| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242225
Identifier: 21242225
GI number: 21242225
Start: 1698094
End: 1700703
Strand: Direct
Name: 21242225
Synonym: XAC1473
Alternate gene names: NA
Gene position: 1698094-1700703 (Clockwise)
Preceding gene: 21242224
Following gene: 77748589
Centisome position: 32.81
GC content: 67.24
Gene sequence:
>2610_bases TTGATCAGCAAGGATGTGATGCGACGCCTGTTCGGCGTCTTCTGGACCATGTGTCTGCTGGTCGGCGCGAGCCTCGTGCC AGCACGGGCCAACGAGGCGCCACGCATGGCTCCGACGCCGGGCTGGGTGGTGGCAGATGCCGTTTCCGAGAACGTGCCCG GCGCTGCGGGGCTGCGCTACGAGCTGGTGTCAGACCAGGTCGATCTGACCGGCCGCGTGCCGCAGGCTTACCGCCGGCTC AGCTACACCGTGCAGCGCGCCAAGAGCTTGGAGGAAGCCGGGCAGATTTCCATCGACTATCAGCCGCAGTACCAGCAGCT GGAGCTCAACAGCCTGGATGTCTGGCGTGCCGGCAAGCGCATCGATATGCGCACGCAGGCGCATTACGCCAGATTGCGGC GCGAGAGCGGGCTGGAAAATGGGTTGATCGATGGCGCGCTGACGCTGTCGATCACCTTGCCGGACCTGCGCGTGGGCGGT CGCGTCGACTATGGCGTGACCATCAGCGGCAGCAATCCGGTGTTCGGCAAAGGCTATTACGACGTGTTCGAAGCGCGCTA CGGCGTGCCGCTGGGCGAGCGCCGGGTACGTGTGCGCTATCGGGCCGACATGCCGCTGCAGTGGCGCATCAGCGCCCCGG GGTTCGGCCGGAACGTGCGTACGCTCGATGGGGTGACGCAGTTGGACATCGGCGCCCGCAACATCGCGGCGGTGCAGGAA GAAAAAGACGCGCCGGACGATGTGGACCCGTATGGCGCGATCGAAGTGTCCACCGCCGGCAGTTGGGGCGCGGTGGCGGC CTGGGCGTCGCAGCTGTATCCGCGTGCATTCAACCAGACGCAGGTGGCCGCCAGGATGGCGCAGAGCCTGACGTTGCGTC GCGGCGACCCGCAAGGGGCGTTGCTGCGCGCCGTGGCGTTCGTGCAGGGCGAGATCCGTTACGTCGGGCTGGACATGGGA GAAAACTCGCACGCCCCGCACGCGCCCGAAGTGACGCTGCGCAACCGCTATGGCGACTGCAAGGACAAGGCGACGCTGCT GATCGCACTGCTGCAACTGGCCGGCATCCGCGCCGAGCCGGTGCTGGTCAACAGCGACAAGGGGCATGGGCTGGAAAAGC GGCTGCCCAGTCCGTACGCCTTCGATCATGTGGTGGTGCGTGCGCATCTGCCGCAGGGGGAGGTGTGGGTGGATGCCACG CGCGATCGCGAAGAGGGCCCGTTGGCACAGCGGCGGCCACTGCCGTTCGTGCGCGGATTGCCCGTGATTGCAGGGCAGGA CACGTTGGTTGAAGTGCCTGCGCCGATGCCCGCGTTGCCACAGATCGAAGTGAACGAAGAAATCTCCATTTCGCTGCGCA CGCCGCAGCGCTGGGCAAGCTTCACGGTGGACACCATCTATCGCCAGGGCCGCGGCGAGCGTGTCGCCAGCAGCTTCGAC GACGATGGTGCGCAGACGGTGGGCGAGCACTATCTGGAATTCATGCAGCAGTACTACACCGCACTGACCCAGGTGAGCGT GCCAAGCATCGACGCTGCCGACCCGCTGAATGTGCGCACGCACGAGGCCTACCGGCTGGAGTGGCCAGCGAAGGAGGGCG ATGAGCTGGGTTTCCCGTTGTTCCAGCTTGGCGAGTGGATGGATGCGTTACCGAAAGAGGCGCGCAAGAGCCCGCTGGCG CTGGGCGGGCCGCGGCTGGCGCGGCAGACCGTAAGCGTTCAAAGCGACCCGGCGACTCAGGTGGCAGCAGACACCCAAGT GGTCGCCAATCCGTGGTTCCGCTTCTCGCGCAGCATCGCGATGCGCGACGGAAAGCTGGTCATCGTGGGCGAGTGGCAGC GCTTCACCGACCGTATTCCGGCCAGCGGCGTGGCGCGTGCGGCTGCCGACATGGAACGCGCGCGCGACCTGCTGTATTTC AATCACGATCTCGCGCCGCGGCGGCGCACGCAGCCTCCGGACTGGCGTGCGCTCGGCTACCCTGTGGCCGGCTTGGCGGC CTTGGTGTTGTTGCTGGTGGCATGCTTTTTCTGGTGGCGCGGCGGTGGCCTGGGCGGAATCGTGTTCGATCCACATGCCA CGGTGACGCGGATGCCGCAGCATGCTCGGATGCGCCGGAGCGCCTTGGCGGTGTTTGCGGCCACCACGCTGCTGTCGGCG TGGGTGTGGCTGCATGCGCTGCCGCTCTGGGCCAAGGCCGGTGGGGTCAGTGTTGTGGTTGCAATCGCCTTGCTGGGATG CGTGTTGCTGAAGCAGATCCTGCGTTGGGTGGGCAGCAGCGCCCGGCTTGGGACGGTGTTGCCGGCAATGGCCGGCTGTG CGTTGCCGTGGCTGGTGTGCCTGCTGGCGGCCGTGGTCGCGCTCAAGGGCCAGGTCGCATTGCTGCGCATCGGCGCGACC GATCCGGCCGGCATGGCGCAACTGGCGACATGCATCCTGCTGCTGATGCTGGGGGCGCTGTGGTGGTCGGTCTGTTCGGT ACAGGCCGCCGCCGCCGCCGCCGGCTGTGCGCGCACGCGTGCGTTCGGCGCCTGGGCGCTGACGGTGGCGGCACTGGGCA TCCTGATCGCGGTATTGAGTGTGCCGGTGGCGGTAGTGGTCCTGGCCTGA
Upstream 100 bases:
>100_bases TGGAATCGGTGATCACCTACGAAGGCACCGAAACCGTGCACCAGCTGGTGGTGGGCCGTGCGCTGACAGGACTCAATGCG TTTTGACGAGGAGTGGGGGT
Downstream 100 bases:
>100_bases CGCAGGTCGGCGCGGCAGTGCACGCAAAGCTGGCATCGGTGCGTCGCTGCTGCGTGGAGGGCTTTGCAAAGGCACGCGGG GCTGTGACACTGCCAGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase Domain Protein; TPR Repeat-Containing Protein; Transglutaminase-Like Putative Cysteine Protease; Transglutaminase-Like Protein; Transglutaminase Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein
Number of amino acids: Translated: 869; Mature: 869
Protein sequence:
>869_residues MISKDVMRRLFGVFWTMCLLVGASLVPARANEAPRMAPTPGWVVADAVSENVPGAAGLRYELVSDQVDLTGRVPQAYRRL SYTVQRAKSLEEAGQISIDYQPQYQQLELNSLDVWRAGKRIDMRTQAHYARLRRESGLENGLIDGALTLSITLPDLRVGG RVDYGVTISGSNPVFGKGYYDVFEARYGVPLGERRVRVRYRADMPLQWRISAPGFGRNVRTLDGVTQLDIGARNIAAVQE EKDAPDDVDPYGAIEVSTAGSWGAVAAWASQLYPRAFNQTQVAARMAQSLTLRRGDPQGALLRAVAFVQGEIRYVGLDMG ENSHAPHAPEVTLRNRYGDCKDKATLLIALLQLAGIRAEPVLVNSDKGHGLEKRLPSPYAFDHVVVRAHLPQGEVWVDAT RDREEGPLAQRRPLPFVRGLPVIAGQDTLVEVPAPMPALPQIEVNEEISISLRTPQRWASFTVDTIYRQGRGERVASSFD DDGAQTVGEHYLEFMQQYYTALTQVSVPSIDAADPLNVRTHEAYRLEWPAKEGDELGFPLFQLGEWMDALPKEARKSPLA LGGPRLARQTVSVQSDPATQVAADTQVVANPWFRFSRSIAMRDGKLVIVGEWQRFTDRIPASGVARAAADMERARDLLYF NHDLAPRRRTQPPDWRALGYPVAGLAALVLLLVACFFWWRGGGLGGIVFDPHATVTRMPQHARMRRSALAVFAATTLLSA WVWLHALPLWAKAGGVSVVVAIALLGCVLLKQILRWVGSSARLGTVLPAMAGCALPWLVCLLAAVVALKGQVALLRIGAT DPAGMAQLATCILLLMLGALWWSVCSVQAAAAAAGCARTRAFGAWALTVAALGILIAVLSVPVAVVVLA
Sequences:
>Translated_869_residues MISKDVMRRLFGVFWTMCLLVGASLVPARANEAPRMAPTPGWVVADAVSENVPGAAGLRYELVSDQVDLTGRVPQAYRRL SYTVQRAKSLEEAGQISIDYQPQYQQLELNSLDVWRAGKRIDMRTQAHYARLRRESGLENGLIDGALTLSITLPDLRVGG RVDYGVTISGSNPVFGKGYYDVFEARYGVPLGERRVRVRYRADMPLQWRISAPGFGRNVRTLDGVTQLDIGARNIAAVQE EKDAPDDVDPYGAIEVSTAGSWGAVAAWASQLYPRAFNQTQVAARMAQSLTLRRGDPQGALLRAVAFVQGEIRYVGLDMG ENSHAPHAPEVTLRNRYGDCKDKATLLIALLQLAGIRAEPVLVNSDKGHGLEKRLPSPYAFDHVVVRAHLPQGEVWVDAT RDREEGPLAQRRPLPFVRGLPVIAGQDTLVEVPAPMPALPQIEVNEEISISLRTPQRWASFTVDTIYRQGRGERVASSFD DDGAQTVGEHYLEFMQQYYTALTQVSVPSIDAADPLNVRTHEAYRLEWPAKEGDELGFPLFQLGEWMDALPKEARKSPLA