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The map label for this gene is 21242245

Identifier: 21242245

GI number: 21242245

Start: 1725475

End: 1725804

Strand: Direct

Name: 21242245

Synonym: XAC1493

Alternate gene names: NA

Gene position: 1725475-1725804 (Clockwise)

Preceding gene: 21242243

Following gene: 21242246

Centisome position: 33.34

GC content: 52.42

Gene sequence:

>330_bases
ATGTCTGATCTCTTCCCAGCCCGTTTGAGAGAGGCCAGGGATAGGCGAGGTCTGACGCAAGCAGAACTGGGCAAGGAAGC
AAGTCTGCCGTCAACGACCATCTCCCACTTTGAAAGTGGATCAAGGAAGCCCTCGTTTGATAATTTGCGTCGTCTAACGA
AAGTTTTGGGCGTGAGCACCGACTACCTGATGGGTCTCGTTGACAGCCCCGATGACATGGCAGCAGCATCAAGAATTGCT
CGCCATTTGGGGCAAGCAACGGAAGACGACATCAAGATGCTTGAAGCCGTCGCTAAGTCATTAGCCGATACAAGGAAGAG
GGATGGATAG

Upstream 100 bases:

>100_bases
AAGAATTCCGACTACAAAGACTTGACGGAAGCGACAATACGCCCCCCTTGTCGACTTCGTCAAGTATGATTTGTCGCCCA
CCACAATTTAGGATTACCCG

Downstream 100 bases:

>100_bases
CTACCGAAGACAGCAGATCGAAGCCAAAGCGCAGGACATGCTTAATGATGCAGGAGCGCTGTCACTCCCCATCAATCCAA
TGGAGATTGCCAAGCACCTG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Repressor Of PBSX Genes; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSDLFPARLREARDRRGLTQAELGKEASLPSTTISHFESGSRKPSFDNLRRLTKVLGVSTDYLMGLVDSPDDMAAASRIA
RHLGQATEDDIKMLEAVAKSLADTRKRDG

Sequences:

>Translated_109_residues
MSDLFPARLREARDRRGLTQAELGKEASLPSTTISHFESGSRKPSFDNLRRLTKVLGVSTDYLMGLVDSPDDMAAASRIA
RHLGQATEDDIKMLEAVAKSLADTRKRDG
>Mature_108_residues
SDLFPARLREARDRRGLTQAELGKEASLPSTTISHFESGSRKPSFDNLRRLTKVLGVSTDYLMGLVDSPDDMAAASRIAR
HLGQATEDDIKMLEAVAKSLADTRKRDG

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11990; Mature: 11858

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLFPARLREARDRRGLTQAELGKEASLPSTTISHFESGSRKPSFDNLRRLTKVLGVST
CCCCCHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCH
DYLMGLVDSPDDMAAASRIARHLGQATEDDIKMLEAVAKSLADTRKRDG
HHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDLFPARLREARDRRGLTQAELGKEASLPSTTISHFESGSRKPSFDNLRRLTKVLGVST
CCCCHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCH
DYLMGLVDSPDDMAAASRIARHLGQATEDDIKMLEAVAKSLADTRKRDG
HHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA