| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is phnA [H]
Identifier: 21242113
GI number: 21242113
Start: 1568504
End: 1568839
Strand: Direct
Name: phnA [H]
Synonym: XAC1360
Alternate gene names: 21242113
Gene position: 1568504-1568839 (Clockwise)
Preceding gene: 21242108
Following gene: 21242116
Centisome position: 30.31
GC content: 61.31
Gene sequence:
>336_bases ATGCCTACCGTCCCCGCGTGTCCGCAATGCGGACTGGAGAACACCTATGTCGATGGCGCGATGTGGATCTGCGCCGATTG CGGCTTCGAATGGAGCGCGGGCGATGCCGCGGCAGACACGACGGTGGTGCGCGACAGCAACGGCAACGTGCTGCAGGCCG GCGACACGGTGACCGTGATCAAGGATCTCAAGGTCAAGGGCTCGTCGATTCCGCTCAAGCAGGGCACGGTGATCCGCAAT ATTCGCCTGGTCGAAGACGACGCCGAACACATCGAGGGCAACTCGGAAAAGATCAAGGGCCTGGTGTTGAAGACCTGTTT CCTGCGCAAGGCGTAA
Upstream 100 bases:
>100_bases GCATTCGACAAGCGCCGCACTATCGCGCCATCGCCGTGCCGGGTGCGTGATCGCGTGGCAGGGCGGCTACAATCCACGCC CGCTTCGATCGAGGAATTGC
Downstream 100 bases:
>100_bases GCGCGGTTGACCAATGGCGCTGCAGTGTGCGTTGGCGCGAAGTCAATGCGCGATGTTGCCCGAATGCGCAATGCACCTGC GGATAGGGCATTGCTGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MPTVPACPQCGLENTYVDGAMWICADCGFEWSAGDAAADTTVVRDSNGNVLQAGDTVTVIKDLKVKGSSIPLKQGTVIRN IRLVEDDAEHIEGNSEKIKGLVLKTCFLRKA
Sequences:
>Translated_111_residues MPTVPACPQCGLENTYVDGAMWICADCGFEWSAGDAAADTTVVRDSNGNVLQAGDTVTVIKDLKVKGSSIPLKQGTVIRN IRLVEDDAEHIEGNSEKIKGLVLKTCFLRKA >Mature_110_residues PTVPACPQCGLENTYVDGAMWICADCGFEWSAGDAAADTTVVRDSNGNVLQAGDTVTVIKDLKVKGSSIPLKQGTVIRNI RLVEDDAEHIEGNSEKIKGLVLKTCFLRKA
Specific function: Unknown
COG id: COG2824
COG function: function code P; Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790547, Length=110, Percent_Identity=47.2727272727273, Blast_Score=104, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004624 - InterPro: IPR013988 - InterPro: IPR013987 [H]
Pfam domain/function: PF03831 PhnA; PF08274 PhnA_Zn_Ribbon [H]
EC number: NA
Molecular weight: Translated: 11881; Mature: 11749
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTVPACPQCGLENTYVDGAMWICADCGFEWSAGDAAADTTVVRDSNGNVLQAGDTVTVI CCCCCCCCCCCCCCEEECCEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEECCCEEEEE KDLKVKGSSIPLKQGTVIRNIRLVEDDAEHIEGNSEKIKGLVLKTCFLRKA EEEEECCCCCCCCCCEEEEEEEEECCCHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure PTVPACPQCGLENTYVDGAMWICADCGFEWSAGDAAADTTVVRDSNGNVLQAGDTVTVI CCCCCCCCCCCCCEEECCEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEECCCEEEEE KDLKVKGSSIPLKQGTVIRNIRLVEDDAEHIEGNSEKIKGLVLKTCFLRKA EEEEECCCCCCCCCCEEEEEEEEECCCHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]