| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is zipA [H]
Identifier: 21242374
GI number: 21242374
Start: 1870402
End: 1871133
Strand: Direct
Name: zipA [H]
Synonym: XAC1624
Alternate gene names: 21242374
Gene position: 1870402-1871133 (Clockwise)
Preceding gene: 21242373
Following gene: 21242375
Centisome position: 36.14
GC content: 64.34
Gene sequence:
>732_bases ATGTCCGACATGGCCATGATCCGGATCGGGATCCTGATCGCTGGACTGCTGCTGGTCGCGGCCATCTTCCTGTTTGGTCG CCCGAAGAAATCGCCGCAAGGGCGCCGGGTCGACAAGGGCGAGGGCCAGCCGCGTGAACGGCGCGAACCTGTGATTTCCA GCGAGTTCGGTGCGGAGGGCGACGCTGCAGAACGCGCAGAAGGCGTCGAGCAGAGCGAGCTCAATCTGGAAGGGCAGGAT GCTTCCGGCGGCAACGAGGTCGGCAAGCGCCCGAACCAGGATTTCGACAAGATCGTGTCGTTGTTCGTGGCCGCCAAGGC GGGCCAGGTGCTGCGCGGCGAAGATGTGGTGGTGGTGGCCGAGAAGACCGGGCTGGTGTTCGGCCACATGAACGTGTTCC ACCGCCTGGTGGAAGGCCATCCGGAACGCGGGCCGATCTTCAGCATGGCCAGCATCCTCAAGCCCGGCAGTTTCGACATG GCCAACATCCGCGAGATGCAGACACCGGCGATTGCGTTTTTCCTCACCTTGCCGGCGCCGATGACGGCGCTGGACGCCTG GGAAAAAATGCTGCCCACCGTGCAGCGCATGGCCGAACTGCTGGATGGCGTTGTATTGGACGACAGCCGCAATGCGTTGG GCCGCCAGCGTGTTGCGCACATCCGCGACGAACTACGCGCCTACGATCGCCAGCACCAAGCACCGCCGCTGACCAAGTCG CCGCGCTGGTGA
Upstream 100 bases:
>100_bases GCGTGGACCTGGAAGAGGCCGCACGTTTGGCGGGTGCGGCATGACGTGCCATGCTTGCCGGAATATCGACACCTGTCACT CTTATGCGGAGGCACGCTGA
Downstream 100 bases:
>100_bases GTTGACATGTTGAGCCTGCAGGGCGTGTTGGCGGTGGTGTTGCTGCTGGTGCTGTGGGCGATCTTGGCGATGCCGTTGTT GTGGATCTTTACCAGGATCG
Product: cell division protein ZipA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSDMAMIRIGILIAGLLLVAAIFLFGRPKKSPQGRRVDKGEGQPRERREPVISSEFGAEGDAAERAEGVEQSELNLEGQD ASGGNEVGKRPNQDFDKIVSLFVAAKAGQVLRGEDVVVVAEKTGLVFGHMNVFHRLVEGHPERGPIFSMASILKPGSFDM ANIREMQTPAIAFFLTLPAPMTALDAWEKMLPTVQRMAELLDGVVLDDSRNALGRQRVAHIRDELRAYDRQHQAPPLTKS PRW
Sequences:
>Translated_243_residues MSDMAMIRIGILIAGLLLVAAIFLFGRPKKSPQGRRVDKGEGQPRERREPVISSEFGAEGDAAERAEGVEQSELNLEGQD ASGGNEVGKRPNQDFDKIVSLFVAAKAGQVLRGEDVVVVAEKTGLVFGHMNVFHRLVEGHPERGPIFSMASILKPGSFDM ANIREMQTPAIAFFLTLPAPMTALDAWEKMLPTVQRMAELLDGVVLDDSRNALGRQRVAHIRDELRAYDRQHQAPPLTKS PRW >Mature_242_residues SDMAMIRIGILIAGLLLVAAIFLFGRPKKSPQGRRVDKGEGQPRERREPVISSEFGAEGDAAERAEGVEQSELNLEGQDA SGGNEVGKRPNQDFDKIVSLFVAAKAGQVLRGEDVVVVAEKTGLVFGHMNVFHRLVEGHPERGPIFSMASILKPGSFDMA NIREMQTPAIAFFLTLPAPMTALDAWEKMLPTVQRMAELLDGVVLDDSRNALGRQRVAHIRDELRAYDRQHQAPPLTKSP RW
Specific function: Interacts directly with the cell division protein FtsZ. Probable receptor for the septal ring structure, may anchor it to the inner-membrane [H]
COG id: COG3115
COG function: function code D; Cell division protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass type I membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZipA family [H]
Homologues:
Organism=Escherichia coli, GI1788752, Length=129, Percent_Identity=31.7829457364341, Blast_Score=81, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011919 - InterPro: IPR007449 - ProDom: PD035754 [H]
Pfam domain/function: PF04354 ZipA_C [H]
EC number: NA
Molecular weight: Translated: 26762; Mature: 26631
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDMAMIRIGILIAGLLLVAAIFLFGRPKKSPQGRRVDKGEGQPRERREPVISSEFGAEG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC DAAERAEGVEQSELNLEGQDASGGNEVGKRPNQDFDKIVSLFVAAKAGQVLRGEDVVVVA CHHHHHCCCCHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCEECCCCEEEEE EKTGLVFGHMNVFHRLVEGHPERGPIFSMASILKPGSFDMANIREMQTPAIAFFLTLPAP ECCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCC MTALDAWEKMLPTVQRMAELLDGVVLDDSRNALGRQRVAHIRDELRAYDRQHQAPPLTKS HHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PRW CCC >Mature Secondary Structure SDMAMIRIGILIAGLLLVAAIFLFGRPKKSPQGRRVDKGEGQPRERREPVISSEFGAEG CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC DAAERAEGVEQSELNLEGQDASGGNEVGKRPNQDFDKIVSLFVAAKAGQVLRGEDVVVVA CHHHHHCCCCHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCEECCCCEEEEE EKTGLVFGHMNVFHRLVEGHPERGPIFSMASILKPGSFDMANIREMQTPAIAFFLTLPAP ECCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCC MTALDAWEKMLPTVQRMAELLDGVVLDDSRNALGRQRVAHIRDELRAYDRQHQAPPLTKS HHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PRW CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA