCVHLALTGML DYDPDIVVSGINNSANLGDDVIYSGTVSAAMEGRFLGLPAVAVSLVTHNHQAHNYDTAARAAVEIVARLKADPLPADTIL NVNVPDLAWSDVLGFEVTRLGNRHRSEPCVPQRDPRGHTVYWIGPAGPEQDAGAGTDFHAVRTGHISITPIHVDLTRYQA LDTVAGWVGGLTAALDGPA
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=249, Percent_Identity=58.2329317269076, Blast_Score=270, Evalue=1e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_XANAC (Q8PLR4)
Other databases:
- EMBL: AE008923 - RefSeq: NP_642056.1 - ProteinModelPortal: Q8PLR4 - SMR: Q8PLR4 - GeneID: 1155796 - GenomeReviews: AE008923_GR - KEGG: xac:XAC1725 - NMPDR: fig|190486.1.peg.1700 - HOGENOM: HBG600532 - OMA: SINVIYS - ProtClustDB: PRK00346 - BioCyc: XAXO190486:XAC1725-MONOMER - BRENDA: 3.1.3.5 - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5
Molecular weight: Translated: 27335; Mature: 27335
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLVSNDDGVDAPGIQVLAEALRHAGHEVMVVAPDRDRSGASNSLTLDVPIRTRRIDAQ CEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCH TCAVAGTPTDCVHLALTGMLDYDPDIVVSGINNSANLGDDVIYSGTVSAAMEGRFLGLPA HEEECCCCHHHHHEEECCCCCCCCCEEEECCCCCCCCCCCEEECCCHHHHHCCEEECCHH VAVSLVTHNHQAHNYDTAARAAVEIVARLKADPLPADTILNVNVPDLAWSDVLGFEVTRL HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHH GNRHRSEPCVPQRDPRGHTVYWIGPAGPEQDAGAGTDFHAVRTGHISITPIHVDLTRYQA CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEEEEHHHHHH LDTVAGWVGGLTAALDGPA HHHHHHHHHHHHEECCCCC >Mature Secondary Structure MRVLVSNDDGVDAPGIQVLAEALRHAGHEVMVVAPDRDRSGASNSLTLDVPIRTRRIDAQ CEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCH TCAVAGTPTDCVHLALTGMLDYDPDIVVSGINNSANLGDDVIYSGTVSAAMEGRFLGLPA HEEECCCCHHHHHEEECCCCCCCCCEEEECCCCCCCCCCCEEECCCHHHHHCCEEECCHH VAVSLVTHNHQAHNYDTAARAAVEIVARLKADPLPADTILNVNVPDLAWSDVLGFEVTRL HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHH GNRHRSEPCVPQRDPRGHTVYWIGPAGPEQDAGAGTDFHAVRTGHISITPIHVDLTRYQA CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEEEEHHHHHH LDTVAGWVGGLTAALDGPA HHHHHHHHHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217