LGGPRLARQTVSVQSDPATQVAADTQVVANPWFRFSRSIAMRDGKLVIVGEWQRFTDRIPASGVARAAADMERARDLLYF NHDLAPRRRTQPPDWRALGYPVAGLAALVLLLVACFFWWRGGGLGGIVFDPHATVTRMPQHARMRRSALAVFAATTLLSA WVWLHALPLWAKAGGVSVVVAIALLGCVLLKQILRWVGSSARLGTVLPAMAGCALPWLVCLLAAVVALKGQVALLRIGAT DPAGMAQLATCILLLMLGALWWSVCSVQAAAAAAGCARTRAFGAWALTVAALGILIAVLSVPVAVVVLA >Mature_869_residues MISKDVMRRLFGVFWTMCLLVGASLVPARANEAPRMAPTPGWVVADAVSENVPGAAGLRYELVSDQVDLTGRVPQAYRRL SYTVQRAKSLEEAGQISIDYQPQYQQLELNSLDVWRAGKRIDMRTQAHYARLRRESGLENGLIDGALTLSITLPDLRVGG RVDYGVTISGSNPVFGKGYYDVFEARYGVPLGERRVRVRYRADMPLQWRISAPGFGRNVRTLDGVTQLDIGARNIAAVQE EKDAPDDVDPYGAIEVSTAGSWGAVAAWASQLYPRAFNQTQVAARMAQSLTLRRGDPQGALLRAVAFVQGEIRYVGLDMG ENSHAPHAPEVTLRNRYGDCKDKATLLIALLQLAGIRAEPVLVNSDKGHGLEKRLPSPYAFDHVVVRAHLPQGEVWVDAT RDREEGPLAQRRPLPFVRGLPVIAGQDTLVEVPAPMPALPQIEVNEEISISLRTPQRWASFTVDTIYRQGRGERVASSFD DDGAQTVGEHYLEFMQQYYTALTQVSVPSIDAADPLNVRTHEAYRLEWPAKEGDELGFPLFQLGEWMDALPKEARKSPLA LGGPRLARQTVSVQSDPATQVAADTQVVANPWFRFSRSIAMRDGKLVIVGEWQRFTDRIPASGVARAAADMERARDLLYF NHDLAPRRRTQPPDWRALGYPVAGLAALVLLLVACFFWWRGGGLGGIVFDPHATVTRMPQHARMRRSALAVFAATTLLSA WVWLHALPLWAKAGGVSVVVAIALLGCVLLKQILRWVGSSARLGTVLPAMAGCALPWLVCLLAAVVALKGQVALLRIGAT DPAGMAQLATCILLLMLGALWWSVCSVQAAAAAAGCARTRAFGAWALTVAALGILIAVLSVPVAVVVLA
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94743; Mature: 94743
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISKDVMRRLFGVFWTMCLLVGASLVPARANEAPRMAPTPGWVVADAVSENVPGAAGLRY CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCEE ELVSDQVDLTGRVPQAYRRLSYTVQRAKSLEEAGQISIDYQPQYQQLELNSLDVWRAGKR EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHEEECCCCHHHHCCCC IDMRTQAHYARLRRESGLENGLIDGALTLSITLPDLRVGGRVDYGVTISGSNPVFGKGYY CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEECCEEEEEEEECCCCCCCCCCHH DVFEARYGVPLGERRVRVRYRADMPLQWRISAPGFGRNVRTLDGVTQLDIGARNIAAVQE HHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCHHHCCCCEECCCCHHHHHHHH EKDAPDDVDPYGAIEVSTAGSWGAVAAWASQLYPRAFNQTQVAARMAQSLTLRRGDPQGA CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHH LLRAVAFVQGEIRYVGLDMGENSHAPHAPEVTLRNRYGDCKDKATLLIALLQLAGIRAEP HHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCC VLVNSDKGHGLEKRLPSPYAFDHVVVRAHLPQGEVWVDATRDREEGPLAQRRPLPFVRGL EEEECCCCCCHHHHCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHCC PVIAGQDTLVEVPAPMPALPQIEVNEEISISLRTPQRWASFTVDTIYRQGRGERVASSFD CEEECCCCEEECCCCCCCCCCEECCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHCCC DDGAQTVGEHYLEFMQQYYTALTQVSVPSIDAADPLNVRTHEAYRLEWPAKEGDELGFPL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCH FQLGEWMDALPKEARKSPLALGGPRLARQTVSVQSDPATQVAADTQVVANPWFRFSRSIA HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCHHHHCHHHHHHHHHE MRDGKLVIVGEWQRFTDRIPASGVARAAADMERARDLLYFNHDLAPRRRTQPPDWRALGY ECCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCC PVAGLAALVLLLVACFFWWRGGGLGGIVFDPHATVTRMPQHARMRRSALAVFAATTLLSA CHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH WVWLHALPLWAKAGGVSVVVAIALLGCVLLKQILRWVGSSARLGTVLPAMAGCALPWLVC HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LLAAVVALKGQVALLRIGATDPAGMAQLATCILLLMLGALWWSVCSVQAAAAAAGCARTR HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFGAWALTVAALGILIAVLSVPVAVVVLA HHHHHHHHHHHHHHHHHHHHHHHEEEEEC >Mature Secondary Structure MISKDVMRRLFGVFWTMCLLVGASLVPARANEAPRMAPTPGWVVADAVSENVPGAAGLRY CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCEE ELVSDQVDLTGRVPQAYRRLSYTVQRAKSLEEAGQISIDYQPQYQQLELNSLDVWRAGKR EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHEEECCCCHHHHCCCC IDMRTQAHYARLRRESGLENGLIDGALTLSITLPDLRVGGRVDYGVTISGSNPVFGKGYY CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEECCEEEEEEEECCCCCCCCCCHH DVFEARYGVPLGERRVRVRYRADMPLQWRISAPGFGRNVRTLDGVTQLDIGARNIAAVQE HHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCHHHCCCCEECCCCHHHHHHHH EKDAPDDVDPYGAIEVSTAGSWGAVAAWASQLYPRAFNQTQVAARMAQSLTLRRGDPQGA CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHH LLRAVAFVQGEIRYVGLDMGENSHAPHAPEVTLRNRYGDCKDKATLLIALLQLAGIRAEP HHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCC VLVNSDKGHGLEKRLPSPYAFDHVVVRAHLPQGEVWVDATRDREEGPLAQRRPLPFVRGL EEEECCCCCCHHHHCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHCC PVIAGQDTLVEVPAPMPALPQIEVNEEISISLRTPQRWASFTVDTIYRQGRGERVASSFD CEEECCCCEEECCCCCCCCCCEECCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHCCC DDGAQTVGEHYLEFMQQYYTALTQVSVPSIDAADPLNVRTHEAYRLEWPAKEGDELGFPL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCH FQLGEWMDALPKEARKSPLALGGPRLARQTVSVQSDPATQVAADTQVVANPWFRFSRSIA HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCHHHHCHHHHHHHHHE MRDGKLVIVGEWQRFTDRIPASGVARAAADMERARDLLYFNHDLAPRRRTQPPDWRALGY ECCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCC PVAGLAALVLLLVACFFWWRGGGLGGIVFDPHATVTRMPQHARMRRSALAVFAATTLLSA CHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH WVWLHALPLWAKAGGVSVVVAIALLGCVLLKQILRWVGSSARLGTVLPAMAGCALPWLVC HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LLAAVVALKGQVALLRIGATDPAGMAQLATCILLLMLGALWWSVCSVQAAAAAAGCARTR HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFGAWALTVAALGILIAVLSVPVAVVVLA HHHHHHHHHHHHHHHHHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA