| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242291
Identifier: 21242291
GI number: 21242291
Start: 1781246
End: 1782247
Strand: Direct
Name: 21242291
Synonym: XAC1540
Alternate gene names: NA
Gene position: 1781246-1782247 (Clockwise)
Preceding gene: 21242276
Following gene: 21242293
Centisome position: 34.42
GC content: 68.56
Gene sequence:
>1002_bases ATGGCGCGACCTGCACTTTATGGTAGAGCTCCCTGCGCTGTTCCGGCTGCCATGCGCCCGATCTTCGCTCGCCTCGCCTT TGCGATCTTTACCGCCGCGCTGCCCGCCGCCGCGCAGGATCCCGACTTCGCCGCGCAGGCGGCGGCGCTGTATCGCACCC CGCCTGCGATCGCCAGCTGCCGCGCCGGAGACCTGCAGCCGGCGCAGCGGCAACACGTGCTGGCGCTGATCAACGACATC CGTCGGCTGCACGGGCTCGACGCGGTCGACGACGACCCGGCGGCCGAGCCCGAAGCCACCCAGGCGGCCTTGGTGATTGC CGCCAACGGCCGCCTCAGCCATACGCCGACGCCGGACTGGCGCTGCTATTCCGACACTGCAGCCAAGGGCGCGCGCCGTA GCCTGATCTACGGCGGAGTCAGCTCGCCGCTGCTGCGTTTCTCCAGCGCCGAACAGATCGTGATCGAGTGGCTGACCGAC GCCAACAACGTCAGCGCCGGTGGACTGGGGCACCGGCGCTGGCTGCTGGATCCGTTTCTGCAACGCGTCGCCTTCGGCAT GGTGGCCGGTCGCGACGGCGCCACGTTCAGTAGCGGTGCCGCGCTGCGCTTCGTTCCGGCGGTCGGCGTCGCGGCGCGGA CGCGTGAGGATTTCATCGCCTGGCCGATCGGCGAGTACCCGGGCCGCTACTATTCCGACGATGCGCTGTTGTCGTTCACC GCATTGCCGGACCGCAAGCGCAAGTTCGCCAATCGCGATGTCGACTACGCCGATGCGCAGGTGCAGATCCGCGAGCGCGA TGGACGCCAGCTGCAGGTACGCAACCTGAGCGACGACCACGAAGGTTTCGGGGTGCCCAATAGCCTGCAGTTCCGGGTGC CGCGCCTGCAGCCGGGTGTGATCTACGACGTGACCATCCGCGGGGTGCGGTTCGGCGGGCAGTCGCGCGATTACCGTTAT TGGTTTCGCATCGGCCAATCGGCTCGCGCGTCCGCCGACTGA
Upstream 100 bases:
>100_bases GCCGAGGCTGCGGGCAGGCCCGGTGCCCTGCAAAACGGGTTCCCAAGCCCACGGCAGAATGGCTGAATGGCGGGCTACCT GCGCGGCAGAGGAGCCCGAC
Downstream 100 bases:
>100_bases ATCGACGGCATCAGCTGGCCGCGTCGACGGCTTCGCCCACCGGGCGCACCGTGACTGCCTGGATGCGATGGCCTGCCATG CGCCGCACGGTCAGCAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MARPALYGRAPCAVPAAMRPIFARLAFAIFTAALPAAAQDPDFAAQAAALYRTPPAIASCRAGDLQPAQRQHVLALINDI RRLHGLDAVDDDPAAEPEATQAALVIAANGRLSHTPTPDWRCYSDTAAKGARRSLIYGGVSSPLLRFSSAEQIVIEWLTD ANNVSAGGLGHRRWLLDPFLQRVAFGMVAGRDGATFSSGAALRFVPAVGVAARTREDFIAWPIGEYPGRYYSDDALLSFT ALPDRKRKFANRDVDYADAQVQIRERDGRQLQVRNLSDDHEGFGVPNSLQFRVPRLQPGVIYDVTIRGVRFGGQSRDYRY WFRIGQSARASAD
Sequences:
>Translated_333_residues MARPALYGRAPCAVPAAMRPIFARLAFAIFTAALPAAAQDPDFAAQAAALYRTPPAIASCRAGDLQPAQRQHVLALINDI RRLHGLDAVDDDPAAEPEATQAALVIAANGRLSHTPTPDWRCYSDTAAKGARRSLIYGGVSSPLLRFSSAEQIVIEWLTD ANNVSAGGLGHRRWLLDPFLQRVAFGMVAGRDGATFSSGAALRFVPAVGVAARTREDFIAWPIGEYPGRYYSDDALLSFT ALPDRKRKFANRDVDYADAQVQIRERDGRQLQVRNLSDDHEGFGVPNSLQFRVPRLQPGVIYDVTIRGVRFGGQSRDYRY WFRIGQSARASAD >Mature_332_residues ARPALYGRAPCAVPAAMRPIFARLAFAIFTAALPAAAQDPDFAAQAAALYRTPPAIASCRAGDLQPAQRQHVLALINDIR RLHGLDAVDDDPAAEPEATQAALVIAANGRLSHTPTPDWRCYSDTAAKGARRSLIYGGVSSPLLRFSSAEQIVIEWLTDA NNVSAGGLGHRRWLLDPFLQRVAFGMVAGRDGATFSSGAALRFVPAVGVAARTREDFIAWPIGEYPGRYYSDDALLSFTA LPDRKRKFANRDVDYADAQVQIRERDGRQLQVRNLSDDHEGFGVPNSLQFRVPRLQPGVIYDVTIRGVRFGGQSRDYRYW FRIGQSARASAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36412; Mature: 36281
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPALYGRAPCAVPAAMRPIFARLAFAIFTAALPAAAQDPDFAAQAAALYRTPPAIASC CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHCC RAGDLQPAQRQHVLALINDIRRLHGLDAVDDDPAAEPEATQAALVIAANGRLSHTPTPDW CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEECCCCCCCC RCYSDTAAKGARRSLIYGGVSSPLLRFSSAEQIVIEWLTDANNVSAGGLGHRRWLLDPFL EECCHHHHCCHHHEEEECCCCCHHHHHCCCHHEEHEEHHCCCCCCCCCCCCHHHHHHHHH QRVAFGMVAGRDGATFSSGAALRFVPAVGVAARTREDFIAWPIGEYPGRYYSDDALLSFT HHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHCCCCEEECCCCCCCCCEECCCCEEEEE ALPDRKRKFANRDVDYADAQVQIRERDGRQLQVRNLSDDHEGFGVPNSLQFRVPRLQPGV CCCHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCE IYDVTIRGVRFGGQSRDYRYWFRIGQSARASAD EEEEEEEEEEECCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure ARPALYGRAPCAVPAAMRPIFARLAFAIFTAALPAAAQDPDFAAQAAALYRTPPAIASC CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHCC RAGDLQPAQRQHVLALINDIRRLHGLDAVDDDPAAEPEATQAALVIAANGRLSHTPTPDW CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEECCCCCCCC RCYSDTAAKGARRSLIYGGVSSPLLRFSSAEQIVIEWLTDANNVSAGGLGHRRWLLDPFL EECCHHHHCCHHHEEEECCCCCHHHHHCCCHHEEHEEHHCCCCCCCCCCCCHHHHHHHHH QRVAFGMVAGRDGATFSSGAALRFVPAVGVAARTREDFIAWPIGEYPGRYYSDDALLSFT HHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHCCCCEEECCCCCCCCCEECCCCEEEEE ALPDRKRKFANRDVDYADAQVQIRERDGRQLQVRNLSDDHEGFGVPNSLQFRVPRLQPGV CCCHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCE IYDVTIRGVRFGGQSRDYRYWFRIGQSARASAD EEEEEEEEEEECCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA