| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is orf2
Identifier: 21242246
GI number: 21242246
Start: 1725797
End: 1726624
Strand: Direct
Name: orf2
Synonym: XAC1494
Alternate gene names: NA
Gene position: 1725797-1726624 (Clockwise)
Preceding gene: 21242245
Following gene: 21242247
Centisome position: 33.35
GC content: 49.64
Gene sequence:
>828_bases ATGGATAGCTACCGAAGACAGCAGATCGAAGCCAAAGCGCAGGACATGCTTAATGATGCAGGAGCGCTGTCACTCCCCAT CAATCCAATGGAGATTGCCAAGCACCTGGATATTCAAGTGCATGCGAAACCAGCCAATTCTTCTGGCGCGTCTGGATGGC TTGTGAGGCAAGGCAATAATTTTGCCATTATTTATGCTACCCACATCGAAAGTCCTGGGTTTCAGAATTTCAGCGTGGCC CATGAGCTAGGCCACTATTGTCTAGACGGCCATCCAGAACATATTTTTAAACAAAGTGAACAACATGCTTCTCGCGGTGG ATTCGGGTCTTCGGACCCCATCGAGCGAGAGGCAGATTATTTTGCGTCATGTTTAATGATGCCCAAGTCGCTGTGCAAGT CGATTGTTAATAAAAGCGGCGATGGCATGGTTGCCGTTTTATCATTGGCAGCCACATGTAATACGTCTTTAACAGCGGCA GCGCTGCGTTACGCAGAGATCGGGCATCTGCCCACGGGGGTTCTACAATGCTTAGACGGTAAAGTTGAGTTTTGTGCGAT TTATCCCCTTCAATCTCATGTGGGTTGGGCAAGACCGTTGGGACGCGGCTCAAAAGTTCCCCCGGATAGTGCGACACGAA GATTGGCTGACGATCCGGATGGCGTAAGACGGGCCTTAGAGGACAGTGATAGCGCGGAAGCAAGCGATTGGTTCTCTGGT GCCAAGAGCGGGATCTATCTCATCGAAGAGGTGATTGGACTAGGCTCTTTTGGCAGAACTTTGACGTTATTGACCTTGGA AGAAAATGACGAGGACGAGGATGATTAA
Upstream 100 bases:
>100_bases GCAGCATCAAGAATTGCTCGCCATTTGGGGCAAGCAACGGAAGACGACATCAAGATGCTTGAAGCCGTCGCTAAGTCATT AGCCGATACAAGGAAGAGGG
Downstream 100 bases:
>100_bases AGCTATGATGGTGTCTGTAATTATCTAAGATTGTCCCTCGTTTCATTTTTCAAACAAGGAGATTGTGATGGGTGGTTTTA AAAGTGGGAAAAAAAAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MDSYRRQQIEAKAQDMLNDAGALSLPINPMEIAKHLDIQVHAKPANSSGASGWLVRQGNNFAIIYATHIESPGFQNFSVA HELGHYCLDGHPEHIFKQSEQHASRGGFGSSDPIEREADYFASCLMMPKSLCKSIVNKSGDGMVAVLSLAATCNTSLTAA ALRYAEIGHLPTGVLQCLDGKVEFCAIYPLQSHVGWARPLGRGSKVPPDSATRRLADDPDGVRRALEDSDSAEASDWFSG AKSGIYLIEEVIGLGSFGRTLTLLTLEENDEDEDD
Sequences:
>Translated_275_residues MDSYRRQQIEAKAQDMLNDAGALSLPINPMEIAKHLDIQVHAKPANSSGASGWLVRQGNNFAIIYATHIESPGFQNFSVA HELGHYCLDGHPEHIFKQSEQHASRGGFGSSDPIEREADYFASCLMMPKSLCKSIVNKSGDGMVAVLSLAATCNTSLTAA ALRYAEIGHLPTGVLQCLDGKVEFCAIYPLQSHVGWARPLGRGSKVPPDSATRRLADDPDGVRRALEDSDSAEASDWFSG AKSGIYLIEEVIGLGSFGRTLTLLTLEENDEDEDD >Mature_275_residues MDSYRRQQIEAKAQDMLNDAGALSLPINPMEIAKHLDIQVHAKPANSSGASGWLVRQGNNFAIIYATHIESPGFQNFSVA HELGHYCLDGHPEHIFKQSEQHASRGGFGSSDPIEREADYFASCLMMPKSLCKSIVNKSGDGMVAVLSLAATCNTSLTAA ALRYAEIGHLPTGVLQCLDGKVEFCAIYPLQSHVGWARPLGRGSKVPPDSATRRLADDPDGVRRALEDSDSAEASDWFSG AKSGIYLIEEVIGLGSFGRTLTLLTLEENDEDEDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29764; Mature: 29764
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSYRRQQIEAKAQDMLNDAGALSLPINPMEIAKHLDIQVHAKPANSSGASGWLVRQGNN CCCHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHCCEEEEECCCCCCCCCCEEEEECCC FAIIYATHIESPGFQNFSVAHELGHYCLDGHPEHIFKQSEQHASRGGFGSSDPIEREADY EEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH FASCLMMPKSLCKSIVNKSGDGMVAVLSLAATCNTSLTAAALRYAEIGHLPTGVLQCLDG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCC KVEFCAIYPLQSHVGWARPLGRGSKVPPDSATRRLADDPDGVRRALEDSDSAEASDWFSG CEEEEEEEEHHHCCCHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHH AKSGIYLIEEVIGLGSFGRTLTLLTLEENDEDEDD CCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCC >Mature Secondary Structure MDSYRRQQIEAKAQDMLNDAGALSLPINPMEIAKHLDIQVHAKPANSSGASGWLVRQGNN CCCHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHCCEEEEECCCCCCCCCCEEEEECCC FAIIYATHIESPGFQNFSVAHELGHYCLDGHPEHIFKQSEQHASRGGFGSSDPIEREADY EEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH FASCLMMPKSLCKSIVNKSGDGMVAVLSLAATCNTSLTAAALRYAEIGHLPTGVLQCLDG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCC KVEFCAIYPLQSHVGWARPLGRGSKVPPDSATRRLADDPDGVRRALEDSDSAEASDWFSG CEEEEEEEEHHHCCCHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHH AKSGIYLIEEVIGLGSFGRTLTLLTLEENDEDEDD CCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